RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TSPY2A6NKD2 308 aa28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 TBC1D10BQ4KMP7 808 aaPredicted RBP28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 GTF3C6Q969F1 213 aa28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 CWC22Q9HCG8 908 aaKnown RBP28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 TNKSO95271 1327 aa28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 KLF18A0A0U1RQI7 1052 aa28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 WTAPQ15007 396 aa28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 KIF4BQ2VIQ3 1234 aa28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 ENAHQ8N8S7 591 aaPredicted RBP28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 IL17RBQ9NRM6 502 aa28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 PGAP2Q9UHJ9 254 aa28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 HPS5Q9UPZ3 1129 aa28.93■■■□□ 2.22
GTF2A1-201ENST00000298173 MYH8P13535 1937 aa28.92■■■□□ 2.22
GTF2A1-201ENST00000298173 ERICH2A1L162 156 aa28.92■■■□□ 2.22
GTF2A1-201ENST00000298173 SCRN1Q12765 414 aa28.92■■■□□ 2.22
GTF2A1-201ENST00000298173 STK3Q13188 491 aa28.92■■■□□ 2.22
GTF2A1-201ENST00000298173 DNAJC18Q9H819 358 aa28.92■■■□□ 2.22
GTF2A1-201ENST00000298173 VEZTQ9HBM0 779 aa28.92■■■□□ 2.22
GTF2A1-201ENST00000298173 SHMT1P34896 483 aa28.91■■■□□ 2.22
GTF2A1-201ENST00000298173 ZSCAN29Q8IWY8 852 aaPredicted RBP28.91■■■□□ 2.22
GTF2A1-201ENST00000298173 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.91■■■□□ 2.22
GTF2A1-201ENST00000298173 ZC3H4Q9UPT8 1303 aaKnown RBP28.9■■■□□ 2.22
GTF2A1-201ENST00000298173 EPS15P42566 896 aa28.9■■■□□ 2.22
GTF2A1-201ENST00000298173 APOA5Q6Q788 366 aa28.9■■■□□ 2.22
GTF2A1-201ENST00000298173 NEDD1Q8NHV4 660 aa28.9■■■□□ 2.22
GTF2A1-201ENST00000298173 ANKS1AQ92625 1134 aa28.9■■■□□ 2.22
GTF2A1-201ENST00000298173 NMT2O60551 498 aa28.89■■■□□ 2.22
GTF2A1-201ENST00000298173 RCSD1Q6JBY9 416 aa28.89■■■□□ 2.22
GTF2A1-201ENST00000298173 TSPY3P0CV98 308 aa28.89■■■□□ 2.21
GTF2A1-201ENST00000298173 TSPY8P0CW00 308 aa28.89■■■□□ 2.21
GTF2A1-201ENST00000298173 SLURP2P0DP57 97 aa28.89■■■□□ 2.21
GTF2A1-201ENST00000298173 CCDC178Q5BJE1 867 aa28.88■■■□□ 2.21
GTF2A1-201ENST00000298173 TATDN1Q6P1N9 297 aa28.88■■■□□ 2.21
GTF2A1-201ENST00000298173 DGKHQ86XP1 1220 aa28.88■■■□□ 2.21
GTF2A1-201ENST00000298173 TRPM4Q8TD43 1214 aa28.88■■■□□ 2.21
GTF2A1-201ENST00000298173 ASTN2O75129 1339 aaPredicted RBP28.87■■■□□ 2.21
GTF2A1-201ENST00000298173 CCDC69A6NI79 296 aa28.87■■■□□ 2.21
GTF2A1-201ENST00000298173 HIRAP54198 1017 aaPredicted RBP28.87■■■□□ 2.21
GTF2A1-201ENST00000298173 DPY19L2Q6NUT2 758 aa28.87■■■□□ 2.21
GTF2A1-201ENST00000298173 NFXL1Q6ZNB6 911 aa28.87■■■□□ 2.21
GTF2A1-201ENST00000298173 CSRNP1Q96S65 589 aa28.87■■■□□ 2.21
GTF2A1-201ENST00000298173 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.87■■■□□ 2.21
GTF2A1-201ENST00000298173 HACL1Q9UJ83 578 aa28.87■■■□□ 2.21
GTF2A1-201ENST00000298173 PLIN4Q96Q06 1357 aa28.87■■■□□ 2.21
GTF2A1-201ENST00000298173 NOVP48745 357 aa28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 CCT2P78371 535 aaKnown RBP28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 TMEM39BQ9GZU3 492 aa28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 CIZ1Q9ULV3 898 aaPredicted RBP28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 SLC12A7Q9Y666 1083 aa28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 GOLGA8BA8MQT2 603 aa28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 TNNI2P48788 182 aa28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 RCAN1P53805 252 aa28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 TNFAIP1Q13829 316 aa28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 IFIT1BQ5T764 474 aaKnown RBP28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 CRACR2BQ8N4Y2 399 aaPredicted RBP28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 L3MBTL3Q96JM7 780 aaPredicted RBP28.86■■■□□ 2.21
GTF2A1-201ENST00000298173 NID2Q14112 1375 aa28.85■■■□□ 2.21
GTF2A1-201ENST00000298173 ZBTB43O43298 467 aa28.85■■■□□ 2.21
GTF2A1-201ENST00000298173 CHMP4CQ96CF2 233 aa28.85■■■□□ 2.21
GTF2A1-201ENST00000298173 CCDC17Q96LX7 622 aa28.85■■■□□ 2.21
GTF2A1-201ENST00000298173 LLPHQ9BRT6 129 aaKnown RBP28.85■■■□□ 2.21
GTF2A1-201ENST00000298173 CHMP5Q9NZZ3 219 aa28.85■■■□□ 2.21
GTF2A1-201ENST00000298173 HERC5Q9UII4 1024 aaKnown RBP28.85■■■□□ 2.21
GTF2A1-201ENST00000298173 NAP1L2Q9ULW6 460 aaPredicted RBP28.85■■■□□ 2.21
GTF2A1-201ENST00000298173 GREB1LQ9C091 1923 aaPredicted RBP28.85■■■□□ 2.21
GTF2A1-201ENST00000298173 CTDNEP1O95476 244 aa28.84■■■□□ 2.21
GTF2A1-201ENST00000298173 AKR1B1P15121 316 aa28.84■■■□□ 2.21
GTF2A1-201ENST00000298173 MAP3K10Q02779 954 aa28.84■■■□□ 2.21
GTF2A1-201ENST00000298173 RASA3Q14644 834 aa28.84■■■□□ 2.21
GTF2A1-201ENST00000298173 TEPSINQ96N21 525 aa28.84■■■□□ 2.21
GTF2A1-201ENST00000298173 NCOA5Q9HCD5 579 aaKnown RBP28.84■■■□□ 2.21
GTF2A1-201ENST00000298173 IGKV6D-41A0A0C4DH26 115 aa28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 TBC1D12O60347 775 aa28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 CDAN1Q8IWY9 1227 aa28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 ZNF654Q8IZM8 581 aa28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 ADARB2Q9NS39 739 aaKnown RBP28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 FAM217BQ9NTX9 383 aaPredicted RBP28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 SMC3Q9UQE7 1217 aa28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 GLTPD2A6NH11 291 aa28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 FAM196BA6NMK8 535 aa28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 LMOD1P29536 600 aaPredicted RBP28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 SYNE3Q6ZMZ3 975 aa28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 SMARCC2Q8TAQ2 1214 aa28.83■■■□□ 2.21
GTF2A1-201ENST00000298173 METAP2P50579 478 aaKnown RBP eCLIP28.82■■■□□ 2.2
GTF2A1-201ENST00000298173 TROAPQ12815 778 aa28.82■■■□□ 2.2
GTF2A1-201ENST00000298173 RAB11FIP4Q86YS3 637 aa28.82■■■□□ 2.2
GTF2A1-201ENST00000298173 NSUN7Q8NE18 718 aaKnown RBP28.82■■■□□ 2.2
GTF2A1-201ENST00000298173 MYL10Q9BUA6 226 aa28.82■■■□□ 2.2
GTF2A1-201ENST00000298173 MICU3Q86XE3 530 aa28.81■■■□□ 2.2
GTF2A1-201ENST00000298173 DHX16O60231 1041 aaKnown RBP28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 RXRAP19793 462 aa28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 GJB2P29033 226 aa28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 CDC27P30260 824 aa28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 CERKLQ49MI3 558 aaPredicted RBP28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 ANGEL2Q5VTE6 544 aaKnown RBP28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 CEP95Q96GE4 821 aa28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 TRIM34Q9BYJ4 488 aa28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 SCAF8Q9UPN6 1271 aaKnown RBP28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 POLR2AP24928 1970 aaKnown RBP28.8■■■□□ 2.2
GTF2A1-201ENST00000298173 DTNBO60941 627 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms