RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 BAG1Q99933 345 aaPredicted RBP27.92■■■□□ 2.06
SPTSSA-201ENST00000298130 IRX2Q9BZI1 471 aaPredicted RBP27.91■■■□□ 2.06
SPTSSA-201ENST00000298130 RAI14Q9P0K7 980 aa27.91■■■□□ 2.06
SPTSSA-201ENST00000298130 STAG1Q8WVM7 1258 aa27.91■■■□□ 2.06
SPTSSA-201ENST00000298130 WASF1Q92558 559 aa27.91■■■□□ 2.06
SPTSSA-201ENST00000298130 STK36Q9NRP7 1315 aa27.91■■■□□ 2.06
SPTSSA-201ENST00000298130 A0A0U1RQJ8 604 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 TEX33O43247 280 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 DEXIO95424 95 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 GNG11P61952 73 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 DYNLL1P63167 89 aaKnown RBP27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 SLC4A8Q2Y0W8 1093 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 RILPL1Q5EBL4 403 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 MNS1Q8NEH6 495 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 ATRIPQ8WXE1 791 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 TNKSO95271 1327 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 ECM29Q5VYK3 1845 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 TC2NQ8N9U0 490 aa27.9■■■□□ 2.06
SPTSSA-201ENST00000298130 SEC31AO94979 1220 aaKnown RBP27.89■■■□□ 2.06
SPTSSA-201ENST00000298130 PLEKHA8P1O95397 391 aa27.89■■■□□ 2.06
SPTSSA-201ENST00000298130 SLFN14P0C7P3 912 aa27.89■■■□□ 2.06
SPTSSA-201ENST00000298130 UBXN4Q92575 508 aa27.89■■■□□ 2.06
SPTSSA-201ENST00000298130 CHRNDQ07001 517 aa27.89■■■□□ 2.06
SPTSSA-201ENST00000298130 BAZ2BQ9UIF8 2168 aaKnown RBP27.89■■■□□ 2.05
SPTSSA-201ENST00000298130 ACTN4O43707 911 aaKnown RBP27.88■■■□□ 2.05
SPTSSA-201ENST00000298130 FOXP1Q9H334 677 aaPredicted RBP27.88■■■□□ 2.05
SPTSSA-201ENST00000298130 PARP3Q9Y6F1 533 aa27.88■■■□□ 2.05
SPTSSA-201ENST00000298130 V9GY48 417 aaPredicted RBP27.88■■■□□ 2.05
SPTSSA-201ENST00000298130 H2AFXP16104 143 aaPredicted RBP27.88■■■□□ 2.05
SPTSSA-201ENST00000298130 MORC3Q14149 939 aa27.88■■■□□ 2.05
SPTSSA-201ENST00000298130 BCL9O00512 1426 aa27.88■■■□□ 2.05
SPTSSA-201ENST00000298130 IL6STP40189 918 aaPredicted RBP27.88■■■□□ 2.05
SPTSSA-201ENST00000298130 KCNJ6P48051 423 aa27.88■■■□□ 2.05
SPTSSA-201ENST00000298130 ZNF174Q15697 407 aa27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 SMIM5Q71RC9 77 aa27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 CD44P16070 742 aaKnown RBP27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 ZNF18P17022 549 aa27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 IGHMBP2P38935 993 aaKnown RBP27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 SPECC1LQ69YQ0 1117 aa27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 CREBRFQ8IUR6 639 aa27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 ZSWIM4Q9H7M6 989 aa27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 HOOK1Q9UJC3 728 aaKnown RBP27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 NIP7Q9Y221 180 aaKnown RBP eCLIP27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 SRPRBQ9Y5M8 271 aaKnown RBP27.87■■■□□ 2.05
SPTSSA-201ENST00000298130 EXOC5O00471 708 aa27.86■■■□□ 2.05
SPTSSA-201ENST00000298130 ARHGAP6O43182 974 aa27.86■■■□□ 2.05
SPTSSA-201ENST00000298130 SARSP49591 514 aaKnown RBP27.86■■■□□ 2.05
SPTSSA-201ENST00000298130 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.85■■■□□ 2.05
SPTSSA-201ENST00000298130 PHLPP2Q6ZVD8 1323 aa27.85■■■□□ 2.05
SPTSSA-201ENST00000298130 SOWAHDA6NJG2 315 aa27.85■■■□□ 2.05
SPTSSA-201ENST00000298130 ERVV-1B6SEH8 477 aa27.85■■■□□ 2.05
SPTSSA-201ENST00000298130 AKAP17AQ02040 695 aaKnown RBP27.85■■■□□ 2.05
SPTSSA-201ENST00000298130 TBX2Q13207 712 aaPredicted RBP27.85■■■□□ 2.05
SPTSSA-201ENST00000298130 NMT2O60551 498 aa27.85■■■□□ 2.05
SPTSSA-201ENST00000298130 ENAHQ8N8S7 591 aaPredicted RBP27.85■■■□□ 2.05
SPTSSA-201ENST00000298130 ERICH4A6NGS2 130 aa27.84■■■□□ 2.05
SPTSSA-201ENST00000298130 ATP6V1AP38606 617 aa27.84■■■□□ 2.05
SPTSSA-201ENST00000298130 TERF2Q15554 542 aa27.84■■■□□ 2.05
SPTSSA-201ENST00000298130 FHOD1Q9Y613 1164 aa27.84■■■□□ 2.05
SPTSSA-201ENST00000298130 PKN1Q16512 942 aa27.84■■■□□ 2.05
SPTSSA-201ENST00000298130 MLKLQ8NB16 471 aa27.84■■■□□ 2.05
SPTSSA-201ENST00000298130 SYMPKQ92797 1274 aaKnown RBP27.84■■■□□ 2.05
SPTSSA-201ENST00000298130 LZTFL1Q9NQ48 299 aa27.84■■■□□ 2.05
SPTSSA-201ENST00000298130 ZSCAN12O43309 604 aa27.83■■■□□ 2.05
SPTSSA-201ENST00000298130 INTS5Q6P9B9 1019 aaKnown RBP27.83■■■□□ 2.05
SPTSSA-201ENST00000298130 ENOX1Q8TC92 643 aaKnown RBP27.83■■■□□ 2.05
SPTSSA-201ENST00000298130 MRPL44Q9H9J2 332 aaKnown RBP27.83■■■□□ 2.05
SPTSSA-201ENST00000298130 JAG2Q9Y219 1238 aa27.83■■■□□ 2.05
SPTSSA-201ENST00000298130 ADAMTS3O15072 1205 aa27.83■■■□□ 2.05
SPTSSA-201ENST00000298130 VEGFAP15692 232 aaPredicted RBP27.83■■■□□ 2.05
SPTSSA-201ENST00000298130 CRKLP46109 303 aaKnown RBP27.83■■■□□ 2.05
SPTSSA-201ENST00000298130 BLZF1Q9H2G9 400 aa27.83■■■□□ 2.05
SPTSSA-201ENST00000298130 MAGEB6P1A0A0J9YX57 407 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 EIF5P55010 431 aaKnown RBP27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 C3orf67Q6ZVT6 689 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 MYH3P11055 1940 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 NUP98P52948 1817 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 CCDC196A0A1B0GTZ2 297 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 TRIM75PA6NK02 468 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 CCP110O43303 1012 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 CASQ1P31415 396 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 KCNQ4P56696 695 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 SEC23AQ15436 765 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 TEX35Q5T0J7 233 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 LRP6O75581 1613 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 TADA3O75528 432 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 CCDC152Q4G0S7 254 aa27.82■■■□□ 2.04
SPTSSA-201ENST00000298130 PNPLA7Q6ZV29 1317 aa27.81■■■□□ 2.04
SPTSSA-201ENST00000298130 GNAT2P19087 354 aa27.81■■■□□ 2.04
SPTSSA-201ENST00000298130 NT5DC1Q5TFE4 455 aa27.81■■■□□ 2.04
SPTSSA-201ENST00000298130 KIF20AO95235 890 aa27.81■■■□□ 2.04
SPTSSA-201ENST00000298130 GABPB1Q06547 395 aaPredicted RBP27.81■■■□□ 2.04
SPTSSA-201ENST00000298130 NUTM2AQ8IVF1 878 aaPredicted RBP27.81■■■□□ 2.04
SPTSSA-201ENST00000298130 ESR2Q92731 530 aa27.81■■■□□ 2.04
SPTSSA-201ENST00000298130 PNMA6AP0CW24 399 aaPredicted RBP27.8■■■□□ 2.04
SPTSSA-201ENST00000298130 RNF41Q9H4P4 317 aaPredicted RBP27.8■■■□□ 2.04
SPTSSA-201ENST00000298130 FAM53CQ9NYF3 392 aa27.8■■■□□ 2.04
SPTSSA-201ENST00000298130 ITGB4P16144 1822 aa27.8■■■□□ 2.04
SPTSSA-201ENST00000298130 CDC25AP30304 524 aa27.8■■■□□ 2.04
SPTSSA-201ENST00000298130 PLCD1P51178 756 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms