RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 NOD1Q9Y239 953 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 FLOT1O75955 427 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 TOMM70O94826 608 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 KIF20AO95235 890 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 CELF2O95319 508 aaKnown RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 STK38Q15208 465 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 TAF1CQ15572 869 aaPredicted RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 GNPTABQ3T906 1256 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 PARK7Q99497 189 aaKnown RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 BCL2L12Q9HB09 334 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 ZFYVE28Q9HCC9 887 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 KCNG1Q9UIX4 513 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 MRPL11Q9Y3B7 192 aaKnown RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 COL3A1P02461 1466 aaPredicted RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 MANSC4A6NHS7 340 aaPredicted RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 USP17L10C9JJH3 530 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 DDNO94850 711 aaPredicted RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 CHMLP26374 656 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 PPP1R2P41236 205 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 DIXDC1Q155Q3 683 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 SLFN13Q68D06 897 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 RCSD1Q6JBY9 416 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 NSMFQ6X4W1 530 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 ERO1BQ86YB8 467 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 HOMER1Q86YM7 354 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 IFNL3Q8IZI9 196 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 C8orf76Q96K31 380 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 VAT1LQ9HCJ6 419 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 CFAP45Q9UL16 551 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 KLF18A0A0U1RQI7 1052 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 FMNL1O95466 1100 aaPredicted RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 FOSP01100 380 aaPredicted RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 TRIM21P19474 475 aaKnown RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 ADD2P35612 726 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 MECOMQ03112 1051 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 PPARAQ07869 468 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 LARP1BQ659C4 914 aaKnown RBP3.56□□□□□ -1.84
HDX-201ENST00000297977 DPP9Q86TI2 863 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 DGKHQ86XP1 1220 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 SCLT1Q96NL6 688 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 GPRC5DQ9NZD1 345 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 CLIP2Q9UDT6 1046 aa3.56□□□□□ -1.84
HDX-201ENST00000297977 SGSM2O43147 1006 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 ARID4AP29374 1257 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 PRDX5P30044 214 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 ADORA1P30542 326 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 TUBB2AQ13885 445 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 CLEC17AQ6ZS10 378 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 GOLGA6L1Q8N7Z2 621 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 LPAR1Q92633 364 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 BRF1Q92994 677 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 TUBB2BQ9BVA1 445 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 ORC3Q9UBD5 711 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 ZNF70Q9UC06 446 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 WDR33Q9C0J8 1336 aaKnown RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 RRP9O43818 475 aaKnown RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 TTLL1O95922 423 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 NAPAP54920 295 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 PPP4CP60510 307 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 NCBP1Q09161 790 aaKnown RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 TSR1Q2NL82 804 aaKnown RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 DEFB115Q30KQ5 88 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 ZMYM1Q5SVZ6 1142 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 ANKRD35Q8N283 1001 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 CDHR1Q96JP9 859 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 PAIP2Q9BPZ3 127 aaKnown RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 TMEM106CQ9BVX2 250 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 TM6SF1Q9BZW5 370 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 LRRC27Q9C0I9 530 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 TCP11L1Q9NUJ3 509 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 RABGAP1Q9Y3P9 1069 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 UNCXA6NJT0 531 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 IL1R1P14778 569 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 GCLCP48506 637 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 GTF2A2P52657 109 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 SCARF1Q14162 830 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 ASPRV1Q53RT3 343 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 APBB1IPQ7Z5R6 666 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 NLRX1Q86UT6 975 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 CPXCR1Q8N123 301 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 FAM163AQ96GL9 167 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 ZDHHC15Q96MV8 337 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 PAGR1Q9BTK6 254 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 UPF3BQ9BZI7 483 aaKnown RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 TNNQ9UQP3 1299 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 ZBTB12Q9Y330 459 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 STK24Q9Y6E0 443 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 ZHX2Q9Y6X8 837 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 CXCL11O14625 94 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 CTNND1O60716 968 aaKnown RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 UBXN2AP68543 259 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 USP17L2Q6R6M4 530 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 MB21D1Q8N884 522 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 CEP120Q8N960 986 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 PRKAG2Q9UGJ0 569 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 DAGLAQ9Y4D2 1042 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 GPR75-ASB3A0A0A6YYF3 556 aa3.55□□□□□ -1.84
HDX-201ENST00000297977 KLRG2A4D1S0 409 aaPredicted RBP3.55□□□□□ -1.84
HDX-201ENST00000297977 GOLGA6L9A6NEM1 432 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms