RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 RILPL1Q5EBL4 403 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 KRT27Q7Z3Y8 459 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 SHISA4Q96DD7 197 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 BRIP1Q9BX63 1249 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 GNL3LQ9NVN8 582 aaKnown RBP22.75■■□□□ 1.23
NFIL3-201ENST00000297689 PAXBP1Q9Y5B6 917 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 PNOCQ13519 176 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 SAFBQ15424 915 aaKnown RBP eCLIP22.75■■□□□ 1.23
NFIL3-201ENST00000297689 NBPF5PQ86XG9 351 aaPredicted RBP22.75■■□□□ 1.23
NFIL3-201ENST00000297689 ANKRD7Q92527 254 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 ESR2Q92731 530 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 TOMM22Q9NS69 142 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 DUOX1Q9NRD9 1551 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 TPD52L1Q16890 204 aaPredicted RBP22.74■■□□□ 1.23
NFIL3-201ENST00000297689 FBXO33Q7Z6M2 555 aa22.74■■□□□ 1.23
NFIL3-201ENST00000297689 ZNF579Q8NAF0 562 aaKnown RBP22.74■■□□□ 1.23
NFIL3-201ENST00000297689 RNF26Q9BY78 433 aaPredicted RBP22.74■■□□□ 1.23
NFIL3-201ENST00000297689 ABCF2Q9UG63 623 aa22.74■■□□□ 1.23
NFIL3-201ENST00000297689 TNKSO95271 1327 aa22.74■■□□□ 1.23
NFIL3-201ENST00000297689 ARMCX5Q6P1M9 558 aa22.73■■□□□ 1.23
NFIL3-201ENST00000297689 LRRC4BQ9NT99 713 aa22.73■■□□□ 1.23
NFIL3-201ENST00000297689 RAI14Q9P0K7 980 aa22.73■■□□□ 1.23
NFIL3-201ENST00000297689 RGS17Q9UGC6 210 aaPredicted RBP22.73■■□□□ 1.23
NFIL3-201ENST00000297689 BMP6P22004 513 aa22.73■■□□□ 1.23
NFIL3-201ENST00000297689 FANCCQ00597 558 aa22.73■■□□□ 1.23
NFIL3-201ENST00000297689 CCAR2Q8N163 923 aaKnown RBP22.73■■□□□ 1.23
NFIL3-201ENST00000297689 CMTR1Q8N1G2 835 aaKnown RBP22.73■■□□□ 1.23
NFIL3-201ENST00000297689 UBAC1Q9BSL1 405 aa22.73■■□□□ 1.23
NFIL3-201ENST00000297689 BCL11BQ9C0K0 894 aaPredicted RBP22.73■■□□□ 1.23
NFIL3-201ENST00000297689 PCDHA5Q9Y5H7 936 aa22.73■■□□□ 1.23
NFIL3-201ENST00000297689 TNRC6CQ9HCJ0 1690 aaKnown RBP22.73■■□□□ 1.23
NFIL3-201ENST00000297689 KCNJ6P48051 423 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 TPM4P67936 248 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 GRIN1Q05586 938 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 NR5A1Q13285 461 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 SYCP1Q15431 976 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 PKN1Q16512 942 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 NT5DC1Q5TFE4 455 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 ENAHQ8N8S7 591 aaPredicted RBP22.72■■□□□ 1.23
NFIL3-201ENST00000297689 PDS5AQ29RF7 1337 aaKnown RBP22.72■■□□□ 1.23
NFIL3-201ENST00000297689 MYH2Q9UKX2 1941 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 DLEC1Q9Y238 1755 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 MINDY4BA8MYZ0 360 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 PCP11498 1178 aaKnown RBP22.72■■□□□ 1.23
NFIL3-201ENST00000297689 ISM2Q6H9L7 571 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 FAM196AQ6ZSG2 479 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 OXER1Q8TDS5 423 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 NLRP3Q96P20 1036 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 PCDHB6Q9Y5E3 794 aa22.72■■□□□ 1.23
NFIL3-201ENST00000297689 MYO1BO43795 1136 aa22.71■■□□□ 1.23
NFIL3-201ENST00000297689 ATP1A3P13637 1013 aa22.71■■□□□ 1.23
NFIL3-201ENST00000297689 TM4SF1P30408 202 aa22.71■■□□□ 1.23
NFIL3-201ENST00000297689 SARSP49591 514 aaKnown RBP22.71■■□□□ 1.23
NFIL3-201ENST00000297689 DYNLL1P63167 89 aaKnown RBP22.71■■□□□ 1.23
NFIL3-201ENST00000297689 MYL5Q02045 173 aa22.71■■□□□ 1.23
NFIL3-201ENST00000297689 DHX8Q14562 1220 aaKnown RBP22.71■■□□□ 1.23
NFIL3-201ENST00000297689 GLIPR1L2Q4G1C9 344 aa22.71■■□□□ 1.23
NFIL3-201ENST00000297689 CAVIN4Q5BKX8 364 aa22.71■■□□□ 1.23
NFIL3-201ENST00000297689 CCDC150Q8NCX0 1101 aa22.71■■□□□ 1.23
NFIL3-201ENST00000297689 CNNM3Q8NE01 707 aa22.71■■□□□ 1.23
NFIL3-201ENST00000297689 SRPRBQ9Y5M8 271 aaKnown RBP22.71■■□□□ 1.23
NFIL3-201ENST00000297689 MYH6P13533 1939 aa22.71■■□□□ 1.23
NFIL3-201ENST00000297689 BAZ2AQ9UIF9 1905 aaKnown RBP22.71■■□□□ 1.23
NFIL3-201ENST00000297689 SEMA3EO15041 775 aa22.7■■□□□ 1.23
NFIL3-201ENST00000297689 ZBTB22O15209 634 aa22.7■■□□□ 1.23
NFIL3-201ENST00000297689 SMC2O95347 1197 aa22.7■■□□□ 1.23
NFIL3-201ENST00000297689 LMOD1P29536 600 aaPredicted RBP22.7■■□□□ 1.23
NFIL3-201ENST00000297689 RPS8P62241 208 aaKnown RBP22.7■■□□□ 1.23
NFIL3-201ENST00000297689 TPTE2Q6XPS3 522 aa22.7■■□□□ 1.23
NFIL3-201ENST00000297689 CCDC82Q8N4S0 544 aa22.7■■□□□ 1.23
NFIL3-201ENST00000297689 ZSCAN10Q96SZ4 725 aaPredicted RBP22.7■■□□□ 1.23
NFIL3-201ENST00000297689 CEP135Q66GS9 1140 aa22.7■■□□□ 1.22
NFIL3-201ENST00000297689 NUP133Q8WUM0 1156 aa22.7■■□□□ 1.22
NFIL3-201ENST00000297689 FOXN1O15353 648 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 KLRK1P26718 216 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 TROAPQ12815 778 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 TRAPPC3LQ5T215 181 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 CTR9Q6PD62 1173 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 TMC6Q7Z403 805 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 TAOK2Q9UL54 1235 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.69■■□□□ 1.22
NFIL3-201ENST00000297689 PRPF3O43395 683 aaKnown RBP22.69■■□□□ 1.22
NFIL3-201ENST00000297689 RFC4P35249 363 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 SPECC1Q5M775 1068 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 E4F1Q66K89 784 aaPredicted RBP22.69■■□□□ 1.22
NFIL3-201ENST00000297689 NSUN4Q96CB9 384 aaKnown RBP22.69■■□□□ 1.22
NFIL3-201ENST00000297689 PHF20Q9BVI0 1012 aa22.69■■□□□ 1.22
NFIL3-201ENST00000297689 CYP2D7A0A087X1C5 515 aa22.68■■□□□ 1.22
NFIL3-201ENST00000297689 SPATA20Q8TB22 786 aa22.68■■□□□ 1.22
NFIL3-201ENST00000297689 RXRBP28702 533 aa22.67■■□□□ 1.22
NFIL3-201ENST00000297689 PDE4BQ07343 736 aa22.67■■□□□ 1.22
NFIL3-201ENST00000297689 PTPN14Q15678 1187 aa22.67■■□□□ 1.22
NFIL3-201ENST00000297689 DPF2Q92785 391 aa22.67■■□□□ 1.22
NFIL3-201ENST00000297689 NFIXQ14938 502 aa22.67■■□□□ 1.22
NFIL3-201ENST00000297689 UBR3Q6ZT12 1888 aa22.67■■□□□ 1.22
NFIL3-201ENST00000297689 NOL10Q9BSC4 688 aaKnown RBP22.67■■□□□ 1.22
NFIL3-201ENST00000297689 CCDC94Q9BW85 323 aaPredicted RBP22.67■■□□□ 1.22
NFIL3-201ENST00000297689 ACTN4O43707 911 aaKnown RBP22.66■■□□□ 1.22
NFIL3-201ENST00000297689 ORC4O43929 436 aa22.66■■□□□ 1.22
NFIL3-201ENST00000297689 NCBP1Q09161 790 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms