RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 DCAF17Q5H9S7 520 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-201ENST00000296794 PRDM15P57071 1507 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF28-201ENST00000296794 CCDC65Q8IXS2 484 aa17.95■□□□□ 0.46
ARHGEF28-201ENST00000296794 SECISBP2LQ93073 1101 aaKnown RBP17.95■□□□□ 0.46
ARHGEF28-201ENST00000296794 HSPD1P10809 573 aaKnown RBP17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 ACTN2P35609 894 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 MROH5Q6ZUA9 1318 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 AATKQ6ZMQ8 1374 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 ECM2O94769 699 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 GRIPAP1Q4V328 841 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 HAUS7Q99871 368 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 BACH1O14867 736 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 CCDC114Q96M63 670 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 HOMER2Q9NSB8 354 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 PPP2R5BQ15173 497 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 SPATA5Q8NB90 893 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 NUP58Q9BVL2 599 aa17.94■□□□□ 0.46
ARHGEF28-201ENST00000296794 ZNF853P0CG23 659 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 CEP57Q86XR8 500 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 UBLCP1Q8WVY7 318 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 NELFBQ8WX92 580 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 IMPG2Q9BZV3 1241 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 NRBP1Q9UHY1 535 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 GOLGA6CA6NDK9 693 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 GOLGA6DP0CG33 693 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 CMA1P23946 247 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 FBF1Q8TES7 1133 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 GOLGA6AQ9NYA3 693 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 VPS54Q9P1Q0 977 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 ADCY9O60503 1353 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 NPHP4O75161 1426 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 PPIP5K2O43314 1243 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 CCNT1O60563 726 aaKnown RBP17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 TDRD7Q8NHU6 1098 aaKnown RBP17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 NAP1L4Q99733 375 aaKnown RBP17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 BLZF1Q9H2G9 400 aa17.93■□□□□ 0.46
ARHGEF28-201ENST00000296794 RPL13P26373 211 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 ETF1P62495 437 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 SCRN1Q12765 414 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 UTP14CQ5TAP6 766 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 GPR161Q8N6U8 529 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 IVNS1ABPQ9Y6Y0 642 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 GJC1P36383 396 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 NDUFA8P51970 172 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 MTRF1LQ9UGC7 380 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 PLEKHG1Q9ULL1 1385 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 CLASP1Q7Z460 1538 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 DLGAP5Q15398 846 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 DESI2Q9BSY9 194 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 ADD1P35611 737 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 RNASE9P60153 205 aaKnown RBP17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 MAP3K9P80192 1104 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 AKNAD1Q5T1N1 836 aa17.92■□□□□ 0.46
ARHGEF28-201ENST00000296794 H7C1D1 291 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 TXKP42681 527 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 NOSTRINQ8IVI9 506 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 BCS1LQ9Y276 419 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 HPDP32754 393 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 CCDC25Q86WR0 208 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 NDUFAB1O14561 156 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 TTC14Q96N46 770 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 NOX5Q96PH1 765 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.91■□□□□ 0.461e-7■■□□□ 13.5
ARHGEF28-201ENST00000296794 GPR162Q16538 588 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 C6orf163Q5TEZ5 329 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 PPP2R2CQ9Y2T4 447 aa17.91■□□□□ 0.46
ARHGEF28-201ENST00000296794 PDIA3P30101 505 aaKnown RBP17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 CA8P35219 290 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 BRDTQ58F21 947 aaPredicted RBP17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 GSTA5Q7RTV2 222 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 ERBB4Q15303 1308 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 VWA3BQ502W6 1294 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 CCDC26Q8TAB7 109 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 CARD10Q9BWT7 1032 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 UGGT1Q9NYU2 1555 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 GOLGA6BA6NDN3 693 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 EEF2P13639 858 aaKnown RBP17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 RBM6P78332 1123 aaKnown RBP17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 FERMT1Q9BQL6 677 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 BEGAINQ9BUH8 593 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 FANCLQ9NW38 375 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 AATFQ9NY61 560 aaKnown RBP eCLIP17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 SAMD9LQ8IVG5 1584 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 MAGEA1P43355 309 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 SP4Q02446 784 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 GPIHBP1Q8IV16 184 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 GPCPD1Q9NPB8 672 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 TLR7Q9NYK1 1049 aaKnown RBP17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 CLIC4Q9Y696 253 aa17.9■□□□□ 0.46
ARHGEF28-201ENST00000296794 LOC102724428A0A0B4J2F2 783 aa17.89■□□□□ 0.46
ARHGEF28-201ENST00000296794 SIK1P57059 783 aa17.89■□□□□ 0.46
ARHGEF28-201ENST00000296794 ZNF827Q17R98 1081 aa17.89■□□□□ 0.46
ARHGEF28-201ENST00000296794 PPP1R14CQ8TAE6 165 aa17.89■□□□□ 0.46
ARHGEF28-201ENST00000296794 CCDC97Q96F63 343 aaPredicted RBP17.89■□□□□ 0.46
ARHGEF28-201ENST00000296794 PSMB7Q99436 277 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms