RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 SHROOM1Q2M3G4 852 aaPredicted RBP23.93■■□□□ 1.42
CXCL3-201ENST00000296026 AACSQ86V21 672 aa23.93■■□□□ 1.42
CXCL3-201ENST00000296026 ERC1Q8IUD2 1116 aa23.93■■□□□ 1.42
CXCL3-201ENST00000296026 UBE2Q1Q7Z7E8 422 aa23.92■■□□□ 1.42
CXCL3-201ENST00000296026 MAGEB6Q8N7X4 407 aa23.92■■□□□ 1.42
CXCL3-201ENST00000296026 DPF3Q92784 378 aa23.92■■□□□ 1.42
CXCL3-201ENST00000296026 ANTXR1Q9H6X2 564 aa23.92■■□□□ 1.42
CXCL3-201ENST00000296026 GINM1Q9NU53 330 aa23.92■■□□□ 1.42
CXCL3-201ENST00000296026 TMOD4Q9NZQ9 345 aa23.92■■□□□ 1.42
CXCL3-201ENST00000296026 SGPL1O95470 568 aa23.91■■□□□ 1.42
CXCL3-201ENST00000296026 CERS3Q8IU89 383 aa23.91■■□□□ 1.42
CXCL3-201ENST00000296026 ZBTB21Q9ULJ3 1066 aa23.91■■□□□ 1.42
CXCL3-201ENST00000296026 COLQQ9Y215 455 aaPredicted RBP23.91■■□□□ 1.42
CXCL3-201ENST00000296026 DOCK3Q8IZD9 2030 aa23.9■■□□□ 1.42
CXCL3-201ENST00000296026 C19orf81C9J6K1 198 aa23.9■■□□□ 1.42
CXCL3-201ENST00000296026 USP17L10C9JJH3 530 aa23.9■■□□□ 1.42
CXCL3-201ENST00000296026 USP5P45974 858 aa23.9■■□□□ 1.42
CXCL3-201ENST00000296026 IRX3P78415 501 aaPredicted RBP23.9■■□□□ 1.42
CXCL3-201ENST00000296026 MAP3K12Q12852 859 aa23.9■■□□□ 1.42
CXCL3-201ENST00000296026 IL1RAPL2Q9NP60 686 aa23.9■■□□□ 1.42
CXCL3-201ENST00000296026 MYH1P12882 1939 aa23.89■■□□□ 1.42
CXCL3-201ENST00000296026 FARP2O94887 1054 aaPredicted RBP23.89■■□□□ 1.41
CXCL3-201ENST00000296026 HOXA7P31268 230 aaPredicted RBP23.89■■□□□ 1.41
CXCL3-201ENST00000296026 HSP90AB4PQ58FF6 505 aa23.89■■□□□ 1.41
CXCL3-201ENST00000296026 DEFB118Q96PH6 123 aa23.89■■□□□ 1.41
CXCL3-201ENST00000296026 HTATIP2Q9BUP3 242 aa23.89■■□□□ 1.41
CXCL3-201ENST00000296026 MORF4L1Q9UBU8 362 aa23.89■■□□□ 1.41
CXCL3-201ENST00000296026 MS4A1P11836 297 aa23.88■■□□□ 1.41
CXCL3-201ENST00000296026 RHPN1Q8TCX5 695 aa23.88■■□□□ 1.41
CXCL3-201ENST00000296026 P2RX7Q99572 595 aaKnown RBP23.88■■□□□ 1.41
CXCL3-201ENST00000296026 TMED8Q6PL24 325 aaPredicted RBP23.87■■□□□ 1.41
CXCL3-201ENST00000296026 PAK6Q9NQU5 681 aaPredicted RBP23.87■■□□□ 1.41
CXCL3-201ENST00000296026 GJD2Q9UKL4 321 aa23.87■■□□□ 1.41
CXCL3-201ENST00000296026 GH2P01242 217 aa23.86■■□□□ 1.41
CXCL3-201ENST00000296026 TFRCP02786 760 aaKnown RBP23.86■■□□□ 1.41
CXCL3-201ENST00000296026 HERVK_113P62684 666 aa23.86■■□□□ 1.41
CXCL3-201ENST00000296026 SERPINB13Q9UIV8 391 aa23.86■■□□□ 1.41
CXCL3-201ENST00000296026 PEX10O60683 326 aa23.85■■□□□ 1.41
CXCL3-201ENST00000296026 FXR1P51114 621 aaKnown RBP eCLIP23.85■■□□□ 1.41
CXCL3-201ENST00000296026 TATDN1Q6P1N9 297 aa23.85■■□□□ 1.41
CXCL3-201ENST00000296026 EHD4Q9H223 541 aa23.85■■□□□ 1.41
CXCL3-201ENST00000296026 EMILIN3Q9NT22 766 aa23.85■■□□□ 1.41
CXCL3-201ENST00000296026 APBB1O00213 710 aa23.84■■□□□ 1.41
CXCL3-201ENST00000296026 HMGCRP04035 888 aa23.84■■□□□ 1.41
CXCL3-201ENST00000296026 CAPN2P17655 700 aa23.84■■□□□ 1.41
CXCL3-201ENST00000296026 TTF1Q15361 905 aaPredicted RBP23.84■■□□□ 1.41
CXCL3-201ENST00000296026 USP17L2Q6R6M4 530 aa23.84■■□□□ 1.41
CXCL3-201ENST00000296026 TTC6Q86TZ1 520 aa23.84■■□□□ 1.41
CXCL3-201ENST00000296026 RPAP2Q8IXW5 612 aaPredicted RBP23.84■■□□□ 1.41
CXCL3-201ENST00000296026 CLASRPQ8N2M8 674 aaKnown RBP23.84■■□□□ 1.41
CXCL3-201ENST00000296026 GPRC5AQ8NFJ5 357 aa23.84■■□□□ 1.41
CXCL3-201ENST00000296026 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.84■■□□□ 1.41
CXCL3-201ENST00000296026 TXNRD2Q9NNW7 524 aa23.84■■□□□ 1.41
CXCL3-201ENST00000296026 CHRDL2Q6WN34 429 aa23.83■■□□□ 1.41
CXCL3-201ENST00000296026 KIF1BPQ96EK5 621 aa23.83■■□□□ 1.41
CXCL3-201ENST00000296026 RIOK1Q9BRS2 568 aaKnown RBP23.83■■□□□ 1.41
CXCL3-201ENST00000296026 CRISPLD2Q9H0B8 497 aa23.83■■□□□ 1.41
CXCL3-201ENST00000296026 RBPJLQ9UBG7 517 aa23.83■■□□□ 1.41
CXCL3-201ENST00000296026 COG6Q9Y2V7 657 aa23.83■■□□□ 1.41
CXCL3-201ENST00000296026 PLXNB2O15031 1838 aa23.82■■□□□ 1.4
CXCL3-201ENST00000296026 MAGEB6P1A0A0J9YX57 407 aa23.82■■□□□ 1.4
CXCL3-201ENST00000296026 FEZ1Q99689 392 aa23.82■■□□□ 1.4
CXCL3-201ENST00000296026 DDX19BQ9UMR2 479 aa23.82■■□□□ 1.4
CXCL3-201ENST00000296026 HMMRO75330 724 aa23.81■■□□□ 1.4
CXCL3-201ENST00000296026 PLCD1P51178 756 aa23.81■■□□□ 1.4
CXCL3-201ENST00000296026 TRIM32Q13049 653 aa23.81■■□□□ 1.4
CXCL3-201ENST00000296026 RAB3GAP1Q15042 981 aa23.81■■□□□ 1.4
CXCL3-201ENST00000296026 ZYXQ15942 572 aaKnown RBP23.81■■□□□ 1.4
CXCL3-201ENST00000296026 CERKLQ49MI3 558 aaPredicted RBP23.81■■□□□ 1.4
CXCL3-201ENST00000296026 SLC9C2Q5TAH2 1124 aa23.81■■□□□ 1.4
CXCL3-201ENST00000296026 SIRT2Q8IXJ6 389 aa23.81■■□□□ 1.4
CXCL3-201ENST00000296026 BCL11AQ9H165 835 aa23.81■■□□□ 1.4
CXCL3-201ENST00000296026 ZBTB40Q9NUA8 1239 aa23.81■■□□□ 1.4
CXCL3-201ENST00000296026 NR2E3Q9Y5X4 410 aa23.81■■□□□ 1.4
CXCL3-201ENST00000296026 IFIT2P09913 472 aaKnown RBP23.8■■□□□ 1.4
CXCL3-201ENST00000296026 PDE6AP16499 860 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 CYP2B6P20813 491 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 ERVK-9P63128 1117 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 ERVK-24P63145 666 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 ABCB5Q2M3G0 1257 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 Q3C1V9 767 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.8■■□□□ 1.4
CXCL3-201ENST00000296026 GTF3C2Q8WUA4 911 aaPredicted RBP23.8■■□□□ 1.4
CXCL3-201ENST00000296026 C12orf42Q96LP6 360 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 DNAJC2Q99543 621 aaKnown RBP23.8■■□□□ 1.4
CXCL3-201ENST00000296026 NUDT12Q9BQG2 462 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 PAGR1Q9BTK6 254 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 HMX1Q9NP08 348 aaPredicted RBP23.8■■□□□ 1.4
CXCL3-201ENST00000296026 RPTORQ8N122 1335 aa23.8■■□□□ 1.4
CXCL3-201ENST00000296026 DDX60LQ5H9U9 1706 aaKnown RBP23.79■■□□□ 1.4
CXCL3-201ENST00000296026 GOLIM4O00461 696 aa23.79■■□□□ 1.4
CXCL3-201ENST00000296026 POLR3DP05423 398 aaPredicted RBP23.79■■□□□ 1.4
CXCL3-201ENST00000296026 MAPK4P31152 587 aa23.79■■□□□ 1.4
CXCL3-201ENST00000296026 SHMT1P34896 483 aa23.79■■□□□ 1.4
CXCL3-201ENST00000296026 CCAR1Q8IX12 1150 aaKnown RBP23.79■■□□□ 1.4
CXCL3-201ENST00000296026 TRIB2Q92519 343 aa23.79■■□□□ 1.4
CXCL3-201ENST00000296026 PAWRQ96IZ0 340 aaKnown RBP23.79■■□□□ 1.4
CXCL3-201ENST00000296026 CRNKL1Q9BZJ0 848 aaKnown RBP23.79■■□□□ 1.4
CXCL3-201ENST00000296026 CABP5Q9NP86 173 aa23.79■■□□□ 1.4
CXCL3-201ENST00000296026 ZNF532Q9HCE3 1301 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms