RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 MAATS1Q7Z4T9 603 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 ARL8AQ96BM9 186 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 PLCD4Q9BRC7 762 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 COL15A1P39059 1388 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 FRMPD1Q5SYB0 1578 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 NEDD4P46934 1319 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 SYNRGQ9UMZ2 1314 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 PRAMEF22A3QJZ6 481 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 MEFVO15553 781 aaPredicted RBP11.47□□□□□ -0.57
CLDN1-201ENST00000295522 KRT14P02533 472 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 APBA1Q02410 837 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 ODF2Q5BJF6 829 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 PANX2Q96RD6 677 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 CHP1Q99653 195 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 PTPRMP28827 1452 aa11.47□□□□□ -0.57
CLDN1-201ENST00000295522 ZPR1O75312 459 aa11.46□□□□□ -0.57
CLDN1-201ENST00000295522 CXCR5P32302 372 aa11.46□□□□□ -0.57
CLDN1-201ENST00000295522 GRIN1Q05586 938 aa11.46□□□□□ -0.57
CLDN1-201ENST00000295522 EZH2Q15910 746 aaKnown RBP11.46□□□□□ -0.57
CLDN1-201ENST00000295522 MLKLQ8NB16 471 aa11.46□□□□□ -0.57
CLDN1-201ENST00000295522 BAIAP2L1Q9UHR4 511 aa11.46□□□□□ -0.57
CLDN1-201ENST00000295522 NEURL4Q96JN8 1562 aa11.46□□□□□ -0.58
CLDN1-201ENST00000295522 PPP1R12AO14974 1030 aaPredicted RBP11.46□□□□□ -0.58
CLDN1-201ENST00000295522 TUBB2AQ13885 445 aa11.46□□□□□ -0.58
CLDN1-201ENST00000295522 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.58
CLDN1-201ENST00000295522 SGSM3Q96HU1 749 aa11.46□□□□□ -0.58
CLDN1-201ENST00000295522 TUBB2BQ9BVA1 445 aa11.46□□□□□ -0.58
CLDN1-201ENST00000295522 DBF4Q9UBU7 674 aaPredicted RBP11.46□□□□□ -0.58
CLDN1-201ENST00000295522 CTNND2Q9UQB3 1225 aa11.46□□□□□ -0.58
CLDN1-201ENST00000295522 CDC42BPGQ6DT37 1551 aa11.46□□□□□ -0.58
CLDN1-201ENST00000295522 DIP2CQ9Y2E4 1556 aa11.46□□□□□ -0.58
CLDN1-201ENST00000295522 HSPD1P10809 573 aaKnown RBP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 METAP2P50579 478 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 GUCY2FP51841 1108 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 TIMM10P62072 90 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 SAFBQ15424 915 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 SNCBQ16143 134 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 CYP26C1Q6V0L0 522 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 TMTC1Q8IUR5 882 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 EGFL6Q8IUX8 553 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 FMNL3Q8IVF7 1028 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 ZNF274Q96GC6 653 aaPredicted RBP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 CALR3Q96L12 384 aaKnown RBP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 SLC26A6Q9BXS9 759 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 SMARCAL1Q9NZC9 954 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 UBXN1Q04323 297 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 CKAP4Q07065 602 aaKnown RBP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 IMMTQ16891 758 aaKnown RBP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 FAM43BQ6ZT52 329 aaPredicted RBP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 MYD88Q99836 296 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 NAA15Q9BXJ9 866 aaKnown RBP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 NBPF3Q9H094 633 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 VIPAS39Q9H9C1 493 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 ZNF609O15014 1411 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 SBNO1A3KN83 1393 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 NEXMIFQ5QGS0 1516 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 UBE2Q2LH0YL09 131 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 CDC25CP30307 473 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 RNASE9P60153 205 aaKnown RBP11.45□□□□□ -0.58
CLDN1-201ENST00000295522 NNTQ13423 1086 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 NR1I3Q14994 352 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 USPL1Q5W0Q7 1092 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 WDR93Q6P2C0 686 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 RASGRP2Q7LDG7 609 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 TEX11Q8IYF3 940 aa11.45□□□□□ -0.58
CLDN1-201ENST00000295522 DDX58O95786 925 aaKnown RBP11.44□□□□□ -0.58
CLDN1-201ENST00000295522 ERVK-24P63145 666 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 UBE3BQ7Z3V4 1068 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 ENOX1Q8TC92 643 aaKnown RBP11.44□□□□□ -0.58
CLDN1-201ENST00000295522 HDAC7Q8WUI4 952 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 KCNJ14Q9UNX9 436 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 RIPOR2Q9Y4F9 1068 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 EPN1Q9Y6I3 576 aaPredicted RBP11.44□□□□□ -0.58
CLDN1-201ENST00000295522 ENO4A6NNW6 628 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 ATP5J2-PTCD1G3V325 749 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 PTCD1O75127 700 aaKnown RBP11.44□□□□□ -0.58
CLDN1-201ENST00000295522 GYPCP04921 128 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 GCFC2P16383 781 aaKnown RBP11.44□□□□□ -0.58
CLDN1-201ENST00000295522 AARSP49588 968 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLDN1-201ENST00000295522 KSR2Q6VAB6 950 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 RASSF8Q8NHQ8 419 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 PAG1Q9NWQ8 432 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 CCDC189A1A4V9 331 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 AGPSO00116 658 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 CFAP58Q5T655 872 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 USP49Q70CQ1 688 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 CCDC13Q8IYE1 715 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 MICAL1Q8TDZ2 1067 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 SLC40A1Q9NP59 571 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 HAUS2Q9NVX0 235 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 CPS1P31327 1500 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 PPLO60437 1756 aa11.44□□□□□ -0.58
CLDN1-201ENST00000295522 ESYT3A0FGR9 886 aa11.43□□□□□ -0.58
CLDN1-201ENST00000295522 GOLGA8KD6RF30 607 aa11.43□□□□□ -0.58
CLDN1-201ENST00000295522 MYO1BO43795 1136 aa11.43□□□□□ -0.58
CLDN1-201ENST00000295522 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
CLDN1-201ENST00000295522 EIF4A1P60842 406 aaKnown RBP11.43□□□□□ -0.58
CLDN1-201ENST00000295522 HDLBPQ00341 1268 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms