RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 TBC1D7Q9P0N9 293 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 CALM1P0DP23 149 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 CALM2P0DP24 149 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 CALM3P0DP25 149 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 CNGA4Q8IV77 575 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 SPAG5Q96R06 1193 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 PPP2R2CQ9Y2T4 447 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 ADD2P35612 726 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 CSGALNACT2Q8N6G5 542 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 PIGBQ92521 554 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 PCDHB6Q9Y5E3 794 aa13.09□□□□□ -0.31
TGFA-201ENST00000295400 CCNT1O60563 726 aaKnown RBP13.08□□□□□ -0.32
TGFA-201ENST00000295400 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 CHRNDQ07001 517 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 PTGDRQ13258 359 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 MAATS1Q7Z4T9 603 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 TBC1D10CQ8IV04 446 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 CEP112Q8N8E3 955 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 A0A1W2PQ27 194 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 A0A1W2PQ64 194 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 A0A1W2PQD8 194 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 NLRP10Q86W26 655 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 TGFBRAP1Q8WUH2 860 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 NELFBQ8WX92 580 aa13.08□□□□□ -0.32
TGFA-201ENST00000295400 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.08□□□□□ -0.32
TGFA-201ENST00000295400 KRT86O43790 486 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
TGFA-201ENST00000295400 PAK1Q13153 545 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 EPSTI1Q96J88 318 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 NOC4LQ9BVI4 516 aaKnown RBP13.07□□□□□ -0.32
TGFA-201ENST00000295400 EPC1Q9H2F5 836 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 DENND2AQ9ULE3 1009 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 ATP2C2O75185 946 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 PTPROQ16827 1216 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 CYB5R4Q7L1T6 521 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 TTLL11Q8NHH1 800 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 IFT81Q8WYA0 676 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 SYMPKQ92797 1274 aaKnown RBP13.07□□□□□ -0.32
TGFA-201ENST00000295400 C6orf50Q9HD87 102 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 TMEM232C9JQI7 657 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 FOXN1O15353 648 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 GNAQP50148 359 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 RASGRF1Q13972 1273 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 COL9A3Q14050 684 aaPredicted RBP13.07□□□□□ -0.32
TGFA-201ENST00000295400 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
TGFA-201ENST00000295400 C10orf67Q8IYJ2 551 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 CFAP74Q9C0B2 1584 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 CD163L1Q9NR16 1453 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 MROH5Q6ZUA9 1318 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
TGFA-201ENST00000295400 INF2Q27J81 1249 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 RNF187Q5TA31 235 aaPredicted RBP13.07□□□□□ -0.32
TGFA-201ENST00000295400 FAM114A1Q8IWE2 563 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 TEX11Q8IYF3 940 aa13.07□□□□□ -0.32
TGFA-201ENST00000295400 LMTK2Q8IWU2 1503 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 NRXN1Q9ULB1 1477 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 HEG1Q9ULI3 1381 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 PLS1Q14651 629 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 UBE3CQ15386 1083 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
TGFA-201ENST00000295400 SMIM5Q71RC9 77 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 RRP36Q96EU6 259 aaKnown RBP13.06□□□□□ -0.32
TGFA-201ENST00000295400 PYM1Q9BRP8 204 aaKnown RBP13.06□□□□□ -0.32
TGFA-201ENST00000295400 FAM207AQ9NSI2 230 aaPredicted RBP13.06□□□□□ -0.32
TGFA-201ENST00000295400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.06□□□□□ -0.32
TGFA-201ENST00000295400 INO80Q9ULG1 1556 aaPredicted RBP13.06□□□□□ -0.32
TGFA-201ENST00000295400 ABCA9Q8IUA7 1624 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 KIDINS220Q9ULH0 1771 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 KIF28PB7ZC32 967 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 POTEB2H3BUK9 544 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 CDC27P30260 824 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 NCBP1Q09161 790 aaKnown RBP13.06□□□□□ -0.32
TGFA-201ENST00000295400 KRT79Q5XKE5 535 aa13.06□□□□□ -0.32
TGFA-201ENST00000295400 ZSCAN10Q96SZ4 725 aaPredicted RBP13.06□□□□□ -0.32
TGFA-201ENST00000295400 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
TGFA-201ENST00000295400 TRAF5O00463 557 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 AP5Z1O43299 807 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 ARID4AP29374 1257 aaPredicted RBP13.05□□□□□ -0.32
TGFA-201ENST00000295400 OAS2P29728 719 aaKnown RBP13.05□□□□□ -0.32
TGFA-201ENST00000295400 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 RBM28Q9NW13 759 aaKnown RBP13.05□□□□□ -0.32
TGFA-201ENST00000295400 SH2B2O14492 632 aaPredicted RBP13.05□□□□□ -0.32
TGFA-201ENST00000295400 ERLIN2O94905 339 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 CASP14P31944 242 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 ATG9AQ7Z3C6 839 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 NAPGQ99747 312 aaPredicted RBP13.05□□□□□ -0.32
TGFA-201ENST00000295400 GPR108Q9NPR9 543 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
TGFA-201ENST00000295400 TACC1O75410 805 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 CIAO1O76071 339 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 TXLNBQ8N3L3 684 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 ANKRD13CQ8N6S4 541 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 OVOS2A0A0J9YW53 1432 aa13.05□□□□□ -0.32
TGFA-201ENST00000295400 OVOS2Q6IE36 1432 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms