RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 BRAPQ7Z569 592 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 ZDHHC15Q96MV8 337 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 SGIP1Q9BQI5 828 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 MTFR1LQ9H019 292 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 NUP62CLQ9H1M0 184 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 DDX19AQ9NUU7 478 aaKnown RBP10.63□□□□□ -0.71
PDPN-201ENST00000294489 RCOR1Q9UKL0 485 aa10.63□□□□□ -0.71
PDPN-201ENST00000294489 CCDC196A0A1B0GTZ2 297 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 RANBP6O60518 1105 aaKnown RBP10.62□□□□□ -0.71
PDPN-201ENST00000294489 FMNL1O95466 1100 aaPredicted RBP10.62□□□□□ -0.71
PDPN-201ENST00000294489 DPEP1P16444 411 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 CEBPZQ03701 1054 aaKnown RBP10.62□□□□□ -0.71
PDPN-201ENST00000294489 CCDC144CPQ8IYA2 1237 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 TEX11Q8IYF3 940 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 ZNF654Q8IZM8 581 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 RNF214Q8ND24 703 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 PPP1R9BQ96SB3 815 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 ALG1Q9BT22 464 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 PLIN4Q96Q06 1357 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 COL2A1P02458 1487 aaPredicted RBP10.62□□□□□ -0.71
PDPN-201ENST00000294489 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
PDPN-201ENST00000294489 DDAH1O94760 285 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 CCDC93Q567U6 631 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 APOBEC3HQ6NTF7 200 aaKnown RBP10.62□□□□□ -0.71
PDPN-201ENST00000294489 PKNOX2Q96KN3 472 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 MAP3K14Q99558 947 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 ZKSCAN3Q9BRR0 538 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 KCNQ5Q9NR82 932 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 USP17L3A6NCW0 530 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 USP17L4A6NCW7 530 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 LIG1P18858 919 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 FUT2Q10981 343 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 TRIM29Q14134 588 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 CCDC178Q5BJE1 867 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 OTUD7BQ6GQQ9 843 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 RCSD1Q6JBY9 416 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 USP17L1Q7RTZ2 530 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 ILDR1Q86SU0 546 aaPredicted RBP10.62□□□□□ -0.71
PDPN-201ENST00000294489 IQCA1Q86XH1 822 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 WASF1Q92558 559 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 USP28Q96RU2 1077 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 MYL10Q9BUA6 226 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 DBNDD1Q9H9R9 158 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 DACT1Q9NYF0 836 aa10.62□□□□□ -0.71
PDPN-201ENST00000294489 TTF2Q9UNY4 1162 aaKnown RBP10.62□□□□□ -0.71
PDPN-201ENST00000294489 WDHD1O75717 1129 aaPredicted RBP10.61□□□□□ -0.71
PDPN-201ENST00000294489 CALM1P0DP23 149 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 CALM2P0DP24 149 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 CALM3P0DP25 149 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 PLCD1P51178 756 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 GABPAQ06546 454 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 SSRP1Q08945 709 aaKnown RBP10.61□□□□□ -0.71
PDPN-201ENST00000294489 TROAPQ12815 778 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 FAM43AQ8N2R8 423 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 FANCBQ8NB91 859 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 PGBD1Q96JS3 809 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 MXD3Q9BW11 206 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 MYO3BQ8WXR4 1341 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 YDJCA8MPS7 323 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 C21orf2O43822 256 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 MAP3K11Q16584 847 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 RTN1Q16799 776 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 AOC3Q16853 763 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 SOGA3Q5TF21 947 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 DGKHQ86XP1 1220 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 MAPKAPK5Q8IW41 473 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 TRIM22Q8IYM9 498 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 PHKBQ93100 1093 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 TEKT1Q969V4 418 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 TNMDQ9H2S6 317 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 IL17RBQ9NRM6 502 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 SERPINA10Q9UK55 444 aa10.61□□□□□ -0.71
PDPN-201ENST00000294489 CCDC192P0DO97 292 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 RASA1P20936 1047 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 GNL2Q13823 731 aaKnown RBP10.6□□□□□ -0.71
PDPN-201ENST00000294489 UVSSAQ2YD98 709 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 AMOTL1Q8IY63 956 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 RTEL1Q9NZ71 1219 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 PRDM1O75626 825 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 POLR3DP05423 398 aaPredicted RBP10.6□□□□□ -0.71
PDPN-201ENST00000294489 CRKP46108 304 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 ME1P48163 572 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 IFIT1BQ5T764 474 aaKnown RBP10.6□□□□□ -0.71
PDPN-201ENST00000294489 CDC42EP5Q6NZY7 148 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 CRACR2BQ8N4Y2 399 aaPredicted RBP10.6□□□□□ -0.71
PDPN-201ENST00000294489 DYNLL2Q96FJ2 89 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 SLC26A6Q9BXS9 759 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 RBM28Q9NW13 759 aaKnown RBP10.6□□□□□ -0.71
PDPN-201ENST00000294489 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
PDPN-201ENST00000294489 KIF23Q02241 960 aaPredicted RBP10.6□□□□□ -0.71
PDPN-201ENST00000294489 SF3A1Q15459 793 aaKnown RBP10.6□□□□□ -0.71
PDPN-201ENST00000294489 NUP133Q8WUM0 1156 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 IDI2Q9BXS1 227 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 FTOQ9C0B1 505 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDPN-201ENST00000294489 ZNF287Q9HBT7 754 aa10.6□□□□□ -0.71
PDPN-201ENST00000294489 DDX4Q9NQI0 724 aaKnown RBP10.6□□□□□ -0.71
PDPN-201ENST00000294489 CDK8P49336 464 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 CAMK4Q16566 473 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 MYSM1Q5VVJ2 828 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms