RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
ABCF3-201ENST00000292808 CMTR1Q8N1G2 835 aaKnown RBP16.3■□□□□ 0.2
ABCF3-201ENST00000292808 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
ABCF3-201ENST00000292808 ZC3H12CQ9C0D7 883 aaKnown RBP16.3■□□□□ 0.2
ABCF3-201ENST00000292808 USP25Q9UHP3 1055 aa16.3■□□□□ 0.2
ABCF3-201ENST00000292808 MYH1P12882 1939 aa16.3■□□□□ 0.2
ABCF3-201ENST00000292808 CCDC192P0DO97 292 aa16.3■□□□□ 0.2
ABCF3-201ENST00000292808 KRT40Q6A162 431 aa16.3■□□□□ 0.2
ABCF3-201ENST00000292808 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
ABCF3-201ENST00000292808 DDX19AQ9NUU7 478 aaKnown RBP16.3■□□□□ 0.2
ABCF3-201ENST00000292808 DAGLAQ9Y4D2 1042 aa16.3■□□□□ 0.2
ABCF3-201ENST00000292808 MYH6P13533 1939 aa16.3■□□□□ 0.2
ABCF3-201ENST00000292808 H0YIN7 160 aa16.29■□□□□ 0.2
ABCF3-201ENST00000292808 POLR3DP05423 398 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-201ENST00000292808 PLCD1P51178 756 aa16.29■□□□□ 0.2
ABCF3-201ENST00000292808 RCSD1Q6JBY9 416 aa16.29■□□□□ 0.2
ABCF3-201ENST00000292808 FUT2Q10981 343 aa16.29■□□□□ 0.2
ABCF3-201ENST00000292808 TROAPQ12815 778 aa16.29■□□□□ 0.2
ABCF3-201ENST00000292808 IFIT1BQ5T764 474 aaKnown RBP16.29■□□□□ 0.2
ABCF3-201ENST00000292808 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
ABCF3-201ENST00000292808 CRACR2BQ8N4Y2 399 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-201ENST00000292808 FBXO41Q8TF61 875 aa16.29■□□□□ 0.2
ABCF3-201ENST00000292808 NOL10Q9BSC4 688 aaKnown RBP16.29■□□□□ 0.2
ABCF3-201ENST00000292808 CLSTN2Q9H4D0 955 aa16.29■□□□□ 0.2
ABCF3-201ENST00000292808 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
ABCF3-201ENST00000292808 FLT1P17948 1338 aa16.28■□□□□ 0.2
ABCF3-201ENST00000292808 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
ABCF3-201ENST00000292808 PDE4BQ07343 736 aa16.28■□□□□ 0.2
ABCF3-201ENST00000292808 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
ABCF3-201ENST00000292808 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-201ENST00000292808 RBM43Q6ZSC3 357 aaKnown RBP16.28■□□□□ 0.2
ABCF3-201ENST00000292808 SLC44A5Q8NCS7 719 aa16.28■□□□□ 0.2
ABCF3-201ENST00000292808 C7orf43Q8WVR3 580 aa16.28■□□□□ 0.2
ABCF3-201ENST00000292808 PLCB2Q00722 1185 aa16.28■□□□□ 0.2
ABCF3-201ENST00000292808 MYSM1Q5VVJ2 828 aa16.28■□□□□ 0.2
ABCF3-201ENST00000292808 ATL3Q6DD88 541 aa16.28■□□□□ 0.2
ABCF3-201ENST00000292808 CCAR1Q8IX12 1150 aaKnown RBP16.28■□□□□ 0.2
ABCF3-201ENST00000292808 TEX11Q8IYF3 940 aa16.28■□□□□ 0.2
ABCF3-201ENST00000292808 ADCY5O95622 1261 aa16.27■□□□□ 0.2
ABCF3-201ENST00000292808 ME1P48163 572 aa16.27■□□□□ 0.2
ABCF3-201ENST00000292808 TYRO3Q06418 890 aa16.27■□□□□ 0.2
ABCF3-201ENST00000292808 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
ABCF3-201ENST00000292808 KCNQ5Q9NR82 932 aa16.27■□□□□ 0.2
ABCF3-201ENST00000292808 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
ABCF3-201ENST00000292808 RTEL1Q9NZ71 1219 aa16.27■□□□□ 0.2
ABCF3-201ENST00000292808 C10orf71Q711Q0 1435 aa16.27■□□□□ 0.2
ABCF3-201ENST00000292808 PTMAP06454 111 aaKnown RBP16.27■□□□□ 0.19
ABCF3-201ENST00000292808 BRAPQ7Z569 592 aa16.27■□□□□ 0.19
ABCF3-201ENST00000292808 CERS3Q8IU89 383 aa16.27■□□□□ 0.19
ABCF3-201ENST00000292808 CCDC82Q8N4S0 544 aa16.27■□□□□ 0.19
ABCF3-201ENST00000292808 FBXW7Q969H0 707 aa16.27■□□□□ 0.19
ABCF3-201ENST00000292808 CLIC4Q9Y696 253 aa16.27■□□□□ 0.19
ABCF3-201ENST00000292808 F8W031 263 aaPredicted RBP16.26■□□□□ 0.19
ABCF3-201ENST00000292808 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 TERF1P54274 439 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 GOLPH3LQ9H4A5 285 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 DBNDD1Q9H9R9 158 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
ABCF3-201ENST00000292808 SUGT1Q9Y2Z0 365 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 MRVI1Q9Y6F6 885 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 CCDC196A0A1B0GTZ2 297 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 TSPY2A6NKD2 308 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 DDAH1O94760 285 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 CATIPQ7Z7H3 387 aa16.26■□□□□ 0.19
ABCF3-201ENST00000292808 PLCG2P16885 1265 aa16.25■□□□□ 0.19
ABCF3-201ENST00000292808 TFAP4Q01664 338 aa16.25■□□□□ 0.19
ABCF3-201ENST00000292808 SLF2Q8IX21 1173 aa16.25■□□□□ 0.19
ABCF3-201ENST00000292808 EYA3Q99504 573 aa16.25■□□□□ 0.19
ABCF3-201ENST00000292808 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
ABCF3-201ENST00000292808 RASA1P20936 1047 aa16.25■□□□□ 0.19
ABCF3-201ENST00000292808 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.193e-6■■■□□ 15.1
ABCF3-201ENST00000292808 PKN1Q16512 942 aa16.25■□□□□ 0.19
ABCF3-201ENST00000292808 LINC00301Q8NCQ3 95 aa16.25■□□□□ 0.19
ABCF3-201ENST00000292808 FAM200AQ8TCP9 573 aa16.25■□□□□ 0.19
ABCF3-201ENST00000292808 POLR3EQ9NVU0 708 aa16.25■□□□□ 0.19
ABCF3-201ENST00000292808 TTF2Q9UNY4 1162 aaKnown RBP16.25■□□□□ 0.19
ABCF3-201ENST00000292808 DEXIO95424 95 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 STK38Q15208 465 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 CCDC73Q6ZRK6 1079 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 CNKSR1Q969H4 720 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 BAG6P46379 1132 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 SF3A1Q15459 793 aaKnown RBP16.24■□□□□ 0.19
ABCF3-201ENST00000292808 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 C16orf86Q6ZW13 317 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 TRIM22Q8IYM9 498 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 FSIP1Q8NA03 581 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 ANKS1AQ92625 1134 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.24■□□□□ 0.19
ABCF3-201ENST00000292808 RNF26Q9BY78 433 aaPredicted RBP16.24■□□□□ 0.19
ABCF3-201ENST00000292808 TMX4Q9H1E5 349 aaPredicted RBP16.24■□□□□ 0.19
ABCF3-201ENST00000292808 PCDHA7Q9UN72 937 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 KCNJ14Q9UNX9 436 aa16.24■□□□□ 0.19
ABCF3-201ENST00000292808 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
ABCF3-201ENST00000292808 USP17L3A6NCW0 530 aa16.23■□□□□ 0.19
ABCF3-201ENST00000292808 USP17L4A6NCW7 530 aa16.23■□□□□ 0.19
ABCF3-201ENST00000292808 WDHD1O75717 1129 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-201ENST00000292808 MMP1P03956 469 aa16.23■□□□□ 0.19
ABCF3-201ENST00000292808 TPM2P07951 284 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms