RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DCAF5Q96JK2 942 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 PDE11AQ9HCR9 933 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 SPATA31E1Q6ZUB1 1445 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 ARL1P40616 181 aaPredicted RBP17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 FAM47AQ5JRC9 791 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 ZNF354CQ86Y25 554 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 NGLY1Q96IV0 654 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 PPP1R12CQ9BZL4 782 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 NLRC4Q9NPP4 1024 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 MAP2K2P36507 400 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 GCKRQ14397 625 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 TCHPQ9BT92 498 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 ZNF518AQ6AHZ1 1483 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 LSG1Q9H089 658 aaKnown RBP17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 ADGBQ8N7X0 1667 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 CAPN7Q9Y6W3 813 aa17.09■□□□□ 0.33
SHROOM4-201ENST00000289292 IL2RBP14784 551 aa17.08■□□□□ 0.33
SHROOM4-201ENST00000289292 PUM3Q15397 648 aaKnown RBP17.08■□□□□ 0.33
SHROOM4-201ENST00000289292 USP37Q86T82 979 aa17.08■□□□□ 0.33
SHROOM4-201ENST00000289292 C2CD5Q86YS7 1000 aa17.08■□□□□ 0.33
SHROOM4-201ENST00000289292 CLGNO14967 610 aa17.08■□□□□ 0.33
SHROOM4-201ENST00000289292 SWAP70Q9UH65 585 aa17.08■□□□□ 0.33
SHROOM4-201ENST00000289292 KCNJ18B7U540 433 aa17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 PSMC4P43686 418 aa17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 KCNJ12Q14500 433 aa17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 SAR1BQ9Y6B6 198 aa17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 IFIH1Q9BYX4 1025 aaKnown RBP17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 FERMT1Q9BQL6 677 aa17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 NUP58Q9BVL2 599 aa17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 TRIM7Q9C029 511 aa17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 SBNO1A3KN83 1393 aa17.08■□□□□ 0.32
SHROOM4-201ENST00000289292 HARSP12081 509 aaKnown RBP17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 MORC3Q14149 939 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 CABP7Q86V35 215 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 STK38LQ9Y2H1 464 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 IBTKQ9P2D0 1353 aaPredicted RBP17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 ZNF131P52739 623 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 CABS1Q96KC9 395 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 TM6SF1Q9BZW5 370 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 SREK1Q8WXA9 508 aaKnown RBP17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 LIG3P49916 1009 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 KIAA1524Q8TCG1 905 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 STMN2Q93045 179 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 EAF2Q96CJ1 260 aaPredicted RBP17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 NAP1L3Q99457 506 aaPredicted RBP17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 TLR7Q9NYK1 1049 aaKnown RBP17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 TFCP2L1Q9NZI6 479 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
SHROOM4-201ENST00000289292 PAK2Q13177 524 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 PLEKHF1Q96S99 279 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 IMPG2Q9BZV3 1241 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 ERBB4Q15303 1308 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 ADCY9O60503 1353 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 EFCAB8A8MWE9 144 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 FCHSD1Q86WN1 690 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 RPL13P26373 211 aaKnown RBP17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 TACO1Q9BSH4 297 aaKnown RBP17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 DSCC1Q9BVC3 393 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 KIF24Q5T7B8 1368 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 DDX39AO00148 427 aaKnown RBP17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 ARID4AP29374 1257 aaPredicted RBP17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 BRD3Q15059 726 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 CFAP221Q4G0U5 840 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 DDX41Q9UJV9 622 aaKnown RBP17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 INSRP06213 1382 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 MYO1AQ9UBC5 1043 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 MKRN1Q9UHC7 482 aaKnown RBP17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
SHROOM4-201ENST00000289292 KLHL30Q0D2K2 578 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 CCDC24Q8N4L8 307 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 LSM14BQ9BX40 385 aaKnown RBP17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 STIM2Q9P246 746 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 SFMBT2Q5VUG0 894 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 SPATA5Q8NB90 893 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 BAIAP2L1Q9UHR4 511 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 PFKFB2O60825 505 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 ZMYND10O75800 440 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 NBPF14Q5TI25 921 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 PPP1R21Q6ZMI0 780 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 EEF2KMTQ96G04 330 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 NEURL1BA8MQ27 555 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 CALUO43852 315 aaPredicted RBP17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 ANKRD42Q8N9B4 389 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 CACTINQ8WUQ7 758 aaKnown RBP17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 ARHGEF2Q92974 986 aaKnown RBP17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 ENC1O14682 589 aa17.05■□□□□ 0.32
SHROOM4-201ENST00000289292 ECM2O94769 699 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms