RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CCZ1P86791 482 aaPredicted RBP18.07■□□□□ 0.48
SMAD6-201ENST00000288840 FAM98CQ17RN3 349 aaKnown RBP18.07■□□□□ 0.48
SMAD6-201ENST00000288840 KANK3Q6NY19 840 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 FBXO38Q6PIJ6 1188 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 GOLGA6L1Q8N7Z2 621 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 TRIM47Q96LD4 638 aa18.07■□□□□ 0.48
SMAD6-201ENST00000288840 SLIT1O75093 1534 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 GOLGA8HP0CJ92 632 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 TTC38Q5R3I4 469 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 SARM1Q6SZW1 724 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 EPB41L4AQ9HCS5 686 aaPredicted RBP18.06■□□□□ 0.48
SMAD6-201ENST00000288840 GUCA1BQ9UMX6 200 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 SOS2Q07890 1332 aaPredicted RBP18.06■□□□□ 0.48
SMAD6-201ENST00000288840 TSPY3P0CV98 308 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 TSPY8P0CW00 308 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 BMS1Q14692 1282 aaKnown RBP18.06■□□□□ 0.48
SMAD6-201ENST00000288840 MAN1B1Q9UKM7 699 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMAD6-201ENST00000288840 SEC31AO94979 1220 aaKnown RBP18.06■□□□□ 0.48
SMAD6-201ENST00000288840 MMP1P03956 469 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 PTGDRQ13258 359 aa18.06■□□□□ 0.48
SMAD6-201ENST00000288840 SYMPKQ92797 1274 aaKnown RBP18.06■□□□□ 0.48
SMAD6-201ENST00000288840 CDC25BP30305 580 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 STIM1Q13586 685 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 C8orf37Q96NL8 207 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 TNS3Q68CZ2 1445 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 HSP90B2PQ58FF3 399 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 AXDND1Q5T1B0 1012 aaPredicted RBP18.05■□□□□ 0.48
SMAD6-201ENST00000288840 E4F1Q66K89 784 aaPredicted RBP18.05■□□□□ 0.48
SMAD6-201ENST00000288840 SPECC1LQ69YQ0 1117 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 AKR1B15C9JRZ8 316 aaPredicted RBP18.05■□□□□ 0.48
SMAD6-201ENST00000288840 C6orf229H3BNL8 230 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 CCDC175P0C221 793 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 GPS2Q13227 327 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 ERFEQ4G0M1 354 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 METTL16Q86W50 562 aaKnown RBP18.05■□□□□ 0.48
SMAD6-201ENST00000288840 NKX2-3Q8TAU0 364 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 DEF6Q9H4E7 631 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 ZNF219Q9P2Y4 722 aaPredicted RBP18.05■□□□□ 0.48
SMAD6-201ENST00000288840 FBXO3Q9UK99 471 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 PPP2R2CQ9Y2T4 447 aa18.05■□□□□ 0.48
SMAD6-201ENST00000288840 GNPATO15228 680 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 UBXN1Q04323 297 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 PICALMQ13492 652 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
SMAD6-201ENST00000288840 IGDCC4Q8TDY8 1250 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 GPR101Q96P66 508 aaPredicted RBP18.04■□□□□ 0.48
SMAD6-201ENST00000288840 ZSCAN10Q96SZ4 725 aaPredicted RBP18.04■□□□□ 0.48
SMAD6-201ENST00000288840 MPHOSPH10O00566 681 aaKnown RBP18.04■□□□□ 0.48
SMAD6-201ENST00000288840 KCNQ2O43526 872 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 CLSTN1O94985 981 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 FMNL1O95466 1100 aaPredicted RBP18.04■□□□□ 0.48
SMAD6-201ENST00000288840 CYP2D6P10635 497 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 IFNAR1P17181 557 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 CPVLQ9H3G5 476 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 ST7Q9NRC1 585 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 ZNHIT6Q9NWK9 470 aaKnown RBP18.04■□□□□ 0.48
SMAD6-201ENST00000288840 MATR3P43243 847 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMAD6-201ENST00000288840 TFAP4Q01664 338 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 MLKLQ8NB16 471 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 CAPZA3Q96KX2 299 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 FEZ1Q99689 392 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 IRX2Q9BZI1 471 aaPredicted RBP18.04■□□□□ 0.48
SMAD6-201ENST00000288840 SYNRGQ9UMZ2 1314 aa18.04■□□□□ 0.48
SMAD6-201ENST00000288840 FAM170AA1A519 330 aa18.03■□□□□ 0.48
SMAD6-201ENST00000288840 MTIF2P46199 727 aaKnown RBP18.03■□□□□ 0.48
SMAD6-201ENST00000288840 CSF1RP07333 972 aa18.03■□□□□ 0.48
SMAD6-201ENST00000288840 HIBADHP31937 336 aaKnown RBP18.03■□□□□ 0.48
SMAD6-201ENST00000288840 IL6STP40189 918 aaPredicted RBP18.03■□□□□ 0.48
SMAD6-201ENST00000288840 LETM2Q2VYF4 491 aa18.03■□□□□ 0.48
SMAD6-201ENST00000288840 IQUBQ8NA54 791 aa18.03■□□□□ 0.48
SMAD6-201ENST00000288840 PPP6R2O75170 966 aa18.03■□□□□ 0.48
SMAD6-201ENST00000288840 FKBP15Q5T1M5 1219 aa18.03■□□□□ 0.48
SMAD6-201ENST00000288840 JAKMIP3Q5VZ66 844 aa18.03■□□□□ 0.48
SMAD6-201ENST00000288840 ARHGAP6O43182 974 aa18.02■□□□□ 0.48
SMAD6-201ENST00000288840 KIF5BP33176 963 aa18.02■□□□□ 0.48
SMAD6-201ENST00000288840 PPP2R3AQ06190 1150 aa18.02■□□□□ 0.48
SMAD6-201ENST00000288840 KMT5BQ4FZB7 885 aa18.02■□□□□ 0.48
SMAD6-201ENST00000288840 RBM43Q6ZSC3 357 aaKnown RBP18.02■□□□□ 0.48
SMAD6-201ENST00000288840 MAPKAPK5Q8IW41 473 aa18.02■□□□□ 0.48
SMAD6-201ENST00000288840 NOC3LQ8WTT2 800 aaKnown RBP18.02■□□□□ 0.48
SMAD6-201ENST00000288840 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.02■□□□□ 0.48
SMAD6-201ENST00000288840 SETD1AO15047 1707 aaKnown RBP18.02■□□□□ 0.48
SMAD6-201ENST00000288840 TRIM21P19474 475 aaKnown RBP18.02■□□□□ 0.48
SMAD6-201ENST00000288840 SLF1Q9BQI6 1058 aa18.02■□□□□ 0.48
SMAD6-201ENST00000288840 SOWAHDA6NJG2 315 aa18.02■□□□□ 0.47
SMAD6-201ENST00000288840 MTF1Q14872 753 aa18.02■□□□□ 0.47
SMAD6-201ENST00000288840 NOM1Q5C9Z4 860 aaKnown RBP18.01■□□□□ 0.47
SMAD6-201ENST00000288840 GDAP1L1Q96MZ0 367 aa18.01■□□□□ 0.47
SMAD6-201ENST00000288840 RTL9Q8NET4 1388 aa18.01■□□□□ 0.47
SMAD6-201ENST00000288840 FMR1Q06787 632 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMAD6-201ENST00000288840 TEX33O43247 280 aa18.01■□□□□ 0.47
SMAD6-201ENST00000288840 NAPAP54920 295 aa18.01■□□□□ 0.47
SMAD6-201ENST00000288840 PARP10Q53GL7 1025 aa18.01■□□□□ 0.47
SMAD6-201ENST00000288840 RESP18Q5W5W9 173 aa18.01■□□□□ 0.47
SMAD6-201ENST00000288840 DYNLL2Q96FJ2 89 aa18.01■□□□□ 0.47
SMAD6-201ENST00000288840 ARFGAP3Q9NP61 516 aa18.01■□□□□ 0.47
SMAD6-201ENST00000288840 SRP68Q9UHB9 627 aaKnown RBP18.01■□□□□ 0.47
SMAD6-201ENST00000288840 PRDX5P30044 214 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms