RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 AFAP1Q8N556 730 aa9.3□□□□□ -0.92
CACNA1D-201ENST00000288139 RBM8AQ9Y5S9 174 aaKnown RBP9.3□□□□□ -0.92
CACNA1D-201ENST00000288139 URB1O60287 2271 aaKnown RBP9.3□□□□□ -0.92
CACNA1D-201ENST00000288139 KSR2Q6VAB6 950 aa9.3□□□□□ -0.92
CACNA1D-201ENST00000288139 SAR1BQ9Y6B6 198 aa9.3□□□□□ -0.92
CACNA1D-201ENST00000288139 MAP3K7O43318 606 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 TRAPPC10P48553 1259 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 KIF11P52732 1056 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 STAP2Q9UGK3 403 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 LCMT1Q9UIC8 334 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 RCAN1P53805 252 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 ICE2Q659A1 982 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 PATL1Q86TB9 770 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 RBSNQ9H1K0 784 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 ANKIB1Q9P2G1 1089 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 POLR3DP05423 398 aaPredicted RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 ATP10BO94823 1461 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 GRM8O00222 908 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 ZNF449Q6P9G9 518 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 INTS8Q75QN2 995 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 PDCD7Q8N8D1 485 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 AFG3L2Q9Y4W6 797 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 ATP5HO75947 161 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 NLRP12P59046 1061 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 RTN1Q16799 776 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 YY1AP1Q9H869 796 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 POLR3EQ9NVU0 708 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 ZSCAN32Q9NX65 697 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 TBCAO75347 108 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 CLNS1AP54105 237 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 CCDC62Q6P9F0 684 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 GSTA5Q7RTV2 222 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 GPATCH11Q8N954 259 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 IGSF22Q8N9C0 903 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 BBOF1Q8ND07 529 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 VIPAS39Q9H9C1 493 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 UTP11Q9Y3A2 253 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 ASXL3Q9C0F0 2248 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 PFDN6O15212 129 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 EEF1GP26641 437 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 CCDC124Q96CT7 223 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 DDX41Q9UJV9 622 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 VAMP4O75379 141 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 ARID5AQ03989 594 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 C3orf20Q8ND61 904 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 IFNKQ9P0W0 207 aa9.29□□□□□ -0.92
CACNA1D-201ENST00000288139 A2ML1A8K2U0 1454 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 SBNO1A3KN83 1393 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 CCDC170Q8IYT3 715 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 ZNF274Q96GC6 653 aaPredicted RBP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 NAA25Q14CX7 972 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 WTAPQ15007 396 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 TMEM67Q5HYA8 995 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 GTF3C6Q969F1 213 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 MRGBPQ9NV56 204 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 IFIT3O14879 490 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 DEXIO95424 95 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 AK2P54819 239 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 NR1H3Q13133 447 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 PPME1Q9Y570 386 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 LAD1O00515 517 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 SART1O43290 800 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 FKBP4Q02790 459 aaKnown RBP eCLIP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 ITIH3Q06033 890 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 CREB3L3Q68CJ9 461 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 KIAA1468Q9P260 1216 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 HNRNPCL2B2RXH8 293 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 HNRNPCL1O60812 293 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 RNF40O75150 1001 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 IDEP14735 1019 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 TERF2Q15554 542 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 TSPYL2Q9H2G4 693 aaPredicted RBP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 ANGEL1Q9UNK9 670 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 MRVI1Q9Y6F6 885 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 MAP1BP46821 2468 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 POTEB3A0JP26 581 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 CETN3O15182 167 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 PRPF6O94906 941 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 RPS6KB1P23443 525 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 OAS2P29728 719 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 LGSNQ5TDP6 509 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 ANO1Q5XXA6 986 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 POTEBQ6S5H4 581 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 RAB11FIP4Q86YS3 637 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 ITGB1BP2Q9UKP3 347 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 WDR19Q8NEZ3 1342 aa9.28□□□□□ -0.92
CACNA1D-201ENST00000288139 ABCA8O94911 1581 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 BIRC3Q13489 604 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 ELF2Q15723 593 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 TMC2Q8TDI7 906 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 RPGRQ92834 1020 aaKnown RBP9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 FAM81BQ96LP2 452 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 BATF3Q9NR55 127 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 BAG5Q9UL15 447 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 GOLGA8CPA6NN73 597 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 ZNF189O75820 626 aaPredicted RBP9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 HLA-DOAP06340 250 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 TAF11Q15544 211 aa9.27□□□□□ -0.92
CACNA1D-201ENST00000288139 SLC9C1Q4G0N8 1177 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms