RNA–Protein interactions for RNA: ENST00000280780.6

FAM53B-201, Transcript of family with sequence similarity 53 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM53B, Length 1,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-201ENST00000280780 COL9A3Q14050 684 aaPredicted RBP26.51■■□□□ 1.83
FAM53B-201ENST00000280780 ELP3Q9H9T3 547 aa26.51■■□□□ 1.83
FAM53B-201ENST00000280780 MYH8P13535 1937 aa26.51■■□□□ 1.83
FAM53B-201ENST00000280780 POLR3DP05423 398 aaPredicted RBP26.5■■□□□ 1.83
FAM53B-201ENST00000280780 MCCP23508 829 aa26.5■■□□□ 1.83
FAM53B-201ENST00000280780 ZNF341Q9BYN7 854 aa26.5■■□□□ 1.83
FAM53B-201ENST00000280780 INCENPQ9NQS7 918 aa26.5■■□□□ 1.83
FAM53B-201ENST00000280780 NOGQ13253 232 aa26.5■■□□□ 1.83
FAM53B-201ENST00000280780 RNF20Q5VTR2 975 aa26.5■■□□□ 1.83
FAM53B-201ENST00000280780 DCAF15Q66K64 600 aa26.5■■□□□ 1.83
FAM53B-201ENST00000280780 NKX2-3Q8TAU0 364 aa26.5■■□□□ 1.83
FAM53B-201ENST00000280780 IL17RAQ96F46 866 aa26.5■■□□□ 1.83
FAM53B-201ENST00000280780 RRP1BQ14684 758 aaKnown RBP26.49■■□□□ 1.83
FAM53B-201ENST00000280780 ADCK5Q3MIX3 580 aa26.49■■□□□ 1.83
FAM53B-201ENST00000280780 TSGA10IPQ3SY00 556 aa26.49■■□□□ 1.83
FAM53B-201ENST00000280780 SPRYD7Q5W111 196 aa26.49■■□□□ 1.83
FAM53B-201ENST00000280780 STK11IPQ8N1F8 1099 aa26.49■■□□□ 1.83
FAM53B-201ENST00000280780 HOOK2Q96ED9 719 aa26.49■■□□□ 1.83
FAM53B-201ENST00000280780 DYNLL2Q96FJ2 89 aa26.49■■□□□ 1.83
FAM53B-201ENST00000280780 WBP1LQ9NX94 342 aa26.49■■□□□ 1.83
FAM53B-201ENST00000280780 SNCAIPQ9Y6H5 919 aa26.49■■□□□ 1.83
FAM53B-201ENST00000280780 WNK4Q96J92 1243 aa26.48■■□□□ 1.83
FAM53B-201ENST00000280780 UNCXA6NJT0 531 aa26.47■■□□□ 1.83
FAM53B-201ENST00000280780 E7EWF7 191 aa26.47■■□□□ 1.83
FAM53B-201ENST00000280780 ANAPC15P60006 121 aa26.47■■□□□ 1.83
FAM53B-201ENST00000280780 DHX36Q9H2U1 1008 aaKnown RBP26.47■■□□□ 1.83
FAM53B-201ENST00000280780 NEDD4P46934 1319 aa26.47■■□□□ 1.83
FAM53B-201ENST00000280780 HSPA1AP0DMV8 641 aaKnown RBP26.46■■□□□ 1.83
FAM53B-201ENST00000280780 HSPA1BP0DMV9 641 aaKnown RBP26.46■■□□□ 1.83
FAM53B-201ENST00000280780 ZKSCAN1P17029 563 aaPredicted RBP26.46■■□□□ 1.83
FAM53B-201ENST00000280780 SLC44A5Q8NCS7 719 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 DNAJC18Q9H819 358 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 TBC1D12O60347 775 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 GABPAQ06546 454 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 AKNAD1Q5T1N1 836 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 TTC6Q86TZ1 520 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 AMOTL1Q8IY63 956 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 STAG1Q8WVM7 1258 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 OPTNQ96CV9 577 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 IPO9Q96P70 1041 aaKnown RBP26.46■■□□□ 1.83
FAM53B-201ENST00000280780 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.46■■□□□ 1.83
FAM53B-201ENST00000280780 PI4KBQ9UBF8 816 aa26.46■■□□□ 1.83
FAM53B-201ENST00000280780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.46■■□□□ 1.83
FAM53B-201ENST00000280780 FGRP09769 529 aa26.45■■□□□ 1.82
FAM53B-201ENST00000280780 EHD4Q9H223 541 aa26.45■■□□□ 1.82
FAM53B-201ENST00000280780 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.45■■□□□ 1.82
FAM53B-201ENST00000280780 C16orf86Q6ZW13 317 aa26.44■■□□□ 1.82
FAM53B-201ENST00000280780 METTL16Q86W50 562 aaKnown RBP26.44■■□□□ 1.82
FAM53B-201ENST00000280780 CSADQ9Y600 493 aa26.44■■□□□ 1.82
FAM53B-201ENST00000280780 HLA-DOAP06340 250 aa26.43■■□□□ 1.82
FAM53B-201ENST00000280780 JAKMIP1Q96N16 626 aaKnown RBP26.43■■□□□ 1.82
FAM53B-201ENST00000280780 SERPINB13Q9UIV8 391 aa26.43■■□□□ 1.82
FAM53B-201ENST00000280780 PRDM1O75626 825 aa26.42■■□□□ 1.82
FAM53B-201ENST00000280780 JAG1P78504 1218 aa26.42■■□□□ 1.82
FAM53B-201ENST00000280780 SHROOM1Q2M3G4 852 aaPredicted RBP26.42■■□□□ 1.82
FAM53B-201ENST00000280780 FOXN1O15353 648 aa26.41■■□□□ 1.82
FAM53B-201ENST00000280780 CPA1P15085 419 aa26.41■■□□□ 1.82
FAM53B-201ENST00000280780 MAP2K1Q02750 393 aaPredicted RBP26.41■■□□□ 1.82
FAM53B-201ENST00000280780 MFSD6Q6ZSS7 791 aa26.41■■□□□ 1.82
FAM53B-201ENST00000280780 OTUD5Q96G74 571 aa26.41■■□□□ 1.82
FAM53B-201ENST00000280780 SPDYE5A6NIY4 337 aa26.41■■□□□ 1.82
FAM53B-201ENST00000280780 CDK8P49336 464 aa26.41■■□□□ 1.82
FAM53B-201ENST00000280780 KRT32Q14532 448 aa26.41■■□□□ 1.82
FAM53B-201ENST00000280780 CCDC84Q86UT8 332 aaPredicted RBP26.41■■□□□ 1.82
FAM53B-201ENST00000280780 B4E1Z4 1266 aa26.4■■□□□ 1.82
FAM53B-201ENST00000280780 ORC4O43929 436 aa26.4■■□□□ 1.82
FAM53B-201ENST00000280780 SLC3A2P08195 630 aaKnown RBP26.4■■□□□ 1.82
FAM53B-201ENST00000280780 ZBTB48P10074 688 aaPredicted RBP26.4■■□□□ 1.82
FAM53B-201ENST00000280780 SHMT1P34896 483 aa26.4■■□□□ 1.82
FAM53B-201ENST00000280780 NOL9Q5SY16 702 aaKnown RBP26.4■■□□□ 1.82
FAM53B-201ENST00000280780 FOXP4Q8IVH2 680 aaPredicted RBP26.4■■□□□ 1.82
FAM53B-201ENST00000280780 MS4A4AQ96JQ5 239 aa26.4■■□□□ 1.82
FAM53B-201ENST00000280780 RNF41Q9H4P4 317 aaPredicted RBP26.4■■□□□ 1.82
FAM53B-201ENST00000280780 TSKSQ9UJT2 592 aa26.4■■□□□ 1.82
FAM53B-201ENST00000280780 GREB1LQ9C091 1923 aaPredicted RBP26.39■■□□□ 1.82
FAM53B-201ENST00000280780 TM4SF4P48230 202 aa26.39■■□□□ 1.82
FAM53B-201ENST00000280780 ERO1BQ86YB8 467 aa26.39■■□□□ 1.82
FAM53B-201ENST00000280780 MB21D2Q8IYB1 491 aaPredicted RBP26.39■■□□□ 1.82
FAM53B-201ENST00000280780 NEK1Q96PY6 1258 aa26.39■■□□□ 1.82
FAM53B-201ENST00000280780 UPF3BQ9BZI7 483 aaKnown RBP26.39■■□□□ 1.82
FAM53B-201ENST00000280780 TM6SF1Q9BZW5 370 aa26.39■■□□□ 1.82
FAM53B-201ENST00000280780 HERC5Q9UII4 1024 aaKnown RBP26.39■■□□□ 1.82
FAM53B-201ENST00000280780 IRF6O14896 467 aa26.38■■□□□ 1.81
FAM53B-201ENST00000280780 CASTP20810 708 aaKnown RBP26.38■■□□□ 1.81
FAM53B-201ENST00000280780 RASA1P20936 1047 aa26.38■■□□□ 1.81
FAM53B-201ENST00000280780 PDE4BQ07343 736 aa26.38■■□□□ 1.81
FAM53B-201ENST00000280780 RRP12Q5JTH9 1297 aaKnown RBP26.38■■□□□ 1.81
FAM53B-201ENST00000280780 PTPN18Q99952 460 aa26.38■■□□□ 1.81
FAM53B-201ENST00000280780 ZSWIM6Q9HCJ5 1215 aa26.38■■□□□ 1.81
FAM53B-201ENST00000280780 CTNND1O60716 968 aaKnown RBP26.37■■□□□ 1.81
FAM53B-201ENST00000280780 PCP11498 1178 aaKnown RBP26.37■■□□□ 1.81
FAM53B-201ENST00000280780 SCYL3Q8IZE3 742 aa26.37■■□□□ 1.81
FAM53B-201ENST00000280780 CRACR2BQ8N4Y2 399 aaPredicted RBP26.37■■□□□ 1.81
FAM53B-201ENST00000280780 NCOA7Q8NI08 942 aa26.37■■□□□ 1.81
FAM53B-201ENST00000280780 CAP2P40123 477 aa26.37■■□□□ 1.81
FAM53B-201ENST00000280780 ANTXR2P58335 489 aa26.37■■□□□ 1.81
FAM53B-201ENST00000280780 CYB5R4Q7L1T6 521 aa26.37■■□□□ 1.81
FAM53B-201ENST00000280780 CNNM2Q9H8M5 875 aa26.37■■□□□ 1.81
FAM53B-201ENST00000280780 TOMM22Q9NS69 142 aa26.37■■□□□ 1.81
FAM53B-201ENST00000280780 RNF186Q9NXI6 227 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms