RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 NDUFAB1O14561 156 aa11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 P4HA2O15460 535 aa11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 RARSP54136 660 aaKnown RBP11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 SLC15A3Q8IY34 581 aa11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 MYO1HQ8N1T3 1032 aa11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 FNBP4Q8N3X1 1017 aaPredicted RBP11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 MSANTD4Q8NCY6 345 aa11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 SLC39A3Q9BRY0 314 aa11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 LNPKQ9C0E8 428 aa11.92□□□□□ -0.5
ERGIC3-201ENST00000279052 UGGT1Q9NYU2 1555 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 DYTNA2CJ06 578 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 PALM3A6NDB9 673 aaPredicted RBP11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 SYF2O95926 243 aaKnown RBP11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 SSBP05455 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 PSMC4P43686 418 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 RNF187Q5TA31 235 aaPredicted RBP11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 TRIM65Q6PJ69 517 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 CRELD2Q6UXH1 353 aaPredicted RBP11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 CCHCR1Q8TD31 782 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 SLC7A5P2Q9GIP4 190 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 NUP62CLQ9H1M0 184 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 IMPACTQ9P2X3 320 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 HMGB1P1B2RPK0 211 aaPredicted RBP11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 SH3BP5O60239 455 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 NPTXRO95502 500 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 GNAI3P08754 354 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 LMNB1P20700 586 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 ABCA6Q8N139 1617 aa11.91□□□□□ -0.5
ERGIC3-201ENST00000279052 VWDEQ8N2E2 1590 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 GOLGA8AA7E2F4 631 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 ATP9BO43861 1147 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 CCDC166P0CW27 439 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 BCRP11274 1271 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 ZNF165P49910 485 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 ARPC4P59998 168 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 PSME1Q06323 249 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 LARP1BQ659C4 914 aaKnown RBP11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 CCDC121Q6ZUS5 278 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 ANKRD13AQ8IZ07 590 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 CCDC155Q8N6L0 562 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 SEZ6LQ9BYH1 1024 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 LRRCC1Q9C099 1032 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 GGA2Q9UJY4 613 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 RRP7AQ9Y3A4 280 aaKnown RBP11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 C2CD2Q9Y426 696 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 GRIN2DO15399 1336 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 ADGRL1O94910 1474 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 ABLIM1O14639 778 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 MXRA7P84157 204 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 NBPF14Q5TI25 921 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 NAA16Q6N069 864 aaPredicted RBP11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 TEX9Q8N6V9 391 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 PPP1R14BQ96C90 147 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 STAMBPL1Q96FJ0 436 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 USP16Q9Y5T5 823 aa11.9□□□□□ -0.5
ERGIC3-201ENST00000279052 NSD3Q9BZ95 1437 aa11.9□□□□□ -0.51
ERGIC3-201ENST00000279052 NEURL4Q96JN8 1562 aa11.9□□□□□ -0.51
ERGIC3-201ENST00000279052 SBNO2Q9Y2G9 1366 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 GNGT1P63211 74 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 SREK1Q8WXA9 508 aaKnown RBP11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 HOXC10Q9NYD6 342 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 INO80Q9ULG1 1556 aaPredicted RBP11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 GPR75-ASB3A0A0A6YYF3 556 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 STXBP3O00186 592 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 NDUFB5O43674 189 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 HOXD12P35452 270 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 DMPKQ09013 629 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 EMC10Q5UCC4 262 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 PPP2R3CQ969Q6 453 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 GCC1Q96CN9 775 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 HVCN1Q96D96 273 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 ZNF570Q96NI8 536 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 SLC12A5Q9H2X9 1139 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 ANKZF1Q9H8Y5 726 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 TNNQ9UQP3 1299 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 ASB3Q9Y575 518 aa11.89□□□□□ -0.51
ERGIC3-201ENST00000279052 UNCXA6NJT0 531 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 TROVE2P10155 538 aaKnown RBP eCLIP11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 CREB3L3Q68CJ9 461 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 SMC1BQ8NDV3 1235 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 WDR66Q8TBY9 1149 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 OSBPL1AQ9BXW6 950 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 NRDE2Q9H7Z3 1164 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 SEL1LQ9UBV2 794 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 DDX25Q9UHL0 483 aaKnown RBP11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 RTL1A6NKG5 1358 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 PFDN1O60925 122 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 ANP32DO95626 131 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 MSL3P1P0C860 447 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
ERGIC3-201ENST00000279052 TCP11L2Q8N4U5 519 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms