RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 AGGF1Q8N302 714 aaeCLIP5.95□□□□□ -1.46
CD44-202ENST00000278385 PNISRQ8TF01 805 aaKnown RBP5.95□□□□□ -1.46
CD44-202ENST00000278385 CASKIN1Q8WXD9 1431 aa5.95□□□□□ -1.46
CD44-202ENST00000278385 UTP4Q969X6 686 aaKnown RBP5.95□□□□□ -1.46
CD44-202ENST00000278385 GEMIN8Q9NWZ8 242 aaKnown RBP5.95□□□□□ -1.46
CD44-202ENST00000278385 KCNK4Q9NYG8 393 aa5.95□□□□□ -1.46
CD44-202ENST00000278385 PARP2Q9UGN5 583 aa5.95□□□□□ -1.46
CD44-202ENST00000278385 AK5Q9Y6K8 562 aa5.95□□□□□ -1.46
CD44-202ENST00000278385 LOC100289279A0A1B0GTE1 492 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 MEGF11A6BM72 1044 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 ENPP3O14638 875 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 ADAM11O75078 769 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 USP17L7P0C7H9 530 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 RXRBP28702 533 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 NFE2L2Q16236 605 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 ADAMTSL4Q6UY14 1074 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 TPTE2Q6XPS3 522 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 KRBA2Q6ZNG9 492 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 KIAA1211Q6ZU35 1233 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 FMNL3Q8IVF7 1028 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 FAM9BQ8IZU0 186 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 GLIS3Q8NEA6 775 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 ACSBG1Q96GR2 724 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 RPS6KC1Q96S38 1066 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 SETDB2Q96T68 719 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 SPC25Q9HBM1 224 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 VTI1BQ9UEU0 232 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.94□□□□□ -1.46
CD44-202ENST00000278385 RPS6KL1Q9Y6S9 549 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 FANCAO15360 1455 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 ADGRL1O94910 1474 aa5.94□□□□□ -1.46
CD44-202ENST00000278385 CDK13Q14004 1512 aaKnown RBP5.94□□□□□ -1.46
CD44-202ENST00000278385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.94□□□□□ -1.46
CD44-202ENST00000278385 SCAPERQ9BY12 1400 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 PRC1O43663 620 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 WISP1O95388 367 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 PROCP04070 461 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 RLBP1P12271 317 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 MCCP23508 829 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 SULF2Q8IWU5 870 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 GIMAP7Q8NHV1 300 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 MTA3Q9BTC8 594 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 OSBPL7Q9BZF2 842 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 KCNF1Q9H3M0 494 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 TPSG1Q9NRR2 321 aa5.93□□□□□ -1.46
CD44-202ENST00000278385 GNL3LQ9NVN8 582 aaKnown RBP5.93□□□□□ -1.46
CD44-202ENST00000278385 BSDC1Q9NW68 430 aaPredicted RBP5.93□□□□□ -1.46
CD44-202ENST00000278385 HECW1Q76N89 1606 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 CCDC18Q5T9S5 1454 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 MAGI2Q86UL8 1455 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 K7ELQ4 463 aaPredicted RBP5.92□□□□□ -1.46
CD44-202ENST00000278385 GSC2O15499 205 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 FURINP09958 794 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 H2AFB1P0C5Y9 115 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 H2AFB2P0C5Z0 115 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 NME2P22392 152 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 ARNTP27540 789 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 ZNF76P36508 570 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 CCDC85BQ15834 202 aaPredicted RBP5.92□□□□□ -1.46
CD44-202ENST00000278385 AKAP4Q5JQC9 854 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 HGSNATQ68CP4 663 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 SV2BQ7L1I2 683 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 C11orf96Q7Z7L8 435 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 MRFAP1L1Q96HT8 127 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 SEMA6BQ9H3T3 888 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 SUGCTQ9HAC7 445 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 PICK1Q9NRD5 415 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 STOML1Q9UBI4 398 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 HIF3AQ9Y2N7 669 aa5.92□□□□□ -1.46
CD44-202ENST00000278385 WDHD1O75717 1129 aaPredicted RBP5.91□□□□□ -1.46
CD44-202ENST00000278385 STK10O94804 968 aaKnown RBP5.91□□□□□ -1.46
CD44-202ENST00000278385 GSTP1P09211 210 aaKnown RBP5.91□□□□□ -1.46
CD44-202ENST00000278385 DAB2P98082 770 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 DYMQ7RTS9 669 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 TMC4Q7Z404 712 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 DZIP1LQ8IYY4 767 aaKnown RBP5.91□□□□□ -1.46
CD44-202ENST00000278385 AFAP1Q8N556 730 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 SMG8Q8ND04 991 aaKnown RBP5.91□□□□□ -1.46
CD44-202ENST00000278385 MEGF10Q96KG7 1140 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 TMPRSS13Q9BYE2 586 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 ZC3H12CQ9C0D7 883 aaKnown RBP5.91□□□□□ -1.46
CD44-202ENST00000278385 PIDD1Q9HB75 910 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 KRT82Q9NSB4 513 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 TYW1Q9NV66 732 aaKnown RBP5.91□□□□□ -1.46
CD44-202ENST00000278385 AP4E1Q9UPM8 1137 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 RAXQ9Y2V3 346 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 PRKAB1Q9Y478 270 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 COMMD10Q9Y6G5 202 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 POGZQ7Z3K3 1410 aa5.91□□□□□ -1.46
CD44-202ENST00000278385 FBXO24O75426 580 aa5.9□□□□□ -1.46
CD44-202ENST00000278385 PDGFRBP09619 1106 aa5.9□□□□□ -1.46
CD44-202ENST00000278385 BMP3P12645 472 aa5.9□□□□□ -1.46
CD44-202ENST00000278385 SOX4Q06945 474 aaPredicted RBP5.9□□□□□ -1.46
CD44-202ENST00000278385 TAF1CQ15572 869 aaPredicted RBP5.9□□□□□ -1.46
CD44-202ENST00000278385 PAOXQ6QHF9 649 aa5.9□□□□□ -1.46
CD44-202ENST00000278385 Q6ZS46 218 aa5.9□□□□□ -1.46
CD44-202ENST00000278385 SLC51AQ86UW1 340 aa5.9□□□□□ -1.46
CD44-202ENST00000278385 JDP2Q8WYK2 163 aa5.9□□□□□ -1.46
CD44-202ENST00000278385 SCYL1Q96KG9 808 aa5.9□□□□□ -1.46
CD44-202ENST00000278385 FAM161BQ96MY7 647 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms