RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 GTF2A1P52655 376 aaPredicted RBP12.89□□□□□ -0.35
SKP2-202ENST00000274255 SLC7A5Q01650 507 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 PRPF4BQ13523 1007 aaKnown RBP12.89□□□□□ -0.35
SKP2-202ENST00000274255 MAATS1Q7Z4T9 603 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.89□□□□□ -0.35
SKP2-202ENST00000274255 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
SKP2-202ENST00000274255 EFCAB8A8MWE9 144 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 SARM1Q6SZW1 724 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 ATG9AQ7Z3C6 839 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 GDAQ9Y2T3 454 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 NEDD4P46934 1319 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 F8W031 263 aaPredicted RBP12.89□□□□□ -0.35
SKP2-202ENST00000274255 NMT2O60551 498 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
SKP2-202ENST00000274255 ANTXR2P58335 489 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 TBC1D8BQ0IIM8 1120 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 PTGDRQ13258 359 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 SND1Q7KZF4 910 aaKnown RBP eCLIP12.89□□□□□ -0.35
SKP2-202ENST00000274255 HDXQ7Z353 690 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
SKP2-202ENST00000274255 NAPGQ99747 312 aaPredicted RBP12.89□□□□□ -0.35
SKP2-202ENST00000274255 NLRC4Q9NPP4 1024 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
SKP2-202ENST00000274255 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
SKP2-202ENST00000274255 LLGL1Q15334 1064 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 LETM2Q2VYF4 491 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
SKP2-202ENST00000274255 FOXP4Q8IVH2 680 aaPredicted RBP12.88□□□□□ -0.35
SKP2-202ENST00000274255 ZNF654Q8IZM8 581 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
SKP2-202ENST00000274255 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
SKP2-202ENST00000274255 COL15A1P39059 1388 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 A0A1W2PQ27 194 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 A0A1W2PQ64 194 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 A0A1W2PQD8 194 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 G3V3G9 751 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 CDC25BP30305 580 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
SKP2-202ENST00000274255 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 TCERG1LQ5VWI1 586 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 BABAM1Q9NWV8 329 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 ADGRB2O60241 1585 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 TMCO5BA8MYB1 307 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 LCORLQ8N3X6 602 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 GPR161Q8N6U8 529 aaKnown RBP12.88□□□□□ -0.35
SKP2-202ENST00000274255 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
SKP2-202ENST00000274255 NELFBQ8WX92 580 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 ESR2Q92731 530 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 FAM204AQ9H8W3 233 aa12.88□□□□□ -0.35
SKP2-202ENST00000274255 GOLGA6L9A6NEM1 432 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 PP2D1A8MPX8 630 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 BUB1O43683 1085 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
SKP2-202ENST00000274255 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 MCM9Q9NXL9 1143 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 SMARCAL1Q9NZC9 954 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 USP17L12C9JPN9 530 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 USP17L21D6R901 530 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 KIAA0754O94854 1291 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 KRT2P35908 639 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 GUCY2FP51841 1108 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 CCDC42Q96M95 316 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 TRIM31Q9BZY9 425 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
SKP2-202ENST00000274255 PLEKHA8P1O95397 391 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 RILPL1Q5EBL4 403 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 CEP112Q8N8E3 955 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 MLKLQ8NB16 471 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 TNKSO95271 1327 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 PPARAQ07869 468 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
SKP2-202ENST00000274255 TTC38Q5R3I4 469 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 SPATA5Q8NB90 893 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 CHP1Q99653 195 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 FHOD1Q9Y613 1164 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 TADA3O75528 432 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 SASH3O75995 380 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 ABL1P00519 1130 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 ATL3Q6DD88 541 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 PLCD4Q9BRC7 762 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 C19orf44Q9H6X5 657 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 GOPCQ9HD26 462 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 MED23Q9ULK4 1368 aa12.86□□□□□ -0.35
SKP2-202ENST00000274255 MAGEB6P1A0A0J9YX57 407 aa12.85□□□□□ -0.35
SKP2-202ENST00000274255 SETQ01105 290 aaPredicted RBP12.85□□□□□ -0.35
SKP2-202ENST00000274255 SOGA3Q5TF21 947 aa12.85□□□□□ -0.35
SKP2-202ENST00000274255 DZIP1Q86YF9 867 aaKnown RBP12.85□□□□□ -0.35
SKP2-202ENST00000274255 SMCR8Q8TEV9 937 aaPredicted RBP12.85□□□□□ -0.35
SKP2-202ENST00000274255 HPS3Q969F9 1004 aa12.85□□□□□ -0.35
SKP2-202ENST00000274255 KRT23Q9C075 422 aa12.85□□□□□ -0.35
SKP2-202ENST00000274255 OSBPL5Q9H0X9 879 aaPredicted RBP12.85□□□□□ -0.35
SKP2-202ENST00000274255 DEPDC5O75140 1603 aa12.85□□□□□ -0.35
SKP2-202ENST00000274255 ZC3H13Q5T200 1668 aaKnown RBP12.85□□□□□ -0.35
SKP2-202ENST00000274255 CCT5P48643 541 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms