RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 A0A087X0B3 334 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 SRGAP2O75044 1071 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 GSPT2Q8IYD1 628 aaKnown RBP14.68□□□□□ -0.06
COL8A1-202ENST00000273342 PIH1D3Q9NQM4 214 aaKnown RBP14.68□□□□□ -0.06
COL8A1-202ENST00000273342 WWC3Q9ULE0 1092 aa14.68□□□□□ -0.06
COL8A1-202ENST00000273342 ZNF532Q9HCE3 1301 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 CTAGE15A4D2H0 777 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 ERLIN1O75477 346 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 CTAGE8P0CG41 777 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 CTAGE6Q86UF2 777 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 CTAGE4Q8IX94 777 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 NUP88Q99567 741 aaPredicted RBP14.67□□□□□ -0.06
COL8A1-202ENST00000273342 FAM204AQ9H8W3 233 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.67□□□□□ -0.06
COL8A1-202ENST00000273342 ZFYP08048 801 aaPredicted RBP14.67□□□□□ -0.06
COL8A1-202ENST00000273342 GPIHBP1Q8IV16 184 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 FBXL16Q8N461 479 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 CEP112Q8N8E3 955 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 IGDCC4Q8TDY8 1250 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 LY9Q9HBG7 655 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 GPR108Q9NPR9 543 aa14.67□□□□□ -0.06
COL8A1-202ENST00000273342 CPDO75976 1380 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 PRDM1O75626 825 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 FKBP15Q5T1M5 1219 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 AIDAQ96BJ3 306 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 DACH1Q9UI36 760 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 LMO7Q8WWI1 1683 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 A0A1B0GTH6 734 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 EIF3JO75822 258 aaKnown RBP14.66□□□□□ -0.06
COL8A1-202ENST00000273342 PLCD1P51178 756 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 MRPS25P82663 173 aaKnown RBP14.66□□□□□ -0.06
COL8A1-202ENST00000273342 LDHAL6AQ6ZMR3 332 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 CTNND2Q9UQB3 1225 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 SYNRGQ9UMZ2 1314 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 N4BP3O15049 544 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 PRKAB2O43741 272 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 GYPCP04921 128 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 PTPREP23469 700 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.66□□□□□ -0.06
COL8A1-202ENST00000273342 TAB2Q9NYJ8 693 aa14.66□□□□□ -0.06
COL8A1-202ENST00000273342 MFAP3LO75121 409 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 ERVK-24P63145 666 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 NOM1Q5C9Z4 860 aaKnown RBP14.65□□□□□ -0.06
COL8A1-202ENST00000273342 CHP1Q99653 195 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 CNNM1Q9NRU3 951 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 ATG3Q9NT62 314 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 TACC3Q9Y6A5 838 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 ACTN4O43707 911 aaKnown RBP14.65□□□□□ -0.06
COL8A1-202ENST00000273342 MMP1P03956 469 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 DPYDQ12882 1025 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 IFIT5Q13325 482 aaKnown RBP14.65□□□□□ -0.06
COL8A1-202ENST00000273342 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.65□□□□□ -0.06
COL8A1-202ENST00000273342 DCAF5Q96JK2 942 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 NAPGQ99747 312 aaPredicted RBP14.65□□□□□ -0.06
COL8A1-202ENST00000273342 ARMT1Q9H993 441 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 VPS54Q9P1Q0 977 aa14.65□□□□□ -0.06
COL8A1-202ENST00000273342 C5P01031 1676 aa14.64□□□□□ -0.07
COL8A1-202ENST00000273342 SMIM22K7EJ46 135 aa14.64□□□□□ -0.07
COL8A1-202ENST00000273342 SARSP49591 514 aaKnown RBP14.64□□□□□ -0.07
COL8A1-202ENST00000273342 EARS2Q5JPH6 523 aaKnown RBP14.64□□□□□ -0.07
COL8A1-202ENST00000273342 NAPBQ9H115 298 aa14.64□□□□□ -0.07
COL8A1-202ENST00000273342 EIF3CLB5ME19 914 aaKnown RBP14.64□□□□□ -0.07
COL8A1-202ENST00000273342 WNT7AO00755 349 aa14.64□□□□□ -0.07
COL8A1-202ENST00000273342 ADD2P35612 726 aa14.64□□□□□ -0.07
COL8A1-202ENST00000273342 PHKA1P46020 1223 aa14.64□□□□□ -0.07
COL8A1-202ENST00000273342 APTXQ7Z2E3 356 aaKnown RBP14.64□□□□□ -0.07
COL8A1-202ENST00000273342 TRIM22Q8IYM9 498 aa14.64□□□□□ -0.07
COL8A1-202ENST00000273342 PANX2Q96RD6 677 aa14.64□□□□□ -0.07
COL8A1-202ENST00000273342 EIF3CQ99613 913 aaKnown RBP14.64□□□□□ -0.07
COL8A1-202ENST00000273342 ADD3Q9UEY8 706 aaKnown RBP14.64□□□□□ -0.07
COL8A1-202ENST00000273342 ATF3P18847 181 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 ZNF174Q15697 407 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 FILIP1LQ4L180 1135 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 LRRC31Q6UY01 552 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 PACS2Q86VP3 889 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 FAM237AA0A1B0GTK4 181 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 RNF40O75150 1001 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 SPATA1Q5VX52 437 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 TTC19Q6DKK2 380 aaPredicted RBP14.63□□□□□ -0.07
COL8A1-202ENST00000273342 TOM1L2Q6ZVM7 507 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 MBD4O95243 580 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 KRT9P35527 623 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 RTN1Q16799 776 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 MIGA1Q8NAN2 632 aa14.63□□□□□ -0.07
COL8A1-202ENST00000273342 SYMPKQ92797 1274 aaKnown RBP14.63□□□□□ -0.07
COL8A1-202ENST00000273342 PDE6AP16499 860 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 PPARDQ03181 441 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 RRAGBQ5VZM2 374 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 GOLGA6L1Q8N7Z2 621 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 DRC1Q96MC2 740 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 MYO6Q9UM54 1294 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 NWD2Q9ULI1 1742 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 MEGF6O75095 1541 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 FMNL1O95466 1100 aaPredicted RBP14.62□□□□□ -0.07
COL8A1-202ENST00000273342 AFDNP55196 1824 aaKnown RBP14.62□□□□□ -0.07
COL8A1-202ENST00000273342 RILPL1Q5EBL4 403 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 DNAJC21Q5F1R6 531 aaKnown RBP14.62□□□□□ -0.07
COL8A1-202ENST00000273342 MAGEB6Q8N7X4 407 aa14.62□□□□□ -0.07
COL8A1-202ENST00000273342 MSANTD4Q8NCY6 345 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms