RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 U2AF1Q01081 240 aaKnown RBP eCLIP12.81□□□□□ -0.36
LRTM1-201ENST00000273286 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
LRTM1-201ENST00000273286 RAB44Q7Z6P3 723 aaPredicted RBP12.81□□□□□ -0.36
LRTM1-201ENST00000273286 ZNF622Q969S3 477 aaKnown RBP eCLIP12.81□□□□□ -0.36
LRTM1-201ENST00000273286 PHACTR3Q96KR7 559 aa12.81□□□□□ -0.36
LRTM1-201ENST00000273286 NOP53Q9NZM5 478 aaKnown RBP12.81□□□□□ -0.36
LRTM1-201ENST00000273286 TIAM2Q8IVF5 1701 aa12.81□□□□□ -0.36
LRTM1-201ENST00000273286 SIN3BO75182 1162 aa12.8□□□□□ -0.36
LRTM1-201ENST00000273286 A1BGP04217 495 aa12.8□□□□□ -0.36
LRTM1-201ENST00000273286 CNGB1Q14028 1251 aaPredicted RBP12.8□□□□□ -0.36
LRTM1-201ENST00000273286 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
LRTM1-201ENST00000273286 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
LRTM1-201ENST00000273286 BCORQ6W2J9 1755 aa12.8□□□□□ -0.36
LRTM1-201ENST00000273286 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
LRTM1-201ENST00000273286 SRGNP10124 158 aa12.79□□□□□ -0.36
LRTM1-201ENST00000273286 ALAS2P22557 587 aa12.79□□□□□ -0.36
LRTM1-201ENST00000273286 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
LRTM1-201ENST00000273286 TAOK3Q9H2K8 898 aa12.79□□□□□ -0.36
LRTM1-201ENST00000273286 KCNH4Q9UQ05 1017 aa12.79□□□□□ -0.36
LRTM1-201ENST00000273286 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
LRTM1-201ENST00000273286 NBPF5PQ86XG9 351 aaPredicted RBP12.79□□□□□ -0.36
LRTM1-201ENST00000273286 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
LRTM1-201ENST00000273286 MDFIQ99750 246 aa12.79□□□□□ -0.36
LRTM1-201ENST00000273286 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
LRTM1-201ENST00000273286 FER1L6Q2WGJ9 1857 aa12.78□□□□□ -0.36
LRTM1-201ENST00000273286 HIF1AQ16665 826 aa12.78□□□□□ -0.36
LRTM1-201ENST00000273286 CCDC88AQ3V6T2 1871 aa12.78□□□□□ -0.36
LRTM1-201ENST00000273286 DICER1Q9UPY3 1922 aaKnown RBP12.78□□□□□ -0.36
LRTM1-201ENST00000273286 ARFGEF2Q9Y6D5 1785 aa12.77□□□□□ -0.37
LRTM1-201ENST00000273286 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.37
LRTM1-201ENST00000273286 IGFBP4P22692 258 aa12.77□□□□□ -0.37
LRTM1-201ENST00000273286 PRELPP51888 382 aa12.77□□□□□ -0.37
LRTM1-201ENST00000273286 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
LRTM1-201ENST00000273286 PRPF40BQ6NWY9 871 aaKnown RBP12.77□□□□□ -0.37
LRTM1-201ENST00000273286 MCM10Q7L590 875 aa12.77□□□□□ -0.37
LRTM1-201ENST00000273286 BTLAQ7Z6A9 289 aa12.77□□□□□ -0.37
LRTM1-201ENST00000273286 PNNQ9H307 717 aaKnown RBP12.77□□□□□ -0.37
LRTM1-201ENST00000273286 KLRG2A4D1S0 409 aaPredicted RBP12.76□□□□□ -0.37
LRTM1-201ENST00000273286 IQCA1LA6NCM1 817 aa12.76□□□□□ -0.37
LRTM1-201ENST00000273286 ADARB2-AS1A8MUL3 147 aa12.76□□□□□ -0.37
LRTM1-201ENST00000273286 KCNQ3O43525 872 aa12.76□□□□□ -0.37
LRTM1-201ENST00000273286 NPR1P16066 1061 aa12.76□□□□□ -0.37
LRTM1-201ENST00000273286 TNFRSF25Q93038 417 aa12.76□□□□□ -0.37
LRTM1-201ENST00000273286 TRIM11Q96F44 468 aa12.76□□□□□ -0.37
LRTM1-201ENST00000273286 RTN1Q16799 776 aa12.75□□□□□ -0.37
LRTM1-201ENST00000273286 CCDC93Q567U6 631 aa12.75□□□□□ -0.37
LRTM1-201ENST00000273286 NIP7Q9Y221 180 aaKnown RBP eCLIP12.75□□□□□ -0.37
LRTM1-201ENST00000273286 ALDH1B1P30837 517 aa12.74□□□□□ -0.37
LRTM1-201ENST00000273286 SLX4Q8IY92 1834 aa12.73□□□□□ -0.37
LRTM1-201ENST00000273286 ADH7P40394 386 aa12.73□□□□□ -0.37
LRTM1-201ENST00000273286 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
LRTM1-201ENST00000273286 BHMTQ93088 406 aa12.73□□□□□ -0.37
LRTM1-201ENST00000273286 NYXQ9GZU5 481 aa12.73□□□□□ -0.37
LRTM1-201ENST00000273286 LAMB4A4D0S4 1761 aa12.73□□□□□ -0.37
LRTM1-201ENST00000273286 ERVV-1B6SEH8 477 aa12.72□□□□□ -0.37
LRTM1-201ENST00000273286 HTRA3P83110 453 aa12.72□□□□□ -0.37
LRTM1-201ENST00000273286 PLVAPQ9BX97 442 aa12.72□□□□□ -0.37
LRTM1-201ENST00000273286 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.37
LRTM1-201ENST00000273286 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.37
LRTM1-201ENST00000273286 FKBP4Q02790 459 aaKnown RBP eCLIP12.71□□□□□ -0.37
LRTM1-201ENST00000273286 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
LRTM1-201ENST00000273286 IER5Q5VY09 327 aa12.71□□□□□ -0.37
LRTM1-201ENST00000273286 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.37
LRTM1-201ENST00000273286 IBTKQ9P2D0 1353 aaPredicted RBP12.71□□□□□ -0.37
LRTM1-201ENST00000273286 SCN4AP35499 1836 aa12.71□□□□□ -0.38
LRTM1-201ENST00000273286 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.38
LRTM1-201ENST00000273286 LOC100996750A0A140TA64 210 aa12.71□□□□□ -0.38
LRTM1-201ENST00000273286 TGFBR3LH3BV60 316 aa12.71□□□□□ -0.38
LRTM1-201ENST00000273286 M0R082 166 aa12.71□□□□□ -0.38
LRTM1-201ENST00000273286 ZNF417Q8TAU3 575 aa12.71□□□□□ -0.38
LRTM1-201ENST00000273286 ZNF587Q96SQ5 575 aaPredicted RBP12.71□□□□□ -0.38
LRTM1-201ENST00000273286 KRTAP4-6Q9BYQ5 205 aa12.71□□□□□ -0.38
LRTM1-201ENST00000273286 CACNA1SQ13698 1873 aa12.7□□□□□ -0.38
LRTM1-201ENST00000273286 PCNTO95613 3336 aa12.7□□□□□ -0.38
LRTM1-201ENST00000273286 C1QTNF9BB2RNN3 333 aa12.7□□□□□ -0.38
LRTM1-201ENST00000273286 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
LRTM1-201ENST00000273286 NFE2L2Q16236 605 aa12.7□□□□□ -0.38
LRTM1-201ENST00000273286 CRY2Q49AN0 593 aa12.7□□□□□ -0.38
LRTM1-201ENST00000273286 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
LRTM1-201ENST00000273286 LDHDQ86WU2 507 aa12.7□□□□□ -0.38
LRTM1-201ENST00000273286 STARD13Q9Y3M8 1113 aa12.7□□□□□ -0.38
LRTM1-201ENST00000273286 KDM3BQ7LBC6 1761 aa12.69□□□□□ -0.38
LRTM1-201ENST00000273286 MAP3K15Q6ZN16 1313 aa12.69□□□□□ -0.38
LRTM1-201ENST00000273286 ALBP02768 609 aa12.69□□□□□ -0.38
LRTM1-201ENST00000273286 RFX1P22670 979 aa12.69□□□□□ -0.38
LRTM1-201ENST00000273286 CHRNA4P43681 627 aa12.69□□□□□ -0.38
LRTM1-201ENST00000273286 TBC1D8BQ0IIM8 1120 aa12.69□□□□□ -0.38
LRTM1-201ENST00000273286 PNMA8AQ86V59 439 aaPredicted RBP12.69□□□□□ -0.38
LRTM1-201ENST00000273286 CD163Q86VB7 1156 aa12.69□□□□□ -0.38
LRTM1-201ENST00000273286 FAM200AQ8TCP9 573 aa12.69□□□□□ -0.38
LRTM1-201ENST00000273286 PSMD1Q99460 953 aa12.69□□□□□ -0.38
LRTM1-201ENST00000273286 WEE1P30291 646 aa12.68□□□□□ -0.38
LRTM1-201ENST00000273286 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
LRTM1-201ENST00000273286 HLFQ16534 295 aa12.68□□□□□ -0.38
LRTM1-201ENST00000273286 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
LRTM1-201ENST00000273286 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
LRTM1-201ENST00000273286 KLK14Q9P0G3 267 aa12.68□□□□□ -0.38
LRTM1-201ENST00000273286 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
LRTM1-201ENST00000273286 JDP2Q8WYK2 163 aa12.67□□□□□ -0.38
LRTM1-201ENST00000273286 VTI1AQ96AJ9 217 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms