RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 EBAG9O00559 213 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 ZSCAN9O15535 394 aaPredicted RBP9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 RASA4O43374 803 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 MGEA5O60502 916 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 KRT13P13646 458 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 METTL24Q5JXM2 366 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 BICD2Q8TD16 824 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 DNAJC5Q9H3Z4 198 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 HOMER3Q9NSC5 361 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 EMC3Q9P0I2 261 aa9.95□□□□□ -0.82
CTDSPL-201ENST00000273179 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 AKR1B10O60218 316 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 ACTN2P35609 894 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 HALP42357 657 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 FERMT3Q86UX7 667 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 LSM14AQ8ND56 463 aaKnown RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 RBM17Q96I25 401 aaKnown RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 ATPIF1Q9UII2 106 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 DISP3Q9P2K9 1392 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 SGTAO43765 313 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 SKAP2O75563 359 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 NCBP1Q09161 790 aaKnown RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 SLC5A9Q2M3M2 681 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 SPATS2Q86XZ4 545 aaKnown RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 ABTB1Q969K4 478 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 RUNDC1Q96C34 613 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 ABCG4Q9H172 646 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 GOLGA8JA6NMD2 632 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 GOLGA8TH3BQL2 631 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 AP3B1O00203 1094 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 XPOTO43592 962 aaKnown RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 GOLGA8HP0CJ92 632 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 PDAP1Q13442 181 aaKnown RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 MUC3BQ9H195 1237 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 ADGRL1O94910 1474 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 TNNI3KQ59H18 835 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 TAOK1Q7L7X3 1001 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 SNX21Q969T3 373 aa9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 BARX2Q9UMQ3 279 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL-201ENST00000273179 KDM5CP41229 1560 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 FOXN3O00409 490 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 ZNF16P17020 682 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 CENPAP49450 140 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 EVCP57679 992 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 LETM2Q2VYF4 491 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 SLC44A4Q53GD3 710 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 DZIP1LQ8IYY4 767 aaKnown RBP9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 GINM1Q9NU53 330 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 PRAG1Q86YV5 1406 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 MACROD2A1Z1Q3 448 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 SEMA3EO15041 775 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 TXLNAP40222 546 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 CCDC38Q502W7 563 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 TRIM50Q86XT4 487 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 MFN1Q8IWA4 741 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 SEPT8Q92599 483 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 PAWRQ96IZ0 340 aaKnown RBP9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 UQCC2Q9BRT2 126 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 MTRF1LQ9UGC7 380 aaKnown RBP9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 UGGT1Q9NYU2 1555 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 SMG6Q86US8 1419 aaKnown RBP9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 POTEFA5A3E0 1075 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 TMEM110-MUSTN1A8MSY1 372 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 TMEM127O75204 238 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 TSHZ3Q63HK5 1081 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 CCDC50Q8IVM0 306 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 BRSK2Q8IWQ3 736 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 ARHGAP18Q8N392 663 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 CEP112Q8N8E3 955 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 TEX19Q8NA77 164 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 SMC1BQ8NDV3 1235 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 RPGRIP1Q96KN7 1286 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 CNGB3Q9NQW8 809 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 POLG2Q9UHN1 485 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 ABCC1P33527 1531 aa9.93□□□□□ -0.82
CTDSPL-201ENST00000273179 GUCY2FP51841 1108 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 CFAP70Q5T0N1 1121 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 ZNF713Q8N859 430 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 RHBDL2Q9NX52 303 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 DSEQ9UL01 958 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 RALGAPBQ86X10 1494 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 A0A1W2PRQ8 180 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 RTN3O95197 1032 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 RASA2Q15283 850 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 RPAP2Q8IXW5 612 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 SPAG5Q96R06 1193 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 GTF3C4Q9UKN8 822 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 A6NJR5 290 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 SPDYE16A6NNV3 312 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 SPTLC2O15270 562 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 TACC1O75410 805 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 TAF7Q15545 349 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 KRT20P35900 424 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 MXRA7P84157 204 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 RASGRP2Q7LDG7 609 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 TRIML2Q8N7C3 387 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms