RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 VGLL2Q8N8G2 317 aa31.35■■■□□ 2.61
CBX4-201ENST00000269397 ADAMTSL3P82987 1691 aa31.35■■■□□ 2.61
CBX4-201ENST00000269397 ANKRD18BA2A2Z9 1011 aa31.34■■■□□ 2.61
CBX4-201ENST00000269397 PLCD1P51178 756 aa31.34■■■□□ 2.61
CBX4-201ENST00000269397 RILPL1Q5EBL4 403 aa31.34■■■□□ 2.61
CBX4-201ENST00000269397 BBXQ8WY36 941 aaPredicted RBP31.34■■■□□ 2.61
CBX4-201ENST00000269397 ATRNO75882 1429 aa31.34■■■□□ 2.61
CBX4-201ENST00000269397 LONRF2Q1L5Z9 754 aa31.34■■■□□ 2.61
CBX4-201ENST00000269397 IGSF22Q8N9C0 903 aa31.34■■■□□ 2.61
CBX4-201ENST00000269397 A0A087X0B3 334 aa31.33■■■□□ 2.61
CBX4-201ENST00000269397 A0A1B0GTH6 734 aa31.33■■■□□ 2.61
CBX4-201ENST00000269397 PATL2C9JE40 543 aaKnown RBP31.33■■■□□ 2.61
CBX4-201ENST00000269397 PDE8BO95263 885 aa31.33■■■□□ 2.61
CBX4-201ENST00000269397 CD44P16070 742 aaKnown RBP31.33■■■□□ 2.61
CBX4-201ENST00000269397 TXLNAP40222 546 aa31.33■■■□□ 2.61
CBX4-201ENST00000269397 TRIM28Q13263 835 aaKnown RBP31.33■■■□□ 2.61
CBX4-201ENST00000269397 WASF1Q92558 559 aa31.33■■■□□ 2.61
CBX4-201ENST00000269397 EPSTI1Q96J88 318 aa31.33■■■□□ 2.61
CBX4-201ENST00000269397 MFSD6Q6ZSS7 791 aa31.33■■■□□ 2.61
CBX4-201ENST00000269397 CAPN2P17655 700 aa31.32■■■□□ 2.61
CBX4-201ENST00000269397 AKNAD1Q5T1N1 836 aa31.32■■■□□ 2.61
CBX4-201ENST00000269397 ADGRG1Q9Y653 693 aa31.32■■■□□ 2.61
CBX4-201ENST00000269397 CHMP4BP1P59074 171 aa31.32■■■□□ 2.6
CBX4-201ENST00000269397 ELOA2Q8IYF1 753 aaPredicted RBP31.32■■■□□ 2.6
CBX4-201ENST00000269397 SRPRBQ9Y5M8 271 aaKnown RBP31.32■■■□□ 2.6
CBX4-201ENST00000269397 H3BQF6 201 aa31.32■■■□□ 2.6
CBX4-201ENST00000269397 CTSWP56202 376 aa31.32■■■□□ 2.6
CBX4-201ENST00000269397 APTXQ7Z2E3 356 aaKnown RBP31.32■■■□□ 2.6
CBX4-201ENST00000269397 FOXP1Q9H334 677 aaPredicted RBP31.32■■■□□ 2.6
CBX4-201ENST00000269397 hCG_1642624A0A1W2PR95 340 aa31.31■■■□□ 2.6
CBX4-201ENST00000269397 WTAPQ15007 396 aa31.31■■■□□ 2.6
CBX4-201ENST00000269397 PPFIBP1Q86W92 1011 aa31.31■■■□□ 2.6
CBX4-201ENST00000269397 UBR2Q8IWV8 1755 aa31.31■■■□□ 2.6
CBX4-201ENST00000269397 ASAP1Q9ULH1 1129 aa31.31■■■□□ 2.6
CBX4-201ENST00000269397 NLRP10Q86W26 655 aa31.3■■■□□ 2.6
CBX4-201ENST00000269397 CRACR2BQ8N4Y2 399 aaPredicted RBP31.3■■■□□ 2.6
CBX4-201ENST00000269397 STAMQ92783 540 aa31.3■■■□□ 2.6
CBX4-201ENST00000269397 GSG1L2A8MUP6 293 aa31.3■■■□□ 2.6
CBX4-201ENST00000269397 ABL1P00519 1130 aa31.3■■■□□ 2.6
CBX4-201ENST00000269397 ZNF569Q5MCW4 686 aa31.3■■■□□ 2.6
CBX4-201ENST00000269397 IRS4O14654 1257 aaPredicted RBP31.29■■■□□ 2.6
CBX4-201ENST00000269397 TDO2P48775 406 aa31.29■■■□□ 2.6
CBX4-201ENST00000269397 MCM6Q14566 821 aa31.29■■■□□ 2.6
CBX4-201ENST00000269397 TRIML1Q8N9V2 468 aa31.29■■■□□ 2.6
CBX4-201ENST00000269397 ZNF512BQ96KM6 892 aaPredicted RBP31.29■■■□□ 2.6
CBX4-201ENST00000269397 PRDM11Q9NQV5 511 aa31.29■■■□□ 2.6
CBX4-201ENST00000269397 GTF2E1P29083 439 aaPredicted RBP31.29■■■□□ 2.6
CBX4-201ENST00000269397 PANX2Q96RD6 677 aa31.29■■■□□ 2.6
CBX4-201ENST00000269397 CASP14P31944 242 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 TXLNBQ8N3L3 684 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 ARID4AP29374 1257 aaPredicted RBP31.28■■■□□ 2.6
CBX4-201ENST00000269397 ALX1Q15699 326 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 EARS2Q5JPH6 523 aaKnown RBP31.28■■■□□ 2.6
CBX4-201ENST00000269397 SRGAP1Q7Z6B7 1085 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 SPATA5Q8NB90 893 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 SPATA20Q8TB22 786 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 SHISA4Q96DD7 197 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 ANKZF1Q9H8Y5 726 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 SUGCTQ9HAC7 445 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 SYNRGQ9UMZ2 1314 aa31.28■■■□□ 2.6
CBX4-201ENST00000269397 DEXIO95424 95 aa31.27■■■□□ 2.6
CBX4-201ENST00000269397 ERCC5P28715 1186 aaPredicted RBP31.27■■■□□ 2.6
CBX4-201ENST00000269397 RAD51AP2Q09MP3 1159 aa31.27■■■□□ 2.6
CBX4-201ENST00000269397 TRMT112Q9UI30 125 aaKnown RBP31.27■■■□□ 2.6
CBX4-201ENST00000269397 TULP2O00295 520 aa31.27■■■□□ 2.6
CBX4-201ENST00000269397 KIF5CO60282 957 aa31.27■■■□□ 2.6
CBX4-201ENST00000269397 RASGRF1Q13972 1273 aa31.27■■■□□ 2.6
CBX4-201ENST00000269397 GIGYF2Q6Y7W6 1299 aaKnown RBP31.27■■■□□ 2.6
CBX4-201ENST00000269397 LCORLQ8N3X6 602 aa31.27■■■□□ 2.6
CBX4-201ENST00000269397 ZNF579Q8NAF0 562 aaKnown RBP31.27■■■□□ 2.6
CBX4-201ENST00000269397 PNKPQ96T60 521 aa31.27■■■□□ 2.6
CBX4-201ENST00000269397 STRN4Q9NRL3 753 aa31.27■■■□□ 2.6
CBX4-201ENST00000269397 PARP4Q9UKK3 1724 aaKnown RBP31.26■■■□□ 2.6
CBX4-201ENST00000269397 MAPK8IP2Q13387 824 aaPredicted RBP31.26■■■□□ 2.6
CBX4-201ENST00000269397 MIGA1Q8NAN2 632 aa31.26■■■□□ 2.6
CBX4-201ENST00000269397 ACRBPQ8NEB7 543 aa31.26■■■□□ 2.6
CBX4-201ENST00000269397 KRT23Q9C075 422 aa31.26■■■□□ 2.6
CBX4-201ENST00000269397 CNNM2Q9H8M5 875 aa31.26■■■□□ 2.6
CBX4-201ENST00000269397 VPS54Q9P1Q0 977 aa31.26■■■□□ 2.6
CBX4-201ENST00000269397 MAP3K15Q6ZN16 1313 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 CCDC151A5D8V7 595 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 SMIM22K7EJ46 135 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 CCT6AP40227 531 aaKnown RBP31.26■■■□□ 2.59
CBX4-201ENST00000269397 SPATA1Q5VX52 437 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 WWC2Q6AWC2 1192 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 KANK3Q6NY19 840 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 CDC5LQ99459 802 aaKnown RBP31.26■■■□□ 2.59
CBX4-201ENST00000269397 TMOD3Q9NYL9 352 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 ADAM21Q9UKJ8 722 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 WDR17Q8IZU2 1322 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 TNS3Q68CZ2 1445 aa31.26■■■□□ 2.59
CBX4-201ENST00000269397 PRDM1O75626 825 aa31.25■■■□□ 2.59
CBX4-201ENST00000269397 KIF4BQ2VIQ3 1234 aa31.25■■■□□ 2.59
CBX4-201ENST00000269397 ADD3Q9UEY8 706 aaKnown RBP31.25■■■□□ 2.59
CBX4-201ENST00000269397 SLC4A4Q9Y6R1 1079 aa31.25■■■□□ 2.59
CBX4-201ENST00000269397 WNT7AO00755 349 aa31.25■■■□□ 2.59
CBX4-201ENST00000269397 LMAN1P49257 510 aa31.25■■■□□ 2.59
CBX4-201ENST00000269397 FXR1P51114 621 aaKnown RBP eCLIP31.25■■■□□ 2.59
CBX4-201ENST00000269397 FANCBQ8NB91 859 aa31.25■■■□□ 2.59
CBX4-201ENST00000269397 ZNF142P52746 1687 aaPredicted RBP31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms