RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 TMOD4Q9NZQ9 345 aa21.3■■□□□ 1
CSNK1D-201ENST00000269361 ZBTB21Q9ULJ3 1066 aa21.3■■□□□ 1
CSNK1D-201ENST00000269361 DDX19BQ9UMR2 479 aa21.3■■□□□ 1
CSNK1D-201ENST00000269361 COG6Q9Y2V7 657 aa21.3■■□□□ 1
CSNK1D-201ENST00000269361 MAST2Q6P0Q8 1798 aa21.3■■□□□ 1
CSNK1D-201ENST00000269361 C19orf81C9J6K1 198 aa21.29■■□□□ 1
CSNK1D-201ENST00000269361 SIRT2Q8IXJ6 389 aa21.29■■□□□ 1
CSNK1D-201ENST00000269361 CLASRPQ8N2M8 674 aaKnown RBP21.29■■□□□ 1
CSNK1D-201ENST00000269361 UNC93B1Q9H1C4 597 aa21.29■■□□□ 1
CSNK1D-201ENST00000269361 USP17L10C9JJH3 530 aa21.28■■□□□ 1
CSNK1D-201ENST00000269361 APBB1O00213 710 aa21.28■■□□□ 1
CSNK1D-201ENST00000269361 HMMRO75330 724 aa21.28■■□□□ 1
CSNK1D-201ENST00000269361 INHAP05111 366 aa21.28■■□□□ 1
CSNK1D-201ENST00000269361 HOXA7P31268 230 aaPredicted RBP21.28■■□□□ 1
CSNK1D-201ENST00000269361 TTF1Q15361 905 aaPredicted RBP21.28■■□□□ 1
CSNK1D-201ENST00000269361 KIF1BPQ96EK5 621 aa21.28■■□□□ 1
CSNK1D-201ENST00000269361 TAOK2Q9UL54 1235 aa21.28■■□□□ 1
CSNK1D-201ENST00000269361 IRX3P78415 501 aaPredicted RBP21.27■■□□□ 1
CSNK1D-201ENST00000269361 HABP4Q5JVS0 413 aaKnown RBP21.27■■□□□ 1
CSNK1D-201ENST00000269361 TATDN1Q6P1N9 297 aa21.27■■□□□ 1
CSNK1D-201ENST00000269361 U2AF1L4Q8WU68 220 aaKnown RBP21.27■■□□□ 1
CSNK1D-201ENST00000269361 P2RX7Q99572 595 aaKnown RBP21.27■■□□□ 1
CSNK1D-201ENST00000269361 MORF4L1Q9UBU8 362 aa21.27■■□□□ 1
CSNK1D-201ENST00000269361 PTPRFP10586 1907 aa21.26■□□□□ 0.99
CSNK1D-201ENST00000269361 GH2P01242 217 aa21.26■□□□□ 0.99
CSNK1D-201ENST00000269361 IFIT2P09913 472 aaKnown RBP21.26■□□□□ 0.99
CSNK1D-201ENST00000269361 UBE2Q1Q7Z7E8 422 aa21.26■□□□□ 0.99
CSNK1D-201ENST00000269361 TTC6Q86TZ1 520 aa21.26■□□□□ 0.99
CSNK1D-201ENST00000269361 RIOK1Q9BRS2 568 aaKnown RBP21.26■□□□□ 0.99
CSNK1D-201ENST00000269361 EHD4Q9H223 541 aa21.26■□□□□ 0.99
CSNK1D-201ENST00000269361 SERPINB13Q9UIV8 391 aa21.26■□□□□ 0.99
CSNK1D-201ENST00000269361 RCAN3Q9UKA8 241 aa21.26■□□□□ 0.99
CSNK1D-201ENST00000269361 MAGEB6P1A0A0J9YX57 407 aa21.25■□□□□ 0.99
CSNK1D-201ENST00000269361 RAB11FIP3O75154 756 aa21.25■□□□□ 0.99
CSNK1D-201ENST00000269361 SGPL1O95470 568 aa21.25■□□□□ 0.99
CSNK1D-201ENST00000269361 SLC9C2Q5TAH2 1124 aa21.25■□□□□ 0.99
CSNK1D-201ENST00000269361 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.25■□□□□ 0.99
CSNK1D-201ENST00000269361 CHMP4BQ9H444 224 aaKnown RBP21.25■□□□□ 0.99
CSNK1D-201ENST00000269361 EMILIN3Q9NT22 766 aa21.25■□□□□ 0.99
CSNK1D-201ENST00000269361 GJD2Q9UKL4 321 aa21.25■□□□□ 0.99
CSNK1D-201ENST00000269361 SIPA1L1O43166 1804 aa21.25■□□□□ 0.99
CSNK1D-201ENST00000269361 LOC285556D6RIA3 1793 aa21.24■□□□□ 0.99
CSNK1D-201ENST00000269361 H0YGN5 161 aa21.24■□□□□ 0.99
CSNK1D-201ENST00000269361 PDE6AP16499 860 aa21.24■□□□□ 0.99
CSNK1D-201ENST00000269361 HERVK_113P62684 666 aa21.24■□□□□ 0.99
CSNK1D-201ENST00000269361 USP17L2Q6R6M4 530 aa21.24■□□□□ 0.99
CSNK1D-201ENST00000269361 BCL11AQ9H165 835 aa21.24■□□□□ 0.99
CSNK1D-201ENST00000269361 GOLIM4O00461 696 aa21.23■□□□□ 0.99
CSNK1D-201ENST00000269361 CERKLQ49MI3 558 aaPredicted RBP21.23■□□□□ 0.99
CSNK1D-201ENST00000269361 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
CSNK1D-201ENST00000269361 DPF3Q92784 378 aa21.23■□□□□ 0.99
CSNK1D-201ENST00000269361 DNAJC2Q99543 621 aaKnown RBP21.23■□□□□ 0.99
CSNK1D-201ENST00000269361 TFRCP02786 760 aaKnown RBP21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 CAPN2P17655 700 aa21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 PLCD1P51178 756 aa21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 DEFB118Q96PH6 123 aa21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 CRNKL1Q9BZJ0 848 aaKnown RBP21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 TXNRD2Q9NNW7 524 aa21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 PAK6Q9NQU5 681 aaPredicted RBP21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 PCDH10Q9P2E7 1040 aa21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 RBPJLQ9UBG7 517 aa21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 ZNF532Q9HCE3 1301 aa21.22■□□□□ 0.99
CSNK1D-201ENST00000269361 PEX10O60683 326 aa21.21■□□□□ 0.99
CSNK1D-201ENST00000269361 FARP2O94887 1054 aaPredicted RBP21.21■□□□□ 0.99
CSNK1D-201ENST00000269361 POLR3DP05423 398 aaPredicted RBP21.21■□□□□ 0.99
CSNK1D-201ENST00000269361 RAB3GAP1Q15042 981 aa21.21■□□□□ 0.99
CSNK1D-201ENST00000269361 ABCB5Q2M3G0 1257 aa21.21■□□□□ 0.99
CSNK1D-201ENST00000269361 HTATIP2Q9BUP3 242 aa21.21■□□□□ 0.99
CSNK1D-201ENST00000269361 COLQQ9Y215 455 aaPredicted RBP21.21■□□□□ 0.99
CSNK1D-201ENST00000269361 ATAD5Q96QE3 1844 aa21.2■□□□□ 0.98
CSNK1D-201ENST00000269361 MGAMO43451 1857 aa21.2■□□□□ 0.98
CSNK1D-201ENST00000269361 TCRBV5S4A2TA0A5A2 114 aa21.2■□□□□ 0.98
CSNK1D-201ENST00000269361 HMGCRP04035 888 aa21.2■□□□□ 0.98
CSNK1D-201ENST00000269361 SHMT1P34896 483 aa21.2■□□□□ 0.98
CSNK1D-201ENST00000269361 EDC3Q96F86 508 aaKnown RBP21.2■□□□□ 0.98
CSNK1D-201ENST00000269361 C12orf42Q96LP6 360 aa21.2■□□□□ 0.98
CSNK1D-201ENST00000269361 FEZ1Q99689 392 aa21.2■□□□□ 0.98
CSNK1D-201ENST00000269361 MYO5AQ9Y4I1 1855 aaKnown RBP21.2■□□□□ 0.98
CSNK1D-201ENST00000269361 ZYXQ15942 572 aaKnown RBP21.19■□□□□ 0.98
CSNK1D-201ENST00000269361 GTF3C2Q8WUA4 911 aaPredicted RBP21.19■□□□□ 0.98
CSNK1D-201ENST00000269361 KIAA1683Q9H0B3 1180 aa21.19■□□□□ 0.98
CSNK1D-201ENST00000269361 CRISPLD2Q9H0B8 497 aa21.19■□□□□ 0.98
CSNK1D-201ENST00000269361 CABP5Q9NP86 173 aa21.19■□□□□ 0.98
CSNK1D-201ENST00000269361 MCM9Q9NXL9 1143 aa21.19■□□□□ 0.98
CSNK1D-201ENST00000269361 FOCADQ5VW36 1801 aa21.19■□□□□ 0.98
CSNK1D-201ENST00000269361 USP17L15C9J2P7 530 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 USP17L13C9JLJ4 530 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 USP17L11C9JVI0 530 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 USP17L18D6R9N7 530 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 USP17L22D6RA61 530 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 USP17L17D6RBQ6 530 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 USP17L19D6RCP7 530 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 USP17L20D6RJB6 530 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 ATP5JP18859 108 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 MAPK4P31152 587 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 USP14P54578 494 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 GABPAQ06546 454 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 USP17L24Q0WX57 530 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 PDE3AQ14432 1141 aa21.18■□□□□ 0.98
CSNK1D-201ENST00000269361 Q3C1V9 767 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms