RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ERO1BQ86YB8 467 aa15.21■□□□□ 0.03
SS18-202ENST00000269138 DSCC1Q9BVC3 393 aa15.21■□□□□ 0.03
SS18-202ENST00000269138 PICK1Q9NRD5 415 aa15.21■□□□□ 0.03
SS18-202ENST00000269138 SWAP70Q9UH65 585 aa15.21■□□□□ 0.03
SS18-202ENST00000269138 CEP350Q5VT06 3117 aa15.2■□□□□ 0.02
SS18-202ENST00000269138 GH2P01242 217 aa15.2■□□□□ 0.02
SS18-202ENST00000269138 HAND2P61296 217 aa15.2■□□□□ 0.02
SS18-202ENST00000269138 NOGQ13253 232 aa15.2■□□□□ 0.02
SS18-202ENST00000269138 ZHX2Q9Y6X8 837 aa15.2■□□□□ 0.02
SS18-202ENST00000269138 ROBO3Q96MS0 1386 aa15.2■□□□□ 0.02
SS18-202ENST00000269138 IRF6O14896 467 aa15.19■□□□□ 0.02
SS18-202ENST00000269138 PRDM1O75626 825 aa15.19■□□□□ 0.02
SS18-202ENST00000269138 AKR1B1P15121 316 aa15.19■□□□□ 0.02
SS18-202ENST00000269138 GUCY1A2P33402 732 aa15.19■□□□□ 0.02
SS18-202ENST00000269138 ABCB5Q2M3G0 1257 aa15.19■□□□□ 0.02
SS18-202ENST00000269138 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
SS18-202ENST00000269138 ZBTB21Q9ULJ3 1066 aa15.19■□□□□ 0.02
SS18-202ENST00000269138 ZMYM6O95789 1325 aa15.19■□□□□ 0.02
SS18-202ENST00000269138 ZBTB48P10074 688 aaPredicted RBP15.18■□□□□ 0.02
SS18-202ENST00000269138 RASA1P20936 1047 aa15.18■□□□□ 0.02
SS18-202ENST00000269138 PPATQ06203 517 aa15.18■□□□□ 0.02
SS18-202ENST00000269138 PPIL2Q13356 520 aa15.18■□□□□ 0.02
SS18-202ENST00000269138 MKNK2Q9HBH9 465 aa15.18■□□□□ 0.02
SS18-202ENST00000269138 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
SS18-202ENST00000269138 MPHOSPH10O00566 681 aaKnown RBP15.17■□□□□ 0.02
SS18-202ENST00000269138 ASNSP08243 561 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 MAP2K2P36507 400 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 SEPT2Q15019 361 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 TBC1D10CQ8IV04 446 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 LSG1Q9H089 658 aaKnown RBP15.17■□□□□ 0.02
SS18-202ENST00000269138 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
SS18-202ENST00000269138 AFG3L2Q9Y4W6 797 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 USP17L5A8MUK1 530 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 RAB3GAP1Q15042 981 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 CASC1Q6TDU7 716 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 KIAA1211Q6ZU35 1233 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 CLEC10AQ8IUN9 316 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 MAP4K1Q92918 833 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 CABP5Q9NP86 173 aa15.17■□□□□ 0.02
SS18-202ENST00000269138 TRIM75PA6NK02 468 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 ZNF213O14771 459 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 SLC3A2P08195 630 aaKnown RBP15.16■□□□□ 0.02
SS18-202ENST00000269138 PDE4BQ07343 736 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 SPP2Q13103 211 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 FAM47AQ5JRC9 791 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 JMYQ8N9B5 988 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 NKX2-3Q8TAU0 364 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 CCDC17Q96LX7 622 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.16■□□□□ 0.02
SS18-202ENST00000269138 ANO2Q9NQ90 1003 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 GINM1Q9NU53 330 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 CTNNA3Q9UI47 895 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 KCNH4Q9UQ05 1017 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
SS18-202ENST00000269138 MANSC4A6NHS7 340 aaPredicted RBP15.15■□□□□ 0.02
SS18-202ENST00000269138 FGRP09769 529 aa15.15■□□□□ 0.02
SS18-202ENST00000269138 GTF2A2P52657 109 aa15.15■□□□□ 0.02
SS18-202ENST00000269138 ZNF444Q8N0Y2 327 aaPredicted RBP15.15■□□□□ 0.02
SS18-202ENST00000269138 ZNF280CQ8ND82 737 aa15.15■□□□□ 0.02
SS18-202ENST00000269138 ACER1Q8TDN7 264 aa15.15■□□□□ 0.02
SS18-202ENST00000269138 BRI3BPQ8WY22 251 aa15.15■□□□□ 0.02
SS18-202ENST00000269138 PTPN18Q99952 460 aa15.15■□□□□ 0.02
SS18-202ENST00000269138 RBM8AQ9Y5S9 174 aaKnown RBP15.15■□□□□ 0.02
SS18-202ENST00000269138 TAF6LQ9Y6J9 622 aa15.15■□□□□ 0.02
SS18-202ENST00000269138 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
SS18-202ENST00000269138 LAMB1P07942 1786 aa15.15■□□□□ 0.02
SS18-202ENST00000269138 CCL15-CCL14A0A0B4J2E2 113 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 CXCL11O14625 94 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 TM4SF4P48230 202 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 SNAPC2Q13487 334 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 DGKZQ13574 1117 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 MOGSQ13724 837 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 CCL15Q16663 113 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 IMMTQ16891 758 aaKnown RBP15.14■□□□□ 0.01
SS18-202ENST00000269138 RRP12Q5JTH9 1297 aaKnown RBP15.14■□□□□ 0.01
SS18-202ENST00000269138 AKNAD1Q5T1N1 836 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 SIAH1Q8IUQ4 282 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 WDR18Q9BV38 432 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 ZNF287Q9HBT7 754 aa15.14■□□□□ 0.01
SS18-202ENST00000269138 TESPA1A2RU30 521 aaPredicted RBP15.13■□□□□ 0.01
SS18-202ENST00000269138 IGF2BP3O00425 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
SS18-202ENST00000269138 ORC4O43929 436 aa15.13■□□□□ 0.01
SS18-202ENST00000269138 CYP21A2P08686 494 aa15.13■□□□□ 0.01
SS18-202ENST00000269138 TFAP4Q01664 338 aa15.13■□□□□ 0.01
SS18-202ENST00000269138 STAG1Q8WVM7 1258 aa15.13■□□□□ 0.01
SS18-202ENST00000269138 AS3MTQ9HBK9 375 aa15.13■□□□□ 0.01
SS18-202ENST00000269138 TOMM22Q9NS69 142 aa15.13■□□□□ 0.01
SS18-202ENST00000269138 ATAD5Q96QE3 1844 aa15.13■□□□□ 0.01
SS18-202ENST00000269138 THSD7BQ9C0I4 1608 aa15.13■□□□□ 0.01
SS18-202ENST00000269138 NEDD4P46934 1319 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 A0A0G2JLL6 359 aaPredicted RBP15.12■□□□□ 0.01
SS18-202ENST00000269138 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 RANBP6O60518 1105 aaKnown RBP15.12■□□□□ 0.01
SS18-202ENST00000269138 CETPP11597 493 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 SREBF2Q12772 1141 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 MTMR2Q13614 643 aa15.12■□□□□ 0.01
SS18-202ENST00000269138 MFSD6Q6ZSS7 791 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms