RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 SAFBQ15424 915 aaKnown RBP eCLIP14.87□□□□□ -0.03
CPSF6-201ENST00000266679 CAVIN4Q5BKX8 364 aa14.87□□□□□ -0.03
CPSF6-201ENST00000266679 TRAPPC3LQ5T215 181 aa14.87□□□□□ -0.03
CPSF6-201ENST00000266679 RESP18Q5W5W9 173 aa14.87□□□□□ -0.03
CPSF6-201ENST00000266679 NBPF11Q86T75 865 aa14.87□□□□□ -0.03
CPSF6-201ENST00000266679 NOSTRINQ8IVI9 506 aa14.87□□□□□ -0.03
CPSF6-201ENST00000266679 DIS3L2Q8IYB7 885 aaKnown RBP14.87□□□□□ -0.03
CPSF6-201ENST00000266679 BPIFA3Q9BQP9 254 aa14.87□□□□□ -0.03
CPSF6-201ENST00000266679 BSDC1Q9NW68 430 aaPredicted RBP14.87□□□□□ -0.03
CPSF6-201ENST00000266679 SRP68Q9UHB9 627 aaKnown RBP14.87□□□□□ -0.03
CPSF6-201ENST00000266679 MINPP1Q9UNW1 487 aa14.87□□□□□ -0.03
CPSF6-201ENST00000266679 TNKSO95271 1327 aa14.87□□□□□ -0.03
CPSF6-201ENST00000266679 KIF13BQ9NQT8 1826 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 CYP2D7A0A087X1C5 515 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 CUTAO60888 179 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 KLRK1P26718 216 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 C16orf45Q96MC5 204 aaPredicted RBP14.86□□□□□ -0.03
CPSF6-201ENST00000266679 DLEC1Q9Y238 1755 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 LAMB1P07942 1786 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 SMC2O95347 1197 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 HMGB2P26583 209 aaKnown RBP14.86□□□□□ -0.03
CPSF6-201ENST00000266679 LRRC8AQ8IWT6 810 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 ESR2Q92731 530 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 TIGD1Q96MW7 591 aa14.86□□□□□ -0.03
CPSF6-201ENST00000266679 RIOK1Q9BRS2 568 aaKnown RBP14.86□□□□□ -0.03
CPSF6-201ENST00000266679 RPS6KA4O75676 772 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 DEXIO95424 95 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 PNOCQ13519 176 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 RC3H1Q5TC82 1133 aaKnown RBP14.85□□□□□ -0.03
CPSF6-201ENST00000266679 CRACR2BQ8N4Y2 399 aaPredicted RBP14.85□□□□□ -0.03
CPSF6-201ENST00000266679 FANCBQ8NB91 859 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 ZNF784Q8NCA9 323 aaPredicted RBP14.85□□□□□ -0.03
CPSF6-201ENST00000266679 BCL2L12Q9HB09 334 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 ANAPC4Q9UJX5 808 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 RIOK3O14730 519 aaKnown RBP14.85□□□□□ -0.03
CPSF6-201ENST00000266679 GYS1P13807 737 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 RFC4P35249 363 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 SEC23AQ15436 765 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 TMTC2Q8N394 836 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 CCDC24Q8N4L8 307 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 FAM84BQ96KN1 310 aaPredicted RBP14.85□□□□□ -0.03
CPSF6-201ENST00000266679 MTA3Q9BTC8 594 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 PDCL3Q9H2J4 239 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 IFNKQ9P0W0 207 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 CD2APQ9Y5K6 639 aa14.85□□□□□ -0.03
CPSF6-201ENST00000266679 MAST2Q6P0Q8 1798 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 CCDC196A0A1B0GTZ2 297 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 GTF2F1P35269 517 aaKnown RBP eCLIP14.84□□□□□ -0.03
CPSF6-201ENST00000266679 TOB1P50616 345 aaPredicted RBP14.84□□□□□ -0.03
CPSF6-201ENST00000266679 TPM4P67936 248 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 NR5A1Q13285 461 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 TPD52L1Q16890 204 aaPredicted RBP14.84□□□□□ -0.03
CPSF6-201ENST00000266679 SPECC1Q5M775 1068 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 KRI1Q8N9T8 703 aaKnown RBP14.84□□□□□ -0.03
CPSF6-201ENST00000266679 ZNF384Q8TF68 577 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 FAM237AA0A1B0GTK4 181 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 PRDM1O75626 825 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 XPO4Q9C0E2 1151 aaKnown RBP14.84□□□□□ -0.03
CPSF6-201ENST00000266679 TUBE1Q9UJT0 475 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 KCNH3Q9ULD8 1083 aa14.84□□□□□ -0.03
CPSF6-201ENST00000266679 SMTNL1A8MU46 457 aa14.83□□□□□ -0.04
CPSF6-201ENST00000266679 NEMFO60524 1076 aa14.83□□□□□ -0.04
CPSF6-201ENST00000266679 GRIN1Q05586 938 aa14.83□□□□□ -0.04
CPSF6-201ENST00000266679 NCAPHQ15003 741 aa14.83□□□□□ -0.04
CPSF6-201ENST00000266679 LONRF3Q496Y0 759 aa14.83□□□□□ -0.04
CPSF6-201ENST00000266679 METTL16Q86W50 562 aaKnown RBP14.83□□□□□ -0.04
CPSF6-201ENST00000266679 ENAHQ8N8S7 591 aaPredicted RBP14.83□□□□□ -0.04
CPSF6-201ENST00000266679 OXER1Q8TDS5 423 aa14.83□□□□□ -0.04
CPSF6-201ENST00000266679 FOXP1Q9H334 677 aaPredicted RBP14.83□□□□□ -0.04
CPSF6-201ENST00000266679 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.83□□□□□ -0.04
CPSF6-201ENST00000266679 SKILP12757 684 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 ATP2B1P20020 1258 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 RCAN1P53805 252 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 CCZ1BP86790 482 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 CCZ1P86791 482 aaPredicted RBP14.82□□□□□ -0.04
CPSF6-201ENST00000266679 KRBA2Q6ZNG9 492 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 TMC6Q7Z403 805 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 CNNM3Q8NE01 707 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 ZSCAN10Q96SZ4 725 aaPredicted RBP14.82□□□□□ -0.04
CPSF6-201ENST00000266679 BRIP1Q9BX63 1249 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 CCDC88AQ3V6T2 1871 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 TNNT1P13805 278 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 LMOD1P29536 600 aaPredicted RBP14.82□□□□□ -0.04
CPSF6-201ENST00000266679 AKAP17AQ02040 695 aaKnown RBP14.82□□□□□ -0.04
CPSF6-201ENST00000266679 EVX2Q03828 476 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 SLC10A5Q5PT55 438 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 FBXO33Q7Z6M2 555 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 NBPF5PQ86XG9 351 aaPredicted RBP14.82□□□□□ -0.04
CPSF6-201ENST00000266679 NYXQ9GZU5 481 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 FBXO2Q9UK22 296 aaPredicted RBP14.82□□□□□ -0.04
CPSF6-201ENST00000266679 PCDHB6Q9Y5E3 794 aa14.82□□□□□ -0.04
CPSF6-201ENST00000266679 BRCA1P38398 1863 aaKnown RBP14.82□□□□□ -0.04
CPSF6-201ENST00000266679 TNRC6CQ9HCJ0 1690 aaKnown RBP14.81□□□□□ -0.04
CPSF6-201ENST00000266679 hCG_1642624A0A1W2PR95 340 aa14.81□□□□□ -0.04
CPSF6-201ENST00000266679 USP27XA6NNY8 438 aa14.81□□□□□ -0.04
CPSF6-201ENST00000266679 ADRA2BP18089 450 aa14.81□□□□□ -0.04
CPSF6-201ENST00000266679 IFIT1BQ5T764 474 aaKnown RBP14.81□□□□□ -0.04
CPSF6-201ENST00000266679 CTR9Q6PD62 1173 aa14.81□□□□□ -0.04
CPSF6-201ENST00000266679 SHISA4Q96DD7 197 aa14.81□□□□□ -0.04
CPSF6-201ENST00000266679 MAP7D2Q96T17 732 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms