RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SHROOM1Q2M3G4 852 aaPredicted RBP19.44■□□□□ 0.7
USE1-201ENST00000263897 SLFNL1Q499Z3 407 aa19.44■□□□□ 0.7
USE1-201ENST00000263897 LCORLQ8N3X6 602 aa19.44■□□□□ 0.7
USE1-201ENST00000263897 ZBTB21Q9ULJ3 1066 aa19.44■□□□□ 0.7
USE1-201ENST00000263897 C19orf81C9J6K1 198 aa19.43■□□□□ 0.7
USE1-201ENST00000263897 POLR3DP05423 398 aaPredicted RBP19.43■□□□□ 0.7
USE1-201ENST00000263897 PABPC4Q13310 644 aaKnown RBP eCLIP19.43■□□□□ 0.7
USE1-201ENST00000263897 UBE3CQ15386 1083 aa19.43■□□□□ 0.7
USE1-201ENST00000263897 NBPF11Q86T75 865 aa19.43■□□□□ 0.7
USE1-201ENST00000263897 SMCR8Q8TEV9 937 aaPredicted RBP19.43■□□□□ 0.7
USE1-201ENST00000263897 ARMT1Q9H993 441 aa19.43■□□□□ 0.7
USE1-201ENST00000263897 SRRDQ9UH36 339 aa19.43■□□□□ 0.7
USE1-201ENST00000263897 PNMA3Q9UL41 463 aa19.43■□□□□ 0.7
USE1-201ENST00000263897 PDE4DIPQ5VU43 2346 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 USP17L10C9JJH3 530 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 GH2P01242 217 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 OSBPP22059 807 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 MTMR2Q13614 643 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 CERKLQ49MI3 558 aaPredicted RBP19.42■□□□□ 0.7
USE1-201ENST00000263897 SLC9C1Q4G0N8 1177 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 SDR42E1Q8WUS8 393 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 ZNF333Q96JL9 665 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 CRBNQ96SW2 442 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 DCP1AQ9NPI6 582 aaPredicted RBP19.42■□□□□ 0.7
USE1-201ENST00000263897 MCM9Q9NXL9 1143 aa19.42■□□□□ 0.7
USE1-201ENST00000263897 FCGRTP55899 365 aa19.41■□□□□ 0.7
USE1-201ENST00000263897 ZSCAN25Q6NSZ9 544 aa19.41■□□□□ 0.7
USE1-201ENST00000263897 TMOD4Q9NZQ9 345 aa19.41■□□□□ 0.7
USE1-201ENST00000263897 LOC285556D6RIA3 1793 aa19.4■□□□□ 0.7
USE1-201ENST00000263897 PRKAB2O43741 272 aa19.4■□□□□ 0.7
USE1-201ENST00000263897 MBD4O95243 580 aa19.4■□□□□ 0.7
USE1-201ENST00000263897 CHGBP05060 677 aa19.4■□□□□ 0.7
USE1-201ENST00000263897 SHMT1P34896 483 aa19.4■□□□□ 0.7
USE1-201ENST00000263897 GABPAQ06546 454 aa19.4■□□□□ 0.7
USE1-201ENST00000263897 ANKRD13CQ8N6S4 541 aa19.4■□□□□ 0.7
USE1-201ENST00000263897 GPATCH3Q96I76 525 aa19.4■□□□□ 0.7
USE1-201ENST00000263897 ASCC2Q9H1I8 757 aaPredicted RBP19.4■□□□□ 0.7
USE1-201ENST00000263897 ATP8A2Q9NTI2 1148 aa19.4■□□□□ 0.7
USE1-201ENST00000263897 POTEFA5A3E0 1075 aa19.39■□□□□ 0.69
USE1-201ENST00000263897 HOXA7P31268 230 aaPredicted RBP19.39■□□□□ 0.69
USE1-201ENST00000263897 GCLCP48506 637 aaPredicted RBP19.39■□□□□ 0.69
USE1-201ENST00000263897 ABCB5Q2M3G0 1257 aa19.39■□□□□ 0.69
USE1-201ENST00000263897 CABP5Q9NP86 173 aa19.39■□□□□ 0.69
USE1-201ENST00000263897 MGAMO43451 1857 aa19.39■□□□□ 0.69
USE1-201ENST00000263897 MYH7P12883 1935 aa19.39■□□□□ 0.69
USE1-201ENST00000263897 EVX2Q03828 476 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 FAM110CQ1W6H9 321 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 USP17L2Q6R6M4 530 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 MYPNQ86TC9 1320 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 KBTBD3Q8NAB2 608 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 RAET1EQ8TD07 263 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 SH3TC2Q8TF17 1288 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 TMEM106CQ9BVX2 250 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 PUS7LQ9H0K6 701 aaKnown RBP19.38■□□□□ 0.69
USE1-201ENST00000263897 EMILIN3Q9NT22 766 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 HTTP42858 3142 aa19.38■□□□□ 0.69
USE1-201ENST00000263897 DOCK3Q8IZD9 2030 aa19.37■□□□□ 0.69
USE1-201ENST00000263897 CYP2D6P10635 497 aa19.37■□□□□ 0.69
USE1-201ENST00000263897 RAB3GAP1Q15042 981 aa19.37■□□□□ 0.69
USE1-201ENST00000263897 TSHZ3Q63HK5 1081 aa19.37■□□□□ 0.69
USE1-201ENST00000263897 P2RX7Q99572 595 aaKnown RBP19.37■□□□□ 0.69
USE1-201ENST00000263897 TAOK2Q9UL54 1235 aa19.37■□□□□ 0.69
USE1-201ENST00000263897 GABRQQ9UN88 632 aa19.37■□□□□ 0.69
USE1-201ENST00000263897 NAV1Q8NEY1 1877 aa19.37■□□□□ 0.69
USE1-201ENST00000263897 DDX60LQ5H9U9 1706 aaKnown RBP19.37■□□□□ 0.69
USE1-201ENST00000263897 TTC41PQ6P2S7 1318 aa19.36■□□□□ 0.69
USE1-201ENST00000263897 GRK4P32298 578 aa19.36■□□□□ 0.69
USE1-201ENST00000263897 IRX3P78415 501 aaPredicted RBP19.36■□□□□ 0.69
USE1-201ENST00000263897 PRKCZQ05513 592 aa19.36■□□□□ 0.69
USE1-201ENST00000263897 SLC4A4Q9Y6R1 1079 aa19.36■□□□□ 0.69
USE1-201ENST00000263897 USP17L12C9JPN9 530 aa19.35■□□□□ 0.69
USE1-201ENST00000263897 USP17L21D6R901 530 aa19.35■□□□□ 0.69
USE1-201ENST00000263897 TNPO2O14787 897 aaKnown RBP19.35■□□□□ 0.69
USE1-201ENST00000263897 EN2P19622 333 aaPredicted RBP19.35■□□□□ 0.69
USE1-201ENST00000263897 GUCY1A2P33402 732 aa19.35■□□□□ 0.69
USE1-201ENST00000263897 C12orf60Q5U649 245 aa19.35■□□□□ 0.69
USE1-201ENST00000263897 KIAA1683Q9H0B3 1180 aa19.35■□□□□ 0.69
USE1-201ENST00000263897 MORF4L1Q9UBU8 362 aa19.35■□□□□ 0.69
USE1-201ENST00000263897 SWAP70Q9UH65 585 aa19.35■□□□□ 0.69
USE1-201ENST00000263897 BAZ2AQ9UIF9 1905 aaKnown RBP19.35■□□□□ 0.69
USE1-201ENST00000263897 ERC2O15083 957 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 RNF113AO15541 343 aaKnown RBP19.34■□□□□ 0.69
USE1-201ENST00000263897 MYCP01106 439 aaPredicted RBP19.34■□□□□ 0.69
USE1-201ENST00000263897 FLT3LGP49771 235 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 USP14P54578 494 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 AAMPQ13685 434 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 SEPT2Q15019 361 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 SLC44A5Q8NCS7 719 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 ACER1Q8TDN7 264 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 OTUD7AQ8TE49 926 aaPredicted RBP19.34■□□□□ 0.69
USE1-201ENST00000263897 COA7Q96BR5 231 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 DYNLL2Q96FJ2 89 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 DDRGK1Q96HY6 314 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 C12orf42Q96LP6 360 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 STRBPQ96SI9 672 aaKnown RBP19.34■□□□□ 0.69
USE1-201ENST00000263897 FEZ1Q99689 392 aa19.34■□□□□ 0.69
USE1-201ENST00000263897 TNRC18O15417 2968 aaPredicted RBP19.34■□□□□ 0.69
USE1-201ENST00000263897 RBBP6Q7Z6E9 1792 aaKnown RBP19.34■□□□□ 0.69
USE1-201ENST00000263897 CYP2D7A0A087X1C5 515 aa19.33■□□□□ 0.68
USE1-201ENST00000263897 ZFYP08048 801 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms