RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SLC16A10Q8TF71 515 aa18.38■□□□□ 0.53
VPS26A-201ENST00000263559 USP28Q96RU2 1077 aa18.38■□□□□ 0.53
VPS26A-201ENST00000263559 SNED1Q8TER0 1413 aa18.38■□□□□ 0.53
VPS26A-201ENST00000263559 KIF28PB7ZC32 967 aa18.37■□□□□ 0.53
VPS26A-201ENST00000263559 C21orf2O43822 256 aa18.37■□□□□ 0.53
VPS26A-201ENST00000263559 ECE2O60344 883 aa18.37■□□□□ 0.53
VPS26A-201ENST00000263559 GUCY1A2P33402 732 aa18.37■□□□□ 0.53
VPS26A-201ENST00000263559 ZNF396Q96N95 335 aaPredicted RBP18.37■□□□□ 0.53
VPS26A-201ENST00000263559 ADAMTSL1Q8N6G6 1762 aa18.37■□□□□ 0.53
VPS26A-201ENST00000263559 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
VPS26A-201ENST00000263559 ATL3Q6DD88 541 aa18.37■□□□□ 0.53
VPS26A-201ENST00000263559 PGBD1Q96JS3 809 aa18.37■□□□□ 0.53
VPS26A-201ENST00000263559 IL17RBQ9NRM6 502 aa18.37■□□□□ 0.53
VPS26A-201ENST00000263559 MYH6P13533 1939 aa18.37■□□□□ 0.53
VPS26A-201ENST00000263559 AOC3Q16853 763 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 CC2D2BQ6DHV5 1058 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 RCSD1Q6JBY9 416 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 LRSAM1Q6UWE0 723 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 TRIM22Q8IYM9 498 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 RCOR1Q9UKL0 485 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 GOLGA6L4A6NEF3 574 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 CALM1P0DP23 149 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 CALM2P0DP24 149 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 CALM3P0DP25 149 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 NT5C2P49902 561 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 CCDC183Q5T5S1 534 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 STRIP1Q5VSL9 837 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 HHIPL2Q6UWX4 724 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 ZNF444Q8N0Y2 327 aaPredicted RBP18.36■□□□□ 0.53
VPS26A-201ENST00000263559 WASF1Q92558 559 aa18.36■□□□□ 0.53
VPS26A-201ENST00000263559 ZNF646O15015 1829 aaPredicted RBP18.35■□□□□ 0.53
VPS26A-201ENST00000263559 DDAH1O94760 285 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 PICALMQ13492 652 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 C16orf86Q6ZW13 317 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 BRAPQ7Z569 592 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 DEXIO95424 95 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 RASA1P20936 1047 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 CDK8P49336 464 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 KIAA2012Q0VF49 1180 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 TRIM29Q14134 588 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 DACT2Q5SW24 774 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 TEKT1Q969V4 418 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 USP40Q9NVE5 1235 aa18.35■□□□□ 0.53
VPS26A-201ENST00000263559 USP17L3A6NCW0 530 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 USP17L4A6NCW7 530 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 TSPY3P0CV98 308 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 TSPY8P0CW00 308 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 LIG1P18858 919 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 KCNA3P22001 575 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 MYSM1Q5VVJ2 828 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 USP17L1Q7RTZ2 530 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 PANK2Q9BZ23 570 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 RBM28Q9NW13 759 aaKnown RBP18.34■□□□□ 0.53
VPS26A-201ENST00000263559 WDHD1O75717 1129 aaPredicted RBP18.34■□□□□ 0.53
VPS26A-201ENST00000263559 PLEKHA8P1O95397 391 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 FUT2Q10981 343 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 APOBEC3HQ6NTF7 200 aaKnown RBP18.34■□□□□ 0.53
VPS26A-201ENST00000263559 DGKHQ86XP1 1220 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 KIAA0825Q8IV33 1275 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 ZNF287Q9HBT7 754 aa18.34■□□□□ 0.53
VPS26A-201ENST00000263559 DDX4Q9NQI0 724 aaKnown RBP18.34■□□□□ 0.53
VPS26A-201ENST00000263559 DPEP1P16444 411 aa18.33■□□□□ 0.53
VPS26A-201ENST00000263559 FKBP1AP62942 108 aaKnown RBP18.33■□□□□ 0.53
VPS26A-201ENST00000263559 SUPT20HQ8NEM7 779 aa18.33■□□□□ 0.53
VPS26A-201ENST00000263559 RNF26Q9BY78 433 aaPredicted RBP18.33■□□□□ 0.53
VPS26A-201ENST00000263559 CRKP46108 304 aa18.33■□□□□ 0.52
VPS26A-201ENST00000263559 CDC42EP5Q6NZY7 148 aa18.33■□□□□ 0.52
VPS26A-201ENST00000263559 ANKS1AQ92625 1134 aa18.33■□□□□ 0.52
VPS26A-201ENST00000263559 TCP11L1Q9NUJ3 509 aa18.33■□□□□ 0.52
VPS26A-201ENST00000263559 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.52
VPS26A-201ENST00000263559 GOLGB1Q14789 3259 aaKnown RBP18.33■□□□□ 0.52
VPS26A-201ENST00000263559 KAT14Q9H8E8 782 aa18.32■□□□□ 0.52
VPS26A-201ENST00000263559 CLIC4Q9Y696 253 aa18.32■□□□□ 0.52
VPS26A-201ENST00000263559 PPIP5K2O43314 1243 aa18.32■□□□□ 0.52
VPS26A-201ENST00000263559 CTCFLQ8NI51 663 aaPredicted RBP18.32■□□□□ 0.52
VPS26A-201ENST00000263559 RBSNQ9H1K0 784 aa18.32■□□□□ 0.52
VPS26A-201ENST00000263559 U2AF2P26368 475 aaKnown RBP eCLIP18.31■□□□□ 0.52
VPS26A-201ENST00000263559 CCDC178Q5BJE1 867 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 TMTC3Q6ZXV5 915 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 CCDC125Q86Z20 511 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 KCNJ14Q9UNX9 436 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 KIF13BQ9NQT8 1826 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 PRPF3O43395 683 aaKnown RBP18.31■□□□□ 0.52
VPS26A-201ENST00000263559 ZBTB7AO95365 584 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 GNL2Q13823 731 aaKnown RBP18.31■□□□□ 0.52
VPS26A-201ENST00000263559 PKN1Q16512 942 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 BICD2Q8TD16 824 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 ZDHHC15Q96MV8 337 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.31■□□□□ 0.52
VPS26A-201ENST00000263559 MRIQ9BWK5 157 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 PCDHAC2Q9Y5I4 1007 aa18.31■□□□□ 0.52
VPS26A-201ENST00000263559 V9GY48 417 aaPredicted RBP18.31■□□□□ 0.52
VPS26A-201ENST00000263559 hCG_1642624A0A1W2PR95 340 aa18.3■□□□□ 0.52
VPS26A-201ENST00000263559 LETM1O95202 739 aaPredicted RBP18.3■□□□□ 0.52
VPS26A-201ENST00000263559 MMP1P03956 469 aa18.3■□□□□ 0.52
VPS26A-201ENST00000263559 AKAP17AQ02040 695 aaKnown RBP18.3■□□□□ 0.52
VPS26A-201ENST00000263559 CCDC93Q567U6 631 aa18.3■□□□□ 0.52
VPS26A-201ENST00000263559 SRBD1Q8N5C6 995 aaKnown RBP18.3■□□□□ 0.52
VPS26A-201ENST00000263559 LINC00301Q8NCQ3 95 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms