RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
NOTCH3-201ENST00000263388 FBLN1P23142 703 aa19.39■□□□□ 0.69
NOTCH3-201ENST00000263388 PPP2R5EQ16537 467 aa19.39■□□□□ 0.69
NOTCH3-201ENST00000263388 MBD4O95243 580 aa19.39■□□□□ 0.69
NOTCH3-201ENST00000263388 POLKQ9UBT6 870 aa19.39■□□□□ 0.69
NOTCH3-201ENST00000263388 RLBP1P12271 317 aa19.39■□□□□ 0.69
NOTCH3-201ENST00000263388 ZNF131P52739 623 aa19.39■□□□□ 0.69
NOTCH3-201ENST00000263388 DDB1Q16531 1140 aa19.39■□□□□ 0.69
NOTCH3-201ENST00000263388 CCDC89Q8N998 374 aa19.39■□□□□ 0.69
NOTCH3-201ENST00000263388 DAPK3O43293 454 aa19.38■□□□□ 0.69
NOTCH3-201ENST00000263388 ASIC3Q9UHC3 531 aa19.38■□□□□ 0.69
NOTCH3-201ENST00000263388 MTHFSDQ2M296 383 aaKnown RBP19.38■□□□□ 0.69
NOTCH3-201ENST00000263388 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
NOTCH3-201ENST00000263388 B4E1Z4 1266 aa19.38■□□□□ 0.69
NOTCH3-201ENST00000263388 APPBP2Q92624 585 aa19.38■□□□□ 0.69
NOTCH3-201ENST00000263388 CCDC125Q86Z20 511 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 BCAP29Q9UHQ4 241 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 NSFL1CQ9UNZ2 370 aaKnown RBP19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 A0A1W2PP64 1363 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 CLNS1AP54105 237 aaKnown RBP19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 IRX4P78413 519 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 CBX8Q9HC52 389 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 ELF2Q15723 593 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 PPP1R21Q6ZMI0 780 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 NCAPGQ9BPX3 1015 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 CCDC169A6NNP5 214 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 MGEA5O60502 916 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 RBSNQ9H1K0 784 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 VCX3AQ9NNX9 186 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 ARHGEF35A5YM69 484 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 PRR16Q569H4 304 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 TTC38Q5R3I4 469 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 ACSBG1Q96GR2 724 aa19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 MRPL44Q9H9J2 332 aaKnown RBP19.37■□□□□ 0.69
NOTCH3-201ENST00000263388 PIK3AP1Q6ZUJ8 805 aa19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 TEX11Q8IYF3 940 aa19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 RNF10Q8N5U6 811 aaKnown RBP19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 MAIP1Q8WWC4 291 aa19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 IFIH1Q9BYX4 1025 aaKnown RBP19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 PEX26Q7Z412 305 aa19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 EDC4Q6P2E9 1401 aaKnown RBP19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 JDP2Q8WYK2 163 aa19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 PICK1Q9NRD5 415 aa19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 HVCN1Q96D96 273 aa19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 DNM3Q9UQ16 869 aa19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 GPAA1O43292 621 aa19.36■□□□□ 0.69
NOTCH3-201ENST00000263388 GCNT3O95395 438 aa19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 TNNI3KQ59H18 835 aa19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 FPGT-TNNI3KV9GXZ4 949 aa19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 SUDS3Q9H7L9 328 aaPredicted RBP19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 CACYBPQ9HB71 228 aaKnown RBP19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 SFMBT2Q5VUG0 894 aa19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 DCUN1D2Q6PH85 259 aa19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 RBM17Q96I25 401 aaKnown RBP19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 TRIM6Q9C030 488 aaPredicted RBP19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 MAST3O60307 1309 aa19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 MYH10P35580 1976 aa19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 NELFBQ8WX92 580 aa19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 PPP1R12CQ9BZL4 782 aa19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 DDX21Q9NR30 783 aaKnown RBP eCLIP19.35■□□□□ 0.69
NOTCH3-201ENST00000263388 RPS6KA1Q15418 735 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 CCDC38Q502W7 563 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 HHATQ5VTY9 493 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 RNASE9P60153 205 aaKnown RBP19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 KDM3AQ9Y4C1 1321 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 ABCC10Q5T3U5 1492 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 GPCPD1Q9NPB8 672 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 MAPK8IP1Q9UQF2 711 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 ZBTB7BO15156 539 aaPredicted RBP19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 ERCC3P19447 782 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 CARD6Q9BX69 1037 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 KCNG1Q9UIX4 513 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 HOXB7P09629 217 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 SSH2Q76I76 1423 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 TRIM58Q8NG06 486 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 PLBD2Q8NHP8 589 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 CCDC51Q96ER9 411 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 CABS1Q96KC9 395 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 PARP3Q9Y6F1 533 aa19.34■□□□□ 0.69
NOTCH3-201ENST00000263388 ZBTB17Q13105 803 aa19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 VSIG1Q86XK7 387 aa19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 RNF34Q969K3 372 aa19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 TBC1D8O95759 1140 aa19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 MAP3K21Q5TCX8 1036 aa19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 RSPH3Q86UC2 560 aa19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 P3H4Q92791 437 aa19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 WWC3Q9ULE0 1092 aa19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 TCOF1Q13428 1488 aaKnown RBP19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 WHAMMP3Q1A5X7 153 aa19.33■□□□□ 0.69
NOTCH3-201ENST00000263388 GOLGA4Q13439 2230 aaKnown RBP19.33■□□□□ 0.68
NOTCH3-201ENST00000263388 CCDC105Q8IYK2 499 aa19.33■□□□□ 0.68
NOTCH3-201ENST00000263388 ZBTB9Q96C00 473 aa19.33■□□□□ 0.68
NOTCH3-201ENST00000263388 DDX27Q96GQ7 796 aaKnown RBP19.33■□□□□ 0.68
NOTCH3-201ENST00000263388 SAR1BQ9Y6B6 198 aa19.33■□□□□ 0.68
NOTCH3-201ENST00000263388 SP4Q02446 784 aa19.33■□□□□ 0.68
NOTCH3-201ENST00000263388 KRT25Q7Z3Z0 450 aa19.33■□□□□ 0.68
NOTCH3-201ENST00000263388 NFE2L3Q9Y4A8 694 aa19.33■□□□□ 0.68
NOTCH3-201ENST00000263388 RNMTO43148 476 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms