RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 CHST3Q7LGC8 479 aa28.8■■■□□ 2.2
SCN1B-201ENST00000262631 ESR2Q92731 530 aa28.8■■■□□ 2.2
SCN1B-201ENST00000262631 GDF11O95390 407 aa28.8■■■□□ 2.2
SCN1B-201ENST00000262631 TFAP4Q01664 338 aa28.8■■■□□ 2.2
SCN1B-201ENST00000262631 ZNF444Q8N0Y2 327 aaPredicted RBP28.8■■■□□ 2.2
SCN1B-201ENST00000262631 TM6SF1Q9BZW5 370 aa28.8■■■□□ 2.2
SCN1B-201ENST00000262631 ZNF408Q9H9D4 720 aa28.8■■■□□ 2.2
SCN1B-201ENST00000262631 USP2O75604 605 aaPredicted RBP28.79■■■□□ 2.2
SCN1B-201ENST00000262631 ANTXR2P58335 489 aa28.79■■■□□ 2.2
SCN1B-201ENST00000262631 KLRG1Q96E93 195 aa28.79■■■□□ 2.2
SCN1B-201ENST00000262631 TCEANC2Q96MN5 208 aa28.79■■■□□ 2.2
SCN1B-201ENST00000262631 ZNF341Q9BYN7 854 aa28.79■■■□□ 2.2
SCN1B-201ENST00000262631 ZSWIM6Q9HCJ5 1215 aa28.79■■■□□ 2.2
SCN1B-201ENST00000262631 PSMA5P28066 241 aa28.78■■■□□ 2.2
SCN1B-201ENST00000262631 NF2P35240 595 aa28.78■■■□□ 2.2
SCN1B-201ENST00000262631 MOB2Q70IA6 237 aa28.78■■■□□ 2.2
SCN1B-201ENST00000262631 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.78■■■□□ 2.2
SCN1B-201ENST00000262631 ZNF112Q9UJU3 913 aa28.78■■■□□ 2.2
SCN1B-201ENST00000262631 TSPY2A6NKD2 308 aa28.77■■■□□ 2.2
SCN1B-201ENST00000262631 TOMM70O94826 608 aa28.77■■■□□ 2.2
SCN1B-201ENST00000262631 INPP5BP32019 993 aa28.77■■■□□ 2.2
SCN1B-201ENST00000262631 BLOC1S2Q6QNY1 142 aa28.77■■■□□ 2.2
SCN1B-201ENST00000262631 WRNIP1Q96S55 665 aa28.77■■■□□ 2.2
SCN1B-201ENST00000262631 PPP1R12BO60237 982 aaPredicted RBP28.77■■■□□ 2.2
SCN1B-201ENST00000262631 NMT2O60551 498 aa28.77■■■□□ 2.2
SCN1B-201ENST00000262631 SMC1BQ8NDV3 1235 aa28.77■■■□□ 2.2
SCN1B-201ENST00000262631 ZKSCAN3Q9BRR0 538 aa28.77■■■□□ 2.2
SCN1B-201ENST00000262631 TSPY3P0CV98 308 aa28.76■■■□□ 2.19
SCN1B-201ENST00000262631 TSPY8P0CW00 308 aa28.76■■■□□ 2.19
SCN1B-201ENST00000262631 RPS6KB1P23443 525 aa28.76■■■□□ 2.19
SCN1B-201ENST00000262631 CAP2P40123 477 aa28.76■■■□□ 2.19
SCN1B-201ENST00000262631 EXOSC10Q01780 885 aaKnown RBP28.76■■■□□ 2.19
SCN1B-201ENST00000262631 RUFY3Q7L099 469 aa28.76■■■□□ 2.19
SCN1B-201ENST00000262631 DHX32Q7L7V1 743 aaKnown RBP28.76■■■□□ 2.19
SCN1B-201ENST00000262631 ZKSCAN4Q969J2 545 aaPredicted RBP28.76■■■□□ 2.19
SCN1B-201ENST00000262631 LRRC2Q9BYS8 371 aa28.76■■■□□ 2.19
SCN1B-201ENST00000262631 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.76■■■□□ 2.19
SCN1B-201ENST00000262631 MPHOSPH10O00566 681 aaKnown RBP28.75■■■□□ 2.19
SCN1B-201ENST00000262631 HMGB1P09429 215 aaKnown RBP28.75■■■□□ 2.19
SCN1B-201ENST00000262631 ABCB5Q2M3G0 1257 aa28.75■■■□□ 2.19
SCN1B-201ENST00000262631 RBM46Q8TBY0 533 aaKnown RBP28.75■■■□□ 2.19
SCN1B-201ENST00000262631 CCDC17Q96LX7 622 aa28.75■■■□□ 2.19
SCN1B-201ENST00000262631 IL17RBQ9NRM6 502 aa28.75■■■□□ 2.19
SCN1B-201ENST00000262631 ANGEL1Q9UNK9 670 aaKnown RBP28.75■■■□□ 2.19
SCN1B-201ENST00000262631 PRC1O43663 620 aa28.74■■■□□ 2.19
SCN1B-201ENST00000262631 CELF2O95319 508 aaKnown RBP28.74■■■□□ 2.19
SCN1B-201ENST00000262631 GH2P01242 217 aa28.74■■■□□ 2.19
SCN1B-201ENST00000262631 MCM5P33992 734 aa28.74■■■□□ 2.19
SCN1B-201ENST00000262631 CST9Q5W186 159 aa28.74■■■□□ 2.19
SCN1B-201ENST00000262631 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.74■■■□□ 2.19
SCN1B-201ENST00000262631 NEDD1Q8NHV4 660 aa28.74■■■□□ 2.19
SCN1B-201ENST00000262631 CYP46A1Q9Y6A2 500 aa28.74■■■□□ 2.19
SCN1B-201ENST00000262631 GUCY1A2P33402 732 aa28.74■■■□□ 2.19
SCN1B-201ENST00000262631 CLEC10AQ8IUN9 316 aa28.74■■■□□ 2.19
SCN1B-201ENST00000262631 GPHNQ9NQX3 736 aaPredicted RBP28.74■■■□□ 2.19
SCN1B-201ENST00000262631 PASKQ96RG2 1323 aa28.73■■■□□ 2.19
SCN1B-201ENST00000262631 TTLL12Q14166 644 aaPredicted RBP28.73■■■□□ 2.19
SCN1B-201ENST00000262631 ZBTB21Q9ULJ3 1066 aa28.73■■■□□ 2.19
SCN1B-201ENST00000262631 PLIN4Q96Q06 1357 aa28.72■■■□□ 2.19
SCN1B-201ENST00000262631 CTNND1O60716 968 aaKnown RBP28.72■■■□□ 2.19
SCN1B-201ENST00000262631 NEK4P51957 841 aa28.72■■■□□ 2.19
SCN1B-201ENST00000262631 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.72■■■□□ 2.19
SCN1B-201ENST00000262631 MYH8P13535 1937 aa28.72■■■□□ 2.19
SCN1B-201ENST00000262631 IGKV6D-41A0A0C4DH26 115 aa28.71■■■□□ 2.19
SCN1B-201ENST00000262631 NT5C2P49902 561 aa28.71■■■□□ 2.19
SCN1B-201ENST00000262631 SEPT2Q15019 361 aa28.71■■■□□ 2.19
SCN1B-201ENST00000262631 RABEP1Q15276 862 aa28.71■■■□□ 2.19
SCN1B-201ENST00000262631 MAP3K11Q16584 847 aa28.71■■■□□ 2.19
SCN1B-201ENST00000262631 CEP95Q96GE4 821 aa28.71■■■□□ 2.19
SCN1B-201ENST00000262631 IREB2P48200 963 aaKnown RBP28.7■■■□□ 2.19
SCN1B-201ENST00000262631 TMEM179Q6ZVK1 233 aa28.7■■■□□ 2.19
SCN1B-201ENST00000262631 CCDC84Q86UT8 332 aaPredicted RBP28.7■■■□□ 2.19
SCN1B-201ENST00000262631 IQCA1Q86XH1 822 aa28.7■■■□□ 2.19
SCN1B-201ENST00000262631 TTC14Q96N46 770 aa28.7■■■□□ 2.19
SCN1B-201ENST00000262631 ZSCAN10Q96SZ4 725 aaPredicted RBP28.7■■■□□ 2.19
SCN1B-201ENST00000262631 UBE2Q2LH0YL09 131 aa28.7■■■□□ 2.18
SCN1B-201ENST00000262631 RAB3GAP1Q15042 981 aa28.7■■■□□ 2.18
SCN1B-201ENST00000262631 IGDCC4Q8TDY8 1250 aa28.7■■■□□ 2.18
SCN1B-201ENST00000262631 UBAC1Q9BSL1 405 aa28.7■■■□□ 2.18
SCN1B-201ENST00000262631 SENP2Q9HC62 589 aa28.7■■■□□ 2.18
SCN1B-201ENST00000262631 GBA2Q9HCG7 927 aaPredicted RBP28.7■■■□□ 2.18
SCN1B-201ENST00000262631 TCP11L1Q9NUJ3 509 aa28.7■■■□□ 2.18
SCN1B-201ENST00000262631 TNKSO95271 1327 aa28.69■■■□□ 2.18
SCN1B-201ENST00000262631 MAP3K9P80192 1104 aa28.69■■■□□ 2.18
SCN1B-201ENST00000262631 VGLL4Q14135 290 aa28.69■■■□□ 2.18
SCN1B-201ENST00000262631 ENAHQ8N8S7 591 aaPredicted RBP28.69■■■□□ 2.18
SCN1B-201ENST00000262631 CABP5Q9NP86 173 aa28.69■■■□□ 2.18
SCN1B-201ENST00000262631 PDRG1Q9NUG6 133 aa28.69■■■□□ 2.18
SCN1B-201ENST00000262631 PAPPA2Q9BXP8 1791 aa28.69■■■□□ 2.18
SCN1B-201ENST00000262631 WDR19Q8NEZ3 1342 aa28.68■■■□□ 2.18
SCN1B-201ENST00000262631 GREB1LQ9C091 1923 aaPredicted RBP28.68■■■□□ 2.18
SCN1B-201ENST00000262631 IFIT3O14879 490 aaKnown RBP28.68■■■□□ 2.18
SCN1B-201ENST00000262631 SEC23AQ15436 765 aa28.68■■■□□ 2.18
SCN1B-201ENST00000262631 RCSD1Q6JBY9 416 aa28.68■■■□□ 2.18
SCN1B-201ENST00000262631 ARMC9Q7Z3E5 817 aa28.68■■■□□ 2.18
SCN1B-201ENST00000262631 SCYL3Q8IZE3 742 aa28.68■■■□□ 2.18
SCN1B-201ENST00000262631 CLMNQ96JQ2 1002 aa28.68■■■□□ 2.18
SCN1B-201ENST00000262631 MTMR4Q9NYA4 1195 aa28.68■■■□□ 2.18
SCN1B-201ENST00000262631 ASNSP08243 561 aa28.67■■■□□ 2.18
SCN1B-201ENST00000262631 TMEM67Q5HYA8 995 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms