RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 RBM28Q9NW13 759 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 ZNF500O60304 480 aaPredicted RBP14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 BBOX1O75936 387 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 UFL1O94874 794 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 BAG3O95817 575 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 AXDND1Q5T1B0 1012 aaPredicted RBP14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 NOSTRINQ8IVI9 506 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 FOXP1Q9H334 677 aaPredicted RBP14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 GGA1Q9UJY5 639 aa14.95□□□□□ -0.02
SPTLC1-201ENST00000262554 DDAH1O94760 285 aa14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 LDHCP07864 332 aa14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 XBP1P17861 261 aa14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 MARCKSP29966 332 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 USP5P45974 858 aa14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 NT5C2P49902 561 aa14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 DIS3L2Q8IYB7 885 aaKnown RBP14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 CMTR1Q8N1G2 835 aaKnown RBP14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 MAP3K14Q99558 947 aa14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 ANO10Q9NW15 660 aa14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 MCM9Q9NXL9 1143 aa14.94□□□□□ -0.02
SPTLC1-201ENST00000262554 AP5Z1O43299 807 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 PTPAQ15257 358 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 SLC51AQ86UW1 340 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 AMOTL1Q8IY63 956 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 NAV1Q8NEY1 1877 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 GOLGA6L6A8MZA4 724 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 BTBD18B2RXH4 712 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 POLRMTO00411 1230 aaKnown RBP14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 WDHD1O75717 1129 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 ZNF202O95125 648 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 CYP2D6P10635 497 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 PFKFB1P16118 471 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 HOXA10P31260 410 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 DDR1Q08345 913 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 TXNRD1Q16881 649 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 IFNLR1Q8IU57 520 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 CERS3Q8IU89 383 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 GPR101Q96P66 508 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 CRAMP1Q96RY5 1269 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 CD209Q9NNX6 404 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 KCNJ14Q9UNX9 436 aa14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
SPTLC1-201ENST00000262554 TSPY2A6NKD2 308 aa14.92□□□□□ -0.02
SPTLC1-201ENST00000262554 GOLGA6L19H0YKK7 550 aa14.92□□□□□ -0.02
SPTLC1-201ENST00000262554 PRPF3O43395 683 aaKnown RBP14.92□□□□□ -0.02
SPTLC1-201ENST00000262554 TPM3P06753 285 aa14.92□□□□□ -0.02
SPTLC1-201ENST00000262554 TROAPQ12815 778 aa14.92□□□□□ -0.02
SPTLC1-201ENST00000262554 ZRSR1Q15695 479 aaKnown RBP14.92□□□□□ -0.02
SPTLC1-201ENST00000262554 RILPL1Q5EBL4 403 aa14.92□□□□□ -0.02
SPTLC1-201ENST00000262554 TMC4Q7Z404 712 aa14.92□□□□□ -0.02
SPTLC1-201ENST00000262554 PODXL2Q9NZ53 605 aa14.92□□□□□ -0.02
SPTLC1-201ENST00000262554 MROH7-TTC4A0A0A0MT08 1334 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 CUTAO60888 179 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 USP17L8P0C7I0 530 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 IL1R1P14778 569 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 PPP4CP60510 307 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 EVX2Q03828 476 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 FAM47AQ5JRC9 791 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 C12orf60Q5U649 245 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 CTCFLQ8NI51 663 aaPredicted RBP14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 SH3RF3Q8TEJ3 882 aaPredicted RBP14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 NAT10Q9H0A0 1025 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 LRRC37AA6NMS7 1700 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 FUT2Q10981 343 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 DIXDC1Q155Q3 683 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 C11orf57Q6ZUT1 292 aaPredicted RBP14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 CEP57L1Q8IYX8 460 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 TIGD1Q96MW7 591 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 KIAA1468Q9P260 1216 aa14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 MKRN1Q9UHC7 482 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-201ENST00000262554 CDK5RAP2Q96SN8 1893 aa14.9□□□□□ -0.02
SPTLC1-201ENST00000262554 KLRG2A4D1S0 409 aaPredicted RBP14.9□□□□□ -0.02
SPTLC1-201ENST00000262554 PLEKHA8P1O95397 391 aa14.9□□□□□ -0.02
SPTLC1-201ENST00000262554 SYKP43405 635 aa14.9□□□□□ -0.02
SPTLC1-201ENST00000262554 KIAA2012Q0VF49 1180 aa14.9□□□□□ -0.02
SPTLC1-201ENST00000262554 IQCB1Q15051 598 aa14.9□□□□□ -0.02
SPTLC1-201ENST00000262554 TMTC3Q6ZXV5 915 aa14.9□□□□□ -0.02
SPTLC1-201ENST00000262554 KRI1Q8N9T8 703 aaKnown RBP14.9□□□□□ -0.02
SPTLC1-201ENST00000262554 TRIM5Q9C035 493 aa14.9□□□□□ -0.02
SPTLC1-201ENST00000262554 ROBO3Q96MS0 1386 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 BECN2A8MW95 431 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 NMT2O60551 498 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 GRIK5Q16478 980 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 PKN1Q16512 942 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 CCDC178Q5BJE1 867 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 RESP18Q5W5W9 173 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 SHC4Q6S5L8 630 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 SLF2Q8IX21 1173 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 MPNDQ8N594 471 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 TBC1D16Q8TBP0 767 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 CEP131Q9UPN4 1083 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 HPSEQ9Y251 543 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 V9GY48 417 aaPredicted RBP14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 FAM237AA0A1B0GTK4 181 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 C6orf229H3BNL8 230 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 PLCG2P16885 1265 aa14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 TOB1P50616 345 aaPredicted RBP14.89□□□□□ -0.03
SPTLC1-201ENST00000262554 TFAP4Q01664 338 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms