RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 EAF2Q96CJ1 260 aaPredicted RBP14.89□□□□□ -0.03
TRAF4-202ENST00000262396 CABP5Q9NP86 173 aa14.89□□□□□ -0.03
TRAF4-202ENST00000262396 GINM1Q9NU53 330 aa14.89□□□□□ -0.03
TRAF4-202ENST00000262396 ZSWIM8A7E2V4 1837 aa14.89□□□□□ -0.03
TRAF4-202ENST00000262396 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
TRAF4-202ENST00000262396 H0YGN5 161 aa14.88□□□□□ -0.03
TRAF4-202ENST00000262396 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-202ENST00000262396 ADGRA1Q86SQ6 560 aa14.88□□□□□ -0.03
TRAF4-202ENST00000262396 DEFB118Q96PH6 123 aa14.88□□□□□ -0.03
TRAF4-202ENST00000262396 WDR18Q9BV38 432 aa14.88□□□□□ -0.03
TRAF4-202ENST00000262396 IL1RAPL2Q9NP60 686 aa14.88□□□□□ -0.03
TRAF4-202ENST00000262396 ZBTB21Q9ULJ3 1066 aa14.88□□□□□ -0.03
TRAF4-202ENST00000262396 ZBED9Q6R2W3 1325 aa14.88□□□□□ -0.03
TRAF4-202ENST00000262396 SGPL1O95470 568 aa14.87□□□□□ -0.03
TRAF4-202ENST00000262396 RAB3GAP1Q15042 981 aa14.87□□□□□ -0.03
TRAF4-202ENST00000262396 ZYXQ15942 572 aaKnown RBP14.87□□□□□ -0.03
TRAF4-202ENST00000262396 SH3D19Q5HYK7 790 aa14.87□□□□□ -0.03
TRAF4-202ENST00000262396 USP17L2Q6R6M4 530 aa14.87□□□□□ -0.03
TRAF4-202ENST00000262396 GPRC5AQ8NFJ5 357 aa14.87□□□□□ -0.03
TRAF4-202ENST00000262396 DNAJC2Q99543 621 aaKnown RBP14.87□□□□□ -0.03
TRAF4-202ENST00000262396 PAGR1Q9BTK6 254 aa14.87□□□□□ -0.03
TRAF4-202ENST00000262396 NDUFB9Q9Y6M9 179 aa14.87□□□□□ -0.03
TRAF4-202ENST00000262396 RBBP6Q7Z6E9 1792 aaKnown RBP14.87□□□□□ -0.03
TRAF4-202ENST00000262396 HTTP42858 3142 aa14.86□□□□□ -0.03
TRAF4-202ENST00000262396 MAGEB6P1A0A0J9YX57 407 aa14.86□□□□□ -0.03
TRAF4-202ENST00000262396 GH2P01242 217 aa14.86□□□□□ -0.03
TRAF4-202ENST00000262396 CAPN2P17655 700 aa14.86□□□□□ -0.03
TRAF4-202ENST00000262396 RRP1BQ14684 758 aaKnown RBP14.86□□□□□ -0.03
TRAF4-202ENST00000262396 WDR78Q5VTH9 848 aa14.86□□□□□ -0.03
TRAF4-202ENST00000262396 TMED8Q6PL24 325 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-202ENST00000262396 GTF3C2Q8WUA4 911 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-202ENST00000262396 SHISA4Q96DD7 197 aa14.86□□□□□ -0.03
TRAF4-202ENST00000262396 CRNKL1Q9BZJ0 848 aaKnown RBP14.86□□□□□ -0.03
TRAF4-202ENST00000262396 SERPINB13Q9UIV8 391 aa14.86□□□□□ -0.03
TRAF4-202ENST00000262396 DDX19BQ9UMR2 479 aa14.86□□□□□ -0.03
TRAF4-202ENST00000262396 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-202ENST00000262396 MPHOSPH10O00566 681 aaKnown RBP14.85□□□□□ -0.03
TRAF4-202ENST00000262396 EVI5O60447 810 aa14.85□□□□□ -0.03
TRAF4-202ENST00000262396 HMGCRP04035 888 aa14.85□□□□□ -0.03
TRAF4-202ENST00000262396 CYP2B6P20813 491 aa14.85□□□□□ -0.03
TRAF4-202ENST00000262396 HERVK_113P62684 666 aa14.85□□□□□ -0.03
TRAF4-202ENST00000262396 CERKLQ49MI3 558 aaPredicted RBP14.85□□□□□ -0.03
TRAF4-202ENST00000262396 CHRDL2Q6WN34 429 aa14.85□□□□□ -0.03
TRAF4-202ENST00000262396 RHPN1Q8TCX5 695 aa14.85□□□□□ -0.03
TRAF4-202ENST00000262396 KIF1BPQ96EK5 621 aa14.85□□□□□ -0.03
TRAF4-202ENST00000262396 P2RX7Q99572 595 aaKnown RBP14.85□□□□□ -0.03
TRAF4-202ENST00000262396 NUDT12Q9BQG2 462 aa14.85□□□□□ -0.03
TRAF4-202ENST00000262396 HMX1Q9NP08 348 aaPredicted RBP14.85□□□□□ -0.03
TRAF4-202ENST00000262396 CENPFP49454 3210 aa14.85□□□□□ -0.03
TRAF4-202ENST00000262396 GLRX3O76003 335 aaKnown RBP14.84□□□□□ -0.03
TRAF4-202ENST00000262396 USP14P54578 494 aa14.84□□□□□ -0.03
TRAF4-202ENST00000262396 ABCB5Q2M3G0 1257 aa14.84□□□□□ -0.03
TRAF4-202ENST00000262396 SLC9C2Q5TAH2 1124 aa14.84□□□□□ -0.03
TRAF4-202ENST00000262396 RPAP2Q8IXW5 612 aaPredicted RBP14.84□□□□□ -0.03
TRAF4-202ENST00000262396 AMOTL1Q8IY63 956 aa14.84□□□□□ -0.03
TRAF4-202ENST00000262396 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
TRAF4-202ENST00000262396 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.84□□□□□ -0.039e-7■■■□□ 14.7
TRAF4-202ENST00000262396 ANTXR1Q9H6X2 564 aa14.84□□□□□ -0.03
TRAF4-202ENST00000262396 COG6Q9Y2V7 657 aa14.84□□□□□ -0.03
TRAF4-202ENST00000262396 GOLIM4O00461 696 aa14.83□□□□□ -0.04
TRAF4-202ENST00000262396 MAPK4P31152 587 aa14.83□□□□□ -0.04
TRAF4-202ENST00000262396 HOXA7P31268 230 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-202ENST00000262396 CCNA1P78396 465 aa14.83□□□□□ -0.04
TRAF4-202ENST00000262396 NECAB2Q7Z6G3 386 aa14.83□□□□□ -0.04
TRAF4-202ENST00000262396 SOCS4Q8WXH5 440 aa14.83□□□□□ -0.04
TRAF4-202ENST00000262396 DNAJC18Q9H819 358 aa14.83□□□□□ -0.04
TRAF4-202ENST00000262396 MCM9Q9NXL9 1143 aa14.83□□□□□ -0.04
TRAF4-202ENST00000262396 USP17L15C9J2P7 530 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 USP17L13C9JLJ4 530 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 USP17L11C9JVI0 530 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 USP17L18D6R9N7 530 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 USP17L22D6RA61 530 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 USP17L17D6RBQ6 530 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 USP17L19D6RCP7 530 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 USP17L20D6RJB6 530 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 RAB11FIP3O75154 756 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 ZKSCAN1P17029 563 aaPredicted RBP14.82□□□□□ -0.04
TRAF4-202ENST00000262396 USP17L24Q0WX57 530 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 TRMT44Q8IYL2 757 aaKnown RBP14.82□□□□□ -0.04
TRAF4-202ENST00000262396 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.82□□□□□ -0.042e-8■■□□□ 13.1
TRAF4-202ENST00000262396 MORF4L1Q9UBU8 362 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 MAST2Q6P0Q8 1798 aa14.82□□□□□ -0.04
TRAF4-202ENST00000262396 RGS2P41220 211 aa14.81□□□□□ -0.04
TRAF4-202ENST00000262396 ERVK-9P63128 1117 aa14.81□□□□□ -0.04
TRAF4-202ENST00000262396 ERVK-24P63145 666 aa14.81□□□□□ -0.04
TRAF4-202ENST00000262396 SHROOM1Q2M3G4 852 aaPredicted RBP14.81□□□□□ -0.04
TRAF4-202ENST00000262396 METTL16Q86W50 562 aaKnown RBP14.81□□□□□ -0.04
TRAF4-202ENST00000262396 PAWRQ96IZ0 340 aaKnown RBP14.81□□□□□ -0.04
TRAF4-202ENST00000262396 EHD4Q9H223 541 aa14.81□□□□□ -0.04
TRAF4-202ENST00000262396 IVNS1ABPQ9Y6Y0 642 aa14.81□□□□□ -0.04
TRAF4-202ENST00000262396 RPTORQ8N122 1335 aa14.81□□□□□ -0.04
TRAF4-202ENST00000262396 PDE6AP16499 860 aa14.8□□□□□ -0.04
TRAF4-202ENST00000262396 JAG1P78504 1218 aa14.8□□□□□ -0.04
TRAF4-202ENST00000262396 PLEKHH3Q7Z736 793 aa14.8□□□□□ -0.04
TRAF4-202ENST00000262396 BOLA2Q9H3K6 86 aa14.8□□□□□ -0.04
TRAF4-202ENST00000262396 EMILIN3Q9NT22 766 aa14.8□□□□□ -0.04
TRAF4-202ENST00000262396 RCAN3Q9UKA8 241 aa14.8□□□□□ -0.04
TRAF4-202ENST00000262396 ZNF532Q9HCE3 1301 aa14.8□□□□□ -0.04
TRAF4-202ENST00000262396 MGAMO43451 1857 aa14.79□□□□□ -0.04
TRAF4-202ENST00000262396 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms