RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SBNO1A3KN83 1393 aa17.94■□□□□ 0.46
PRPF40B-201ENST00000261897 ZAP70P43403 619 aa17.94■□□□□ 0.46
PRPF40B-201ENST00000261897 CTDSPL2Q05D32 466 aa17.94■□□□□ 0.46
PRPF40B-201ENST00000261897 HELBQ8NG08 1087 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-201ENST00000261897 CD248Q9HCU0 757 aa17.94■□□□□ 0.46
PRPF40B-201ENST00000261897 EXOC5O00471 708 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 ADORA1P30542 326 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 CTCFLQ8NI51 663 aaPredicted RBP17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 NAPBQ9H115 298 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 IQSEC3Q9UPP2 1182 aaPredicted RBP17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 EIF4E1BA6NMX2 242 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 PRDM1O75626 825 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 HNRNPH1P31943 449 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 PEX19P40855 299 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 IL17RAQ96F46 866 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 SELENOOQ9BVL4 669 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 GEMIN8Q9NWZ8 242 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 ANGEL1Q9UNK9 670 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 ATP1A1P05023 1023 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 BMP6P22004 513 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 GBP2P32456 591 aaPredicted RBP17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 SPA17Q15506 151 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 TRIM47Q96LD4 638 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 BPIFA3Q9BQP9 254 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 TANGO6Q9C0B7 1094 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 CSRNP2Q9H175 543 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 CNNM1Q9NRU3 951 aa17.93■□□□□ 0.46
PRPF40B-201ENST00000261897 RNMTO43148 476 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 WHAMMP3Q1A5X7 153 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 CYP26C1Q6V0L0 522 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 PUS7LQ9H0K6 701 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 SUFUQ9UMX1 484 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 CCDC172P0C7W6 258 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 ARID5AQ03989 594 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 ANKRD24Q8TF21 1146 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 EPN1Q9Y6I3 576 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 ARHGEF10O15013 1369 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 ESYT3A0FGR9 886 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 GOLGA6L10A6NI86 522 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 METTL24Q5JXM2 366 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 TOM1L2Q6ZVM7 507 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 SMCR8Q8TEV9 937 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 N4BP2L2Q92802 583 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 TBC1D31Q96DN5 1066 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 HELLSQ9NRZ9 838 aa17.92■□□□□ 0.46
PRPF40B-201ENST00000261897 E7EVH7 732 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 MAP2K7O14733 419 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 PSD3Q9NYI0 1048 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 MFAP3LO75121 409 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 TDRD12Q587J7 1177 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 KLHL34Q8N239 644 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 DSCC1Q9BVC3 393 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 USP42Q9H9J4 1324 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 GPTP24298 496 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 KCNJ6P48051 423 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 EXOSC10Q01780 885 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 RPAINQ86UA6 219 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 TMTC1Q8IUR5 882 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 HSD3B7Q9H2F3 369 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 VPS54Q9P1Q0 977 aa17.91■□□□□ 0.46
PRPF40B-201ENST00000261897 KRT86O43790 486 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 AKR1B10O60218 316 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 MTIF2P46199 727 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 IRAK1P51617 712 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 CLNS1AP54105 237 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 EHD2Q9NZN4 543 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 SMIM23A6NLE4 172 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 MCM3P25205 808 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 PAFAH1B1P43034 410 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 TAX1BP1Q86VP1 789 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 TMEM139Q8IV31 216 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 RRP36Q96EU6 259 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 ZNF496Q96IT1 587 aaPredicted RBP17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 KDRP35968 1356 aa17.9■□□□□ 0.46
PRPF40B-201ENST00000261897 FAM205CA6NFA0 338 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 GUCY1A2P33402 732 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 MCM7P33993 719 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 KIF5AQ12840 1032 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 NOSTRINQ8IVI9 506 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 PLCD1P51178 756 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 EZH2Q15910 746 aaKnown RBP17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 TSGA10IPQ3SY00 556 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 ZMYM1Q5SVZ6 1142 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 CFAP58Q5T655 872 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 CTAGE1Q96RT6 745 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 ATG3Q9NT62 314 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 TRIM75PA6NK02 468 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 SCP2P22307 547 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 GUCY1A3Q02108 690 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 FAM69CQ0P6D2 419 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 RTN1Q16799 776 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 CCDC113Q9H0I3 377 aa17.89■□□□□ 0.45
PRPF40B-201ENST00000261897 SEC24CP53992 1094 aa17.88■□□□□ 0.45
PRPF40B-201ENST00000261897 ENOX1Q8TC92 643 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms