RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 SV2BQ7L1I2 683 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 AOPEPQ8N6M6 819 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 ZC4H2Q9NQZ6 224 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.18□□□□□ -0.46
URB2-201ENST00000258243 V9GY48 417 aaPredicted RBP12.18□□□□□ -0.46
URB2-201ENST00000258243 TET3O43151 1660 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 CCNT1O60563 726 aaKnown RBP12.18□□□□□ -0.46
URB2-201ENST00000258243 CFBP00751 764 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 STRN3Q13033 797 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
URB2-201ENST00000258243 NLRX1Q86UT6 975 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 CCDC117Q8IWD4 279 aaPredicted RBP12.18□□□□□ -0.46
URB2-201ENST00000258243 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 PNMA2Q9UL42 364 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 AKNAD1Q5T1N1 836 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 TTLL6Q8N841 843 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 CCDC113Q9H0I3 377 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 GREM2Q9H772 168 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 SYNMO15061 1565 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 ATP5JP18859 108 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 UBASH3AP57075 661 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 IFFO1Q0D2I5 559 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 MCM6Q14566 821 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 ZNF174Q15697 407 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 PIGBQ92521 554 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 TRIM6Q9C030 488 aaPredicted RBP12.18□□□□□ -0.46
URB2-201ENST00000258243 CLASP1Q7Z460 1538 aa12.18□□□□□ -0.46
URB2-201ENST00000258243 CCDC169A6NNP5 214 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 ERVV-1B6SEH8 477 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 C17orf53Q8N3J3 647 aaPredicted RBP12.17□□□□□ -0.46
URB2-201ENST00000258243 PIM2Q9P1W9 311 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 ANAPC4Q9UJX5 808 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 ZMYM4Q5VZL5 1548 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
URB2-201ENST00000258243 SEMA3EO15041 775 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 U2AF2P26368 475 aaKnown RBP eCLIP12.17□□□□□ -0.46
URB2-201ENST00000258243 PLCD1P51178 756 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 FMNL3Q8IVF7 1028 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 TAOK3Q9H2K8 898 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 TNS3Q68CZ2 1445 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 SPATA31E1Q6ZUB1 1445 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 FERP16591 822 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 RPL13P26373 211 aaKnown RBP12.17□□□□□ -0.46
URB2-201ENST00000258243 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 KRT25Q7Z3Z0 450 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 RSPH14Q9UHP6 348 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 DDX39AO00148 427 aaKnown RBP12.17□□□□□ -0.46
URB2-201ENST00000258243 MMP10P09238 476 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 HARSP12081 509 aaKnown RBP12.17□□□□□ -0.46
URB2-201ENST00000258243 OSBPP22059 807 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 CNGA1P29973 690 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 PRPF4BQ13523 1007 aaKnown RBP12.17□□□□□ -0.46
URB2-201ENST00000258243 PIK3AP1Q6ZUJ8 805 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 IQUBQ8NA54 791 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 EXOC7Q9UPT5 735 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 GINS2Q9Y248 185 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 ARHGEF35A5YM69 484 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 GNPTABQ3T906 1256 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 GJD4Q96KN9 370 aaPredicted RBP12.17□□□□□ -0.46
URB2-201ENST00000258243 PLIN2Q99541 437 aa12.17□□□□□ -0.46
URB2-201ENST00000258243 SRRTQ9BXP5 876 aaKnown RBP12.17□□□□□ -0.46
URB2-201ENST00000258243 SETDB1Q15047 1291 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 FAM47AQ5JRC9 791 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 NCAPH2Q6IBW4 605 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 FNBP1Q96RU3 617 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 MASTLQ96GX5 879 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 NSRP1Q9H0G5 558 aaKnown RBP12.16□□□□□ -0.46
URB2-201ENST00000258243 RASSF4Q9H2L5 321 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 NONOQ15233 471 aaKnown RBP eCLIP12.16□□□□□ -0.46
URB2-201ENST00000258243 CEP57Q86XR8 500 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 PLVAPQ9BX97 442 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 ABT1Q9ULW3 272 aaKnown RBP12.16□□□□□ -0.46
URB2-201ENST00000258243 HEG1Q9ULI3 1381 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 AKR1B10O60218 316 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 RPS6KA4O75676 772 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 TUBB4AP04350 444 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 BEND3Q5T5X7 828 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 NCAPG2Q86XI2 1143 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 DBNDD1Q9H9R9 158 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 SRP68Q9UHB9 627 aaKnown RBP12.16□□□□□ -0.46
URB2-201ENST00000258243 FRMD4BQ9Y2L6 1034 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 ADCY10Q96PN6 1610 aa12.16□□□□□ -0.46
URB2-201ENST00000258243 VWA3AA6NCI4 1184 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 SYT1P21579 422 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 CCNA1P78396 465 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 DBN1Q16643 649 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 RILPL1Q5EBL4 403 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 NDUFB9Q9Y6M9 179 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 OVOS2A0A0G2JMS6 1433 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 OVOS2A0A0J9YW53 1432 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 OVOS2Q6IE36 1432 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 CLRN2A0PK11 232 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 CASQ2O14958 399 aaPredicted RBP12.15□□□□□ -0.46
URB2-201ENST00000258243 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 USP17L21D6R901 530 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 SPOUT1Q5T280 376 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms