RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 STX1AQ16623 288 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 IQUBQ8NA54 791 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 KCNQ2O43526 872 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 HSP90B2PQ58FF3 399 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 HOMER2Q9NSB8 354 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 IQGAP1P46940 1657 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 GOLGA6L9A6NEM1 432 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 C21orf2O43822 256 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 CNGA1P29973 690 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 CCND2P30279 289 aa15.15■□□□□ 0.02
PRPF38A-201ENST00000257181 ECE2O60344 883 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 ALDH1A1P00352 501 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 MYCLP12524 364 aaPredicted RBP15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 TFAP4Q01664 338 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 TKFCQ3LXA3 575 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 TCERG1LQ5VWI1 586 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 SLFN13Q68D06 897 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 CLIP2Q9UDT6 1046 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 TIMM10P62072 90 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 FNBP1Q96RU3 617 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 MIS12Q9H081 205 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 ZFYVE28Q9HCC9 887 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 CYP27B1O15528 508 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 FMNL1O95466 1100 aaPredicted RBP15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 KIFAP3Q92845 792 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 GOLGA6L10A6NI86 522 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 TLR3O15455 904 aaKnown RBP15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 EZRP15311 586 aaKnown RBP15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 NKX1-1Q15270 411 aaPredicted RBP15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 ALS2CR12Q96Q35 445 aa15.14■□□□□ 0.01
PRPF38A-201ENST00000257181 G2E3Q7L622 706 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 DCAF4Q8WV16 495 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 INTS4Q96HW7 963 aaKnown RBP15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 HERC5Q9UII4 1024 aaKnown RBP15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 IQSEC2Q5JU85 1478 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 ZAP70P43403 619 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 KIFC2Q96AC6 838 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 IQCDQ96DY2 449 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 AMNQ9BXJ7 453 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 SLC4A8Q2Y0W8 1093 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 TEX35Q5T0J7 233 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 PARK7Q99497 189 aaKnown RBP15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 GREM2Q9H772 168 aa15.13■□□□□ 0.01
PRPF38A-201ENST00000257181 MED23Q9ULK4 1368 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 USP17L5A8MUK1 530 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 YARSP54577 528 aaKnown RBP15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 CCDC144CPQ8IYA2 1237 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 LMBR1Q8WVP7 490 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 ZNF594Q96JF6 807 aaPredicted RBP15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 H7C1W4 665 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 SYKP43405 635 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 ASIC1P78348 528 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 CFAP100Q494V2 611 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 KCNV1Q6PIU1 500 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 GABPB2Q8TAK5 448 aaPredicted RBP15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 PPP2R3CQ969Q6 453 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 TEKT3Q9BXF9 490 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 SERPINB13Q9UIV8 391 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 PPM1FP49593 454 aaPredicted RBP15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 BCAMP50895 628 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 ATP6V0A1Q93050 837 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 PLEKHF1Q96S99 279 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 LRFN2Q9ULH4 789 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 BCORL1Q5H9F3 1711 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 CHMLP26374 656 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 CNNM4Q6P4Q7 775 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 REM2Q8IYK8 340 aaPredicted RBP15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 ZSCAN10Q96SZ4 725 aaPredicted RBP15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 CCPG1Q9ULG6 757 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 DNM3Q9UQ16 869 aa15.12■□□□□ 0.01
PRPF38A-201ENST00000257181 HOXC6P09630 235 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 PDE6AP16499 860 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 CTNNA2P26232 953 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 CCT6AP40227 531 aaKnown RBP15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 KMT5BQ4FZB7 885 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 GLG1Q92896 1179 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 REXO1Q8N1G1 1221 aaKnown RBP15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 AGBL3Q8NEM8 1001 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 TRIM47Q96LD4 638 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 EPB41P11171 864 aaKnown RBP15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 GCFC2P16383 781 aaKnown RBP15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 GSDMDP57764 484 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 TPCN1Q9ULQ1 816 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 VWA3BQ502W6 1294 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 STRIP1Q5VSL9 837 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 MIER3Q7Z3K6 550 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 EXOC4Q96A65 974 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 TTC14Q96N46 770 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 PLA2G12BQ9BX93 195 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 FEM1BQ9UK73 627 aa15.11■□□□□ 0.01
PRPF38A-201ENST00000257181 ERLIN1O75477 346 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 GYG1P46976 350 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 MIS18BP1Q6P0N0 1132 aa15.1■□□□□ 0.01
PRPF38A-201ENST00000257181 TM6SF1Q9BZW5 370 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms