RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 MYH6P13533 1939 aa22.05■■□□□ 1.12
TRIM47-201ENST00000254816 FIBPO43427 364 aa22.04■■□□□ 1.12
TRIM47-201ENST00000254816 WDHD1O75717 1129 aaPredicted RBP22.04■■□□□ 1.12
TRIM47-201ENST00000254816 TFAP4Q01664 338 aa22.04■■□□□ 1.12
TRIM47-201ENST00000254816 CDC42EP5Q6NZY7 148 aa22.04■■□□□ 1.12
TRIM47-201ENST00000254816 CMTR1Q8N1G2 835 aaKnown RBP22.04■■□□□ 1.12
TRIM47-201ENST00000254816 RBM27Q9P2N5 1060 aaKnown RBP22.04■■□□□ 1.12
TRIM47-201ENST00000254816 MYH8P13535 1937 aa22.04■■□□□ 1.12
TRIM47-201ENST00000254816 RBM5P52756 815 aaKnown RBP eCLIP22.04■■□□□ 1.129e-8■■■□□ 15.5
TRIM47-201ENST00000254816 FKBP1AP62942 108 aaKnown RBP22.04■■□□□ 1.12
TRIM47-201ENST00000254816 LARGE2Q8N3Y3 721 aa22.04■■□□□ 1.12
TRIM47-201ENST00000254816 AIFM3Q96NN9 605 aa22.04■■□□□ 1.12
TRIM47-201ENST00000254816 RRAGDQ9NQL2 400 aaPredicted RBP22.04■■□□□ 1.12
TRIM47-201ENST00000254816 UBE2Q2LH0YL09 131 aa22.03■■□□□ 1.12
TRIM47-201ENST00000254816 GADD45BO75293 160 aaPredicted RBP22.03■■□□□ 1.12
TRIM47-201ENST00000254816 RESTQ13127 1097 aa22.03■■□□□ 1.12
TRIM47-201ENST00000254816 RTN1Q16799 776 aa22.03■■□□□ 1.12
TRIM47-201ENST00000254816 TPRNQ4KMQ1 711 aa22.03■■□□□ 1.12
TRIM47-201ENST00000254816 GRIPAP1Q4V328 841 aa22.03■■□□□ 1.12
TRIM47-201ENST00000254816 CCDC82Q8N4S0 544 aa22.03■■□□□ 1.12
TRIM47-201ENST00000254816 ZSCAN23Q3MJ62 389 aa22.02■■□□□ 1.12
TRIM47-201ENST00000254816 SGIP1Q9BQI5 828 aa22.02■■□□□ 1.12
TRIM47-201ENST00000254816 NID2Q14112 1375 aa22.02■■□□□ 1.12
TRIM47-201ENST00000254816 FER1L6Q2WGJ9 1857 aa22.02■■□□□ 1.11
TRIM47-201ENST00000254816 RAD17O75943 681 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 CDKL5O76039 1030 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 CDK8P49336 464 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 CACNB3P54284 484 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 DALRD3Q5D0E6 543 aaKnown RBP22.01■■□□□ 1.11
TRIM47-201ENST00000254816 CPLX2Q6PUV4 134 aaKnown RBP22.01■■□□□ 1.11
TRIM47-201ENST00000254816 FANCBQ8NB91 859 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 C8orf76Q96K31 380 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 ZDHHC15Q96MV8 337 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 IL17RBQ9NRM6 502 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 IARSP41252 1262 aaKnown RBP22.01■■□□□ 1.11
TRIM47-201ENST00000254816 NFIAQ12857 509 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 C16orf86Q6ZW13 317 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 ZNF444Q8N0Y2 327 aaPredicted RBP22.01■■□□□ 1.11
TRIM47-201ENST00000254816 SLC26A6Q9BXS9 759 aa22.01■■□□□ 1.11
TRIM47-201ENST00000254816 RASA1P20936 1047 aa22■■□□□ 1.11
TRIM47-201ENST00000254816 TFIP11Q9UBB9 837 aaKnown RBP22■■□□□ 1.11
TRIM47-201ENST00000254816 TSPY3P0CV98 308 aa22■■□□□ 1.11
TRIM47-201ENST00000254816 TSPY8P0CW00 308 aa22■■□□□ 1.11
TRIM47-201ENST00000254816 RCSD1Q6JBY9 416 aa22■■□□□ 1.11
TRIM47-201ENST00000254816 CATIPQ7Z7H3 387 aa22■■□□□ 1.11
TRIM47-201ENST00000254816 ALG1Q9BT22 464 aa21.99■■□□□ 1.11
TRIM47-201ENST00000254816 SSRP1Q08945 709 aaKnown RBP21.99■■□□□ 1.11
TRIM47-201ENST00000254816 TMEM87AQ8NBN3 555 aa21.99■■□□□ 1.11
TRIM47-201ENST00000254816 PSMD14O00487 310 aa21.98■■□□□ 1.11
TRIM47-201ENST00000254816 IFNAR1P17181 557 aa21.98■■□□□ 1.11
TRIM47-201ENST00000254816 PTGER2P43116 358 aa21.98■■□□□ 1.11
TRIM47-201ENST00000254816 TROAPQ12815 778 aa21.98■■□□□ 1.11
TRIM47-201ENST00000254816 ZFPM1Q8IX07 1006 aa21.98■■□□□ 1.11
TRIM47-201ENST00000254816 OSBPL5Q9H0X9 879 aaPredicted RBP21.98■■□□□ 1.11
TRIM47-201ENST00000254816 ZSCAN16Q9H4T2 348 aaPredicted RBP21.98■■□□□ 1.11
TRIM47-201ENST00000254816 ZNF445P59923 1031 aa21.97■■□□□ 1.11
TRIM47-201ENST00000254816 KRT85P78386 507 aa21.97■■□□□ 1.11
TRIM47-201ENST00000254816 SOGA3Q5TF21 947 aa21.97■■□□□ 1.11
TRIM47-201ENST00000254816 FBXO18Q8NFZ0 1043 aa21.97■■□□□ 1.11
TRIM47-201ENST00000254816 MRIQ9BWK5 157 aa21.97■■□□□ 1.11
TRIM47-201ENST00000254816 FMNL1O95466 1100 aaPredicted RBP21.97■■□□□ 1.11
TRIM47-201ENST00000254816 GUCY1A2P33402 732 aa21.97■■□□□ 1.11
TRIM47-201ENST00000254816 RCAN1P53805 252 aa21.97■■□□□ 1.11
TRIM47-201ENST00000254816 HDLBPQ00341 1268 aaKnown RBP21.97■■□□□ 1.11
TRIM47-201ENST00000254816 NBPF11Q86T75 865 aa21.97■■□□□ 1.11
TRIM47-201ENST00000254816 SERPINA10Q9UK55 444 aa21.97■■□□□ 1.11
TRIM47-201ENST00000254816 ZBTB12Q9Y330 459 aaPredicted RBP21.97■■□□□ 1.11
TRIM47-201ENST00000254816 SLURP2P0DP57 97 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 TCP10Q12799 353 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 BCS1LQ9Y276 419 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 CCDC196A0A1B0GTZ2 297 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 PLEKHA8P1O95397 391 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 NASPP49321 788 aaPredicted RBP21.96■■□□□ 1.11
TRIM47-201ENST00000254816 CFAP100Q494V2 611 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 RSBN1LQ6PCB5 846 aaPredicted RBP21.96■■□□□ 1.11
TRIM47-201ENST00000254816 TTC6Q86TZ1 520 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 CRACR2BQ8N4Y2 399 aaPredicted RBP21.96■■□□□ 1.11
TRIM47-201ENST00000254816 ZNF287Q9HBT7 754 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 TMEM63CQ9P1W3 806 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 SIPA1L1O43166 1804 aa21.96■■□□□ 1.11
TRIM47-201ENST00000254816 BAZ2BQ9UIF8 2168 aaKnown RBP21.96■■□□□ 1.11
TRIM47-201ENST00000254816 STK36Q9NRP7 1315 aa21.95■■□□□ 1.1
TRIM47-201ENST00000254816 DDAH1O94760 285 aa21.95■■□□□ 1.1
TRIM47-201ENST00000254816 NIM1KQ8IY84 436 aa21.95■■□□□ 1.1
TRIM47-201ENST00000254816 TDRD3Q9H7E2 651 aaKnown RBP21.95■■□□□ 1.1
TRIM47-201ENST00000254816 KAT14Q9H8E8 782 aa21.95■■□□□ 1.1
TRIM47-201ENST00000254816 CD2APQ9Y5K6 639 aa21.95■■□□□ 1.1
TRIM47-201ENST00000254816 CEBPZQ03701 1054 aaKnown RBP21.94■■□□□ 1.1
TRIM47-201ENST00000254816 PRMT6Q96LA8 375 aaPredicted RBP21.94■■□□□ 1.1
TRIM47-201ENST00000254816 TAOK3Q9H2K8 898 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 STX8Q9UNK0 236 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 VIL1P09327 827 aaKnown RBP21.94■■□□□ 1.1
TRIM47-201ENST00000254816 CALM1P0DP23 149 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 CALM2P0DP24 149 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 CALM3P0DP25 149 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 GABPAQ06546 454 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 KRT40Q6A162 431 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 DGKHQ86XP1 1220 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 FTOQ9C0B1 505 aaKnown RBP eCLIP21.94■■□□□ 1.1
TRIM47-201ENST00000254816 TCP11L1Q9NUJ3 509 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms