RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 GABPB1Q06547 395 aaPredicted RBP21.01■□□□□ 0.95
LRP3-201ENST00000253193 BLZF1Q9H2G9 400 aa21.01■□□□□ 0.95
LRP3-201ENST00000253193 CCDC87Q9NVE4 849 aa21.01■□□□□ 0.95
LRP3-201ENST00000253193 ZNF335Q9H4Z2 1342 aaPredicted RBP21.01■□□□□ 0.95
LRP3-201ENST00000253193 FAM47AQ5JRC9 791 aa21■□□□□ 0.95
LRP3-201ENST00000253193 TSPY2A6NKD2 308 aa21■□□□□ 0.95
LRP3-201ENST00000253193 FMR1Q06787 632 aaKnown RBP eCLIP21■□□□□ 0.95
LRP3-201ENST00000253193 FOXP1Q9H334 677 aaPredicted RBP21■□□□□ 0.95
LRP3-201ENST00000253193 HPSEQ9Y251 543 aa21■□□□□ 0.95
LRP3-201ENST00000253193 PTPREP23469 700 aa21■□□□□ 0.95
LRP3-201ENST00000253193 RRAGBQ5VZM2 374 aa21■□□□□ 0.95
LRP3-201ENST00000253193 SLC4A9Q96Q91 983 aa21■□□□□ 0.95
LRP3-201ENST00000253193 N4BP3O15049 544 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 KCNQ4P56696 695 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 IGSF22Q8N9C0 903 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 PCMTD1Q96MG8 357 aaPredicted RBP20.99■□□□□ 0.95
LRP3-201ENST00000253193 ABCC12Q96J65 1359 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.99■□□□□ 0.95
LRP3-201ENST00000253193 USP17L12C9JPN9 530 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 USP17L21D6R901 530 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 SMIM22K7EJ46 135 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 CRKLP46109 303 aaKnown RBP20.99■□□□□ 0.95
LRP3-201ENST00000253193 DDB1Q16531 1140 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 KIF4BQ2VIQ3 1234 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 PIK3AP1Q6ZUJ8 805 aa20.99■□□□□ 0.95
LRP3-201ENST00000253193 TSR1Q2NL82 804 aaKnown RBP20.98■□□□□ 0.95
LRP3-201ENST00000253193 VGLL2Q8N8G2 317 aa20.98■□□□□ 0.95
LRP3-201ENST00000253193 NUP88Q99567 741 aaPredicted RBP20.98■□□□□ 0.95
LRP3-201ENST00000253193 TCRBV5S4A2TA0A5A2 114 aa20.98■□□□□ 0.95
LRP3-201ENST00000253193 TOB1P50616 345 aaPredicted RBP20.98■□□□□ 0.95
LRP3-201ENST00000253193 PLIN2Q99541 437 aa20.98■□□□□ 0.95
LRP3-201ENST00000253193 AKR1B15C9JRZ8 316 aaPredicted RBP20.98■□□□□ 0.95
LRP3-201ENST00000253193 ALX1Q15699 326 aa20.98■□□□□ 0.95
LRP3-201ENST00000253193 SYMPKQ92797 1274 aaKnown RBP20.98■□□□□ 0.95
LRP3-201ENST00000253193 AATFQ9NY61 560 aaKnown RBP eCLIP20.98■□□□□ 0.95
LRP3-201ENST00000253193 TFCP2L1Q9NZI6 479 aa20.98■□□□□ 0.95
LRP3-201ENST00000253193 PUF60Q9UHX1 559 aaKnown RBP20.98■□□□□ 0.95
LRP3-201ENST00000253193 CAMTA1Q9Y6Y1 1673 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 KIF5CO60282 957 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 PLEKHA8P1O95397 391 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 ZSCAN10Q96SZ4 725 aaPredicted RBP20.97■□□□□ 0.95
LRP3-201ENST00000253193 NOL10Q9BSC4 688 aaKnown RBP20.97■□□□□ 0.95
LRP3-201ENST00000253193 ZNF652Q9Y2D9 606 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 ERVV-1B6SEH8 477 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 TXLNAP40222 546 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 MAPK8IP2Q13387 824 aaPredicted RBP20.97■□□□□ 0.95
LRP3-201ENST00000253193 TUBB4AP04350 444 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 CCDC175P0C221 793 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 RIC1Q4ADV7 1423 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 TOGARAM2Q6ZUX3 1019 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 STAG1Q8WVM7 1258 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 ZNF512BQ96KM6 892 aaPredicted RBP20.97■□□□□ 0.95
LRP3-201ENST00000253193 VPS16Q9H269 839 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 FBXO2Q9UK22 296 aaPredicted RBP20.97■□□□□ 0.95
LRP3-201ENST00000253193 RTL9Q8NET4 1388 aa20.97■□□□□ 0.95
LRP3-201ENST00000253193 CLCN6P51797 869 aa20.96■□□□□ 0.95
LRP3-201ENST00000253193 CTNND2Q9UQB3 1225 aa20.96■□□□□ 0.95
LRP3-201ENST00000253193 SRPRBQ9Y5M8 271 aaKnown RBP20.96■□□□□ 0.95
LRP3-201ENST00000253193 GOLGA6L9A6NEM1 432 aa20.96■□□□□ 0.95
LRP3-201ENST00000253193 CDC25AP30304 524 aa20.96■□□□□ 0.95
LRP3-201ENST00000253193 SYNRGQ9UMZ2 1314 aa20.95■□□□□ 0.95
LRP3-201ENST00000253193 SEC31AO94979 1220 aaKnown RBP20.95■□□□□ 0.94
LRP3-201ENST00000253193 TTC38Q5R3I4 469 aa20.95■□□□□ 0.94
LRP3-201ENST00000253193 USP54Q70EL1 1684 aa20.95■□□□□ 0.94
LRP3-201ENST00000253193 PPP2R3AQ06190 1150 aa20.95■□□□□ 0.94
LRP3-201ENST00000253193 SOS2Q07890 1332 aaPredicted RBP20.95■□□□□ 0.94
LRP3-201ENST00000253193 COL5A2P05997 1499 aaPredicted RBP20.95■□□□□ 0.94
LRP3-201ENST00000253193 SRRTQ9BXP5 876 aaKnown RBP20.95■□□□□ 0.94
LRP3-201ENST00000253193 SCN11AQ9UI33 1791 aa20.95■□□□□ 0.94
LRP3-201ENST00000253193 WTIPA6NIX2 430 aaPredicted RBP20.94■□□□□ 0.94
LRP3-201ENST00000253193 FANCGO15287 622 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 BMP6P22004 513 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 PTGDRQ13258 359 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 PARP10Q53GL7 1025 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 ENOX1Q8TC92 643 aaKnown RBP20.94■□□□□ 0.94
LRP3-201ENST00000253193 SOWAHDA6NJG2 315 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 TEX33O43247 280 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 NMT2O60551 498 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 MTF1Q14872 753 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 ZNF569Q5MCW4 686 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 SMIM5Q71RC9 77 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 ZNF34Q8IZ26 560 aa20.94■□□□□ 0.94
LRP3-201ENST00000253193 LOC102724428A0A0B4J2F2 783 aa20.93■□□□□ 0.94
LRP3-201ENST00000253193 USP5P45974 858 aa20.93■□□□□ 0.94
LRP3-201ENST00000253193 PLCD1P51178 756 aa20.93■□□□□ 0.94
LRP3-201ENST00000253193 SIK1P57059 783 aa20.93■□□□□ 0.94
LRP3-201ENST00000253193 DZIP1Q86YF9 867 aaKnown RBP20.93■□□□□ 0.94
LRP3-201ENST00000253193 IRX2Q9BZI1 471 aaPredicted RBP20.93■□□□□ 0.94
LRP3-201ENST00000253193 MKNK2Q9HBH9 465 aa20.93■□□□□ 0.94
LRP3-201ENST00000253193 STK36Q9NRP7 1315 aa20.93■□□□□ 0.94
LRP3-201ENST00000253193 FGFR2P21802 821 aa20.93■□□□□ 0.94
LRP3-201ENST00000253193 ENAHQ8N8S7 591 aaPredicted RBP20.93■□□□□ 0.94
LRP3-201ENST00000253193 WDR24Q96S15 920 aa20.93■□□□□ 0.94
LRP3-201ENST00000253193 MCM9Q9NXL9 1143 aa20.93■□□□□ 0.94
LRP3-201ENST00000253193 STX10O60499 249 aa20.92■□□□□ 0.94
LRP3-201ENST00000253193 IQUBQ8NA54 791 aa20.92■□□□□ 0.94
LRP3-201ENST00000253193 EEF2KMTQ96G04 330 aa20.92■□□□□ 0.94
LRP3-201ENST00000253193 RNF26Q9BY78 433 aaPredicted RBP20.92■□□□□ 0.94
LRP3-201ENST00000253193 CRNKL1Q9BZJ0 848 aaKnown RBP20.92■□□□□ 0.94
LRP3-201ENST00000253193 STX8Q9UNK0 236 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms