RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 NLRP12P59046 1061 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 TUBB4BP68371 445 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 STK3Q13188 491 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 GCKRQ14397 625 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 CCDC174Q6PII3 467 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 THOC1Q96FV9 657 aaKnown RBP17.04■□□□□ 0.32
PMPCB-201ENST00000249269 METTL22Q9BUU2 404 aaPredicted RBP17.04■□□□□ 0.32
PMPCB-201ENST00000249269 ZNF609O15014 1411 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 NEURL1BA8MQ27 555 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 TEX35Q5T0J7 233 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 THEMISQ8N1K5 641 aaPredicted RBP17.04■□□□□ 0.32
PMPCB-201ENST00000249269 ANKRD24Q8TF21 1146 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 BHMTQ93088 406 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 TRIM11Q96F44 468 aa17.04■□□□□ 0.32
PMPCB-201ENST00000249269 USP5P45974 858 aa17.03■□□□□ 0.32
PMPCB-201ENST00000249269 MCTP2Q6DN12 878 aa17.03■□□□□ 0.32
PMPCB-201ENST00000249269 SAPCD2Q86UD0 394 aa17.03■□□□□ 0.32
PMPCB-201ENST00000249269 PPP1R13BQ96KQ4 1090 aa17.03■□□□□ 0.32
PMPCB-201ENST00000249269 USP28Q96RU2 1077 aa17.03■□□□□ 0.32
PMPCB-201ENST00000249269 GOLPH3LQ9H4A5 285 aa17.03■□□□□ 0.32
PMPCB-201ENST00000249269 CPSF2Q9P2I0 782 aaKnown RBP17.03■□□□□ 0.32
PMPCB-201ENST00000249269 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.03■□□□□ 0.32
PMPCB-201ENST00000249269 ME1P48163 572 aa17.03■□□□□ 0.32
PMPCB-201ENST00000249269 ETF1P62495 437 aaKnown RBP17.03■□□□□ 0.32
PMPCB-201ENST00000249269 PRPF4BQ13523 1007 aaKnown RBP17.03■□□□□ 0.32
PMPCB-201ENST00000249269 CWF19L2Q2TBE0 894 aaKnown RBP17.03■□□□□ 0.32
PMPCB-201ENST00000249269 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
PMPCB-201ENST00000249269 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.03■□□□□ 0.32
PMPCB-201ENST00000249269 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
PMPCB-201ENST00000249269 GJA3Q9Y6H8 435 aa17.03■□□□□ 0.32
PMPCB-201ENST00000249269 V9GYY5 206 aaPredicted RBP17.03■□□□□ 0.32
PMPCB-201ENST00000249269 CDKL5O76039 1030 aa17.02■□□□□ 0.32
PMPCB-201ENST00000249269 MMEP08473 750 aa17.02■□□□□ 0.32
PMPCB-201ENST00000249269 RFX5P48382 616 aaPredicted RBP17.02■□□□□ 0.32
PMPCB-201ENST00000249269 E4F1Q66K89 784 aaPredicted RBP17.02■□□□□ 0.32
PMPCB-201ENST00000249269 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.32
PMPCB-201ENST00000249269 AOPEPQ8N6M6 819 aa17.02■□□□□ 0.32
PMPCB-201ENST00000249269 SDF4Q9BRK5 362 aa17.02■□□□□ 0.32
PMPCB-201ENST00000249269 HOXC10Q9NYD6 342 aa17.02■□□□□ 0.32
PMPCB-201ENST00000249269 LAMA4Q16363 1823 aa17.02■□□□□ 0.31
PMPCB-201ENST00000249269 USP27XA6NNY8 438 aa17.02■□□□□ 0.31
PMPCB-201ENST00000249269 EFCAB8A8MWE9 144 aa17.02■□□□□ 0.31
PMPCB-201ENST00000249269 ZSCAN12O43309 604 aa17.02■□□□□ 0.31
PMPCB-201ENST00000249269 IMPDH2P12268 514 aa17.02■□□□□ 0.31
PMPCB-201ENST00000249269 ARMC3Q5W041 872 aa17.02■□□□□ 0.31
PMPCB-201ENST00000249269 LCA5Q86VQ0 697 aa17.02■□□□□ 0.31
PMPCB-201ENST00000249269 KIAA1958Q8N8K9 716 aa17.02■□□□□ 0.31
PMPCB-201ENST00000249269 TLR7Q9NYK1 1049 aaKnown RBP17.02■□□□□ 0.31
PMPCB-201ENST00000249269 CWC15Q9P013 229 aaKnown RBP17.02■□□□□ 0.31
PMPCB-201ENST00000249269 MAP3K15Q6ZN16 1313 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 PABPN1LA6NDY0 278 aaKnown RBP17.01■□□□□ 0.31
PMPCB-201ENST00000249269 KCNQ3O43525 872 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 IGKV5-2P06315 115 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 ELF2Q15723 593 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 RIC3Q7Z5B4 369 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 LINC00301Q8NCQ3 95 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 DEF6Q9H4E7 631 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 DBNLQ9UJU6 430 aaKnown RBP17.01■□□□□ 0.31
PMPCB-201ENST00000249269 CARMIL3Q8ND23 1372 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 FAM237AA0A1B0GTK4 181 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 CTDNEP1O95476 244 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 ZNF16P17020 682 aaPredicted RBP17.01■□□□□ 0.31
PMPCB-201ENST00000249269 CMA1P23946 247 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 SESN3P58005 492 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 PDIA6Q15084 440 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 PPP2R5BQ15173 497 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 TBC1D25Q3MII6 688 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 ARHGEF25Q86VW2 580 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 LTV1Q96GA3 475 aaPredicted RBP17.01■□□□□ 0.31
PMPCB-201ENST00000249269 UNC45AQ9H3U1 944 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 COMMD8Q9NX08 183 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 DNAI1Q9UI46 699 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
PMPCB-201ENST00000249269 TMA7Q9Y2S6 64 aaKnown RBP17.01■□□□□ 0.31
PMPCB-201ENST00000249269 MYCLP1P12525 358 aaPredicted RBP17■□□□□ 0.31
PMPCB-201ENST00000249269 CYP2C19P33261 490 aa17■□□□□ 0.31
PMPCB-201ENST00000249269 PREPLQ4J6C6 727 aaPredicted RBP17■□□□□ 0.31
PMPCB-201ENST00000249269 DDX54Q8TDD1 881 aaKnown RBP17■□□□□ 0.31
PMPCB-201ENST00000249269 MPHOSPH8Q99549 860 aa17■□□□□ 0.31
PMPCB-201ENST00000249269 NACA2Q9H009 215 aa17■□□□□ 0.31
PMPCB-201ENST00000249269 SPC25Q9HBM1 224 aa17■□□□□ 0.31
PMPCB-201ENST00000249269 JRKLQ9Y4A0 524 aa17■□□□□ 0.31
PMPCB-201ENST00000249269 MST1RQ04912 1400 aa17■□□□□ 0.31
PMPCB-201ENST00000249269 ABCC12Q96J65 1359 aa17■□□□□ 0.31
PMPCB-201ENST00000249269 TRIM37O94972 964 aa16.99■□□□□ 0.31
PMPCB-201ENST00000249269 HOXA10P31260 410 aaPredicted RBP16.99■□□□□ 0.31
PMPCB-201ENST00000249269 CCDC158Q5M9N0 1113 aa16.99■□□□□ 0.31
PMPCB-201ENST00000249269 ZMYM1Q5SVZ6 1142 aa16.99■□□□□ 0.31
PMPCB-201ENST00000249269 CENPTQ96BT3 561 aa16.99■□□□□ 0.31
PMPCB-201ENST00000249269 TCEANC2Q96MN5 208 aa16.99■□□□□ 0.31
PMPCB-201ENST00000249269 CEP89Q96ST8 783 aa16.99■□□□□ 0.31
PMPCB-201ENST00000249269 TBC1D7Q9P0N9 293 aa16.99■□□□□ 0.31
PMPCB-201ENST00000249269 TAF6LQ9Y6J9 622 aa16.99■□□□□ 0.31
PMPCB-201ENST00000249269 SLC3A2P08195 630 aaKnown RBP16.99■□□□□ 0.31
PMPCB-201ENST00000249269 HOXD10P28358 340 aa16.99■□□□□ 0.31
PMPCB-201ENST00000249269 PDIA3P30101 505 aaKnown RBP16.99■□□□□ 0.31
PMPCB-201ENST00000249269 PTPN12Q05209 780 aaKnown RBP16.99■□□□□ 0.31
PMPCB-201ENST00000249269 RPUSD2Q8IZ73 545 aaKnown RBP16.99■□□□□ 0.31
PMPCB-201ENST00000249269 ZHX3Q9H4I2 956 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms