RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MECOMQ03112 1051 aa22.46■■□□□ 1.19
CDC42EP1-201ENST00000249014 FUT2Q10981 343 aa22.46■■□□□ 1.19
CDC42EP1-201ENST00000249014 TFCP2L1Q9NZI6 479 aa22.46■■□□□ 1.19
CDC42EP1-201ENST00000249014 PCDHA5Q9Y5H7 936 aa22.46■■□□□ 1.19
CDC42EP1-201ENST00000249014 GSDMDP57764 484 aa22.46■■□□□ 1.19
CDC42EP1-201ENST00000249014 TPM4P67936 248 aa22.46■■□□□ 1.19
CDC42EP1-201ENST00000249014 hCG_1642624A0A1W2PR95 340 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 USP17L12C9JPN9 530 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 USP17L21D6R901 530 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 SEMA3EO15041 775 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 RGL2O15211 777 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 PPP2R5BQ15173 497 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 IFIT1BQ5T764 474 aaKnown RBP22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 TMC6Q7Z403 805 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 NLRP3Q96P20 1036 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 SETDB2Q96T68 719 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 CABP5Q9NP86 173 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 VPS54Q9P1Q0 977 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 PLEKHA8P1O95397 391 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 BMP6P22004 513 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 FANCCQ00597 558 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 NBPF5PQ86XG9 351 aaPredicted RBP22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 NYXQ9GZU5 481 aa22.45■■□□□ 1.18
CDC42EP1-201ENST00000249014 BTAF1O14981 1849 aa22.44■■□□□ 1.18
CDC42EP1-201ENST00000249014 FAM205CA6NFA0 338 aa22.44■■□□□ 1.18
CDC42EP1-201ENST00000249014 ATP2B1P20020 1258 aa22.44■■□□□ 1.18
CDC42EP1-201ENST00000249014 TROAPQ12815 778 aa22.44■■□□□ 1.18
CDC42EP1-201ENST00000249014 ARMCX5Q6P1M9 558 aa22.44■■□□□ 1.18
CDC42EP1-201ENST00000249014 AMIGO3Q86WK7 504 aa22.44■■□□□ 1.18
CDC42EP1-201ENST00000249014 AATFQ9NY61 560 aaKnown RBP eCLIP22.44■■□□□ 1.183e-6■■■■□ 23.5
CDC42EP1-201ENST00000249014 LAMB1P07942 1786 aa22.44■■□□□ 1.18
CDC42EP1-201ENST00000249014 RPS6KA4O75676 772 aa22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 PRDX5P30044 214 aa22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 HIBADHP31937 336 aaKnown RBP22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 MYL5Q02045 173 aa22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 MTERF4Q7Z6M4 381 aaKnown RBP22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 CATIPQ7Z7H3 387 aa22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 IQCA1Q86XH1 822 aa22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 POLR2DO15514 142 aaKnown RBP22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 CTIFO43310 598 aaKnown RBP22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 EARS2Q5JPH6 523 aaKnown RBP22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 ELOA2Q8IYF1 753 aaPredicted RBP22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.43■■□□□ 1.182e-6■■■■■ 37.3
CDC42EP1-201ENST00000249014 SRPRBQ9Y5M8 271 aaKnown RBP22.43■■□□□ 1.18
CDC42EP1-201ENST00000249014 GNPATO15228 680 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 PRPF3O43395 683 aaKnown RBP22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 AKAP17AQ02040 695 aaKnown RBP22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 PDE4BQ07343 736 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 CCDC88AQ3V6T2 1871 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 NYAP1Q6ZVC0 841 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 TXNRD3Q86VQ6 643 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 C8orf37Q96NL8 207 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 PHF20Q9BVI0 1012 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 DCP1AQ9NPI6 582 aaPredicted RBP22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 V9GY48 417 aaPredicted RBP22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 PDS5AQ29RF7 1337 aaKnown RBP22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 NMT2O60551 498 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 PCP11498 1178 aaKnown RBP22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 VPS72Q15906 364 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 USP49Q70CQ1 688 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 ZNF579Q8NAF0 562 aaKnown RBP22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 DPF2Q92785 391 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 SERTAD1Q9UHV2 236 aa22.42■■□□□ 1.18
CDC42EP1-201ENST00000249014 PRR29P0C7W0 189 aa22.41■■□□□ 1.18
CDC42EP1-201ENST00000249014 CCAR2Q8N163 923 aaKnown RBP22.41■■□□□ 1.18
CDC42EP1-201ENST00000249014 TRMT1Q9NXH9 659 aaKnown RBP22.41■■□□□ 1.18
CDC42EP1-201ENST00000249014 JAG2Q9Y219 1238 aa22.41■■□□□ 1.18
CDC42EP1-201ENST00000249014 KIAA1551Q9HCM1 1747 aa22.41■■□□□ 1.18
CDC42EP1-201ENST00000249014 MAST2Q6P0Q8 1798 aa22.41■■□□□ 1.18
CDC42EP1-201ENST00000249014 ZPR1O75312 459 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 TM4SF1P30408 202 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 POSTNQ15063 836 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 CEP135Q66GS9 1140 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 OLFM4Q6UX06 510 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 ANKRD2Q9GZV1 360 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 CSRNP2Q9H175 543 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 CYP2D6P10635 497 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 NGLY1Q96IV0 654 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 KCND1Q9NSA2 647 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 RBM28Q9NW13 759 aaKnown RBP22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 MAN1B1Q9UKM7 699 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 CEP131Q9UPN4 1083 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 PAXBP1Q9Y5B6 917 aa22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 TNRC6CQ9HCJ0 1690 aaKnown RBP22.4■■□□□ 1.18
CDC42EP1-201ENST00000249014 XBP1P17861 261 aa22.39■■□□□ 1.18
CDC42EP1-201ENST00000249014 KRT2P35908 639 aa22.39■■□□□ 1.18
CDC42EP1-201ENST00000249014 TPTE2Q6XPS3 522 aa22.39■■□□□ 1.18
CDC42EP1-201ENST00000249014 SLC51AQ86UW1 340 aa22.39■■□□□ 1.18
CDC42EP1-201ENST00000249014 GRAMD1CQ8IYS0 662 aa22.39■■□□□ 1.18
CDC42EP1-201ENST00000249014 PDILTQ8N807 584 aa22.39■■□□□ 1.18
CDC42EP1-201ENST00000249014 CCDC150Q8NCX0 1101 aa22.39■■□□□ 1.18
CDC42EP1-201ENST00000249014 CRNKL1Q9BZJ0 848 aaKnown RBP22.39■■□□□ 1.18
CDC42EP1-201ENST00000249014 FANCLQ9NW38 375 aa22.39■■□□□ 1.18
CDC42EP1-201ENST00000249014 WNT7AO00755 349 aa22.39■■□□□ 1.17
CDC42EP1-201ENST00000249014 ORC4O43929 436 aa22.39■■□□□ 1.17
CDC42EP1-201ENST00000249014 FAM47AQ5JRC9 791 aa22.39■■□□□ 1.17
CDC42EP1-201ENST00000249014 NT5DC1Q5TFE4 455 aa22.39■■□□□ 1.17
CDC42EP1-201ENST00000249014 TMTC3Q6ZXV5 915 aa22.39■■□□□ 1.17
CDC42EP1-201ENST00000249014 BAZ2BQ9UIF8 2168 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms