RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 OSBPP22059 807 aa17.19■□□□□ 0.34
GPN3-201ENST00000228827 EVX2Q03828 476 aa17.19■□□□□ 0.34
GPN3-201ENST00000228827 ARMC5Q96C12 935 aa17.19■□□□□ 0.34
GPN3-201ENST00000228827 EHD4Q9H223 541 aa17.19■□□□□ 0.34
GPN3-201ENST00000228827 MCM9Q9NXL9 1143 aa17.19■□□□□ 0.34
GPN3-201ENST00000228827 ZSWIM8A7E2V4 1837 aa17.19■□□□□ 0.34
GPN3-201ENST00000228827 PRKAB2O43741 272 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 GNRH1P01148 92 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 SH3D19Q5HYK7 790 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 TATDN1Q6P1N9 297 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 ANKRD13CQ8N6S4 541 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 SH3TC2Q8TF17 1288 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
GPN3-201ENST00000228827 PNMA3Q9UL41 463 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 POTEFA5A3E0 1075 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 CYP2D6P10635 497 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 FCGRTP55899 365 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 BACE1P56817 501 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 CERKLQ49MI3 558 aaPredicted RBP17.18■□□□□ 0.34
GPN3-201ENST00000228827 GINM1Q9NU53 330 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 TMOD4Q9NZQ9 345 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 SRRDQ9UH36 339 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 HTTP42858 3142 aa17.18■□□□□ 0.34
GPN3-201ENST00000228827 FOCADQ5VW36 1801 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 PHIPQ8WWQ0 1821 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 CDK5RAP2Q96SN8 1893 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 MYPNQ86TC9 1320 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 USP17L10C9JJH3 530 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 HOXD10P28358 340 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 SHMT1P34896 483 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 PABPC4Q13310 644 aaKnown RBP eCLIP17.17■□□□□ 0.345e-7■□□□□ 10
GPN3-201ENST00000228827 RAB3GAP1Q15042 981 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 NBPF11Q86T75 865 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 ZNF333Q96JL9 665 aa17.17■□□□□ 0.34
GPN3-201ENST00000228827 ASCC2Q9H1I8 757 aaPredicted RBP17.17■□□□□ 0.34
GPN3-201ENST00000228827 PRMT2P55345 433 aa17.16■□□□□ 0.34
GPN3-201ENST00000228827 PRKCZQ05513 592 aa17.16■□□□□ 0.34
GPN3-201ENST00000228827 ZYXQ15942 572 aaKnown RBP17.16■□□□□ 0.34
GPN3-201ENST00000228827 ABCB5Q2M3G0 1257 aa17.16■□□□□ 0.34
GPN3-201ENST00000228827 ZSCAN25Q6NSZ9 544 aa17.16■□□□□ 0.34
GPN3-201ENST00000228827 RAET1EQ8TD07 263 aa17.16■□□□□ 0.34
GPN3-201ENST00000228827 C19orf81C9J6K1 198 aa17.15■□□□□ 0.34
GPN3-201ENST00000228827 IRX3P78415 501 aaPredicted RBP17.15■□□□□ 0.34
GPN3-201ENST00000228827 UBE3CQ15386 1083 aa17.15■□□□□ 0.34
GPN3-201ENST00000228827 OTUD7AQ8TE49 926 aaPredicted RBP17.15■□□□□ 0.34
GPN3-201ENST00000228827 FEZ1Q99689 392 aa17.15■□□□□ 0.34
GPN3-201ENST00000228827 TMEM106CQ9BVX2 250 aa17.15■□□□□ 0.34
GPN3-201ENST00000228827 PUS7LQ9H0K6 701 aaKnown RBP17.15■□□□□ 0.34
GPN3-201ENST00000228827 CABP5Q9NP86 173 aa17.15■□□□□ 0.34
GPN3-201ENST00000228827 GABRQQ9UN88 632 aa17.15■□□□□ 0.34
GPN3-201ENST00000228827 ATAD5Q96QE3 1844 aa17.14■□□□□ 0.34
GPN3-201ENST00000228827 MPHOSPH10O00566 681 aaKnown RBP17.14■□□□□ 0.33
GPN3-201ENST00000228827 TNPO2O14787 897 aaKnown RBP17.14■□□□□ 0.33
GPN3-201ENST00000228827 GABPAQ06546 454 aa17.14■□□□□ 0.33
GPN3-201ENST00000228827 SLC44A5Q8NCS7 719 aa17.14■□□□□ 0.33
GPN3-201ENST00000228827 DYNLL2Q96FJ2 89 aa17.14■□□□□ 0.33
GPN3-201ENST00000228827 EMILIN3Q9NT22 766 aa17.14■□□□□ 0.33
GPN3-201ENST00000228827 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
GPN3-201ENST00000228827 CYP2D7A0A087X1C5 515 aa17.13■□□□□ 0.33
GPN3-201ENST00000228827 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
GPN3-201ENST00000228827 EN2P19622 333 aaPredicted RBP17.13■□□□□ 0.33
GPN3-201ENST00000228827 USP17L2Q6R6M4 530 aa17.13■□□□□ 0.33
GPN3-201ENST00000228827 KBTBD3Q8NAB2 608 aa17.13■□□□□ 0.33
GPN3-201ENST00000228827 ACER1Q8TDN7 264 aa17.13■□□□□ 0.33
GPN3-201ENST00000228827 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
GPN3-201ENST00000228827 ATP8A2Q9NTI2 1148 aa17.13■□□□□ 0.33
GPN3-201ENST00000228827 PEX10O60683 326 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 GRK4P32298 578 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 GCLCP48506 637 aaPredicted RBP17.12■□□□□ 0.33
GPN3-201ENST00000228827 SEPT2Q15019 361 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 FAM110CQ1W6H9 321 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 BIN2Q9UBW5 565 aaPredicted RBP17.12■□□□□ 0.33
GPN3-201ENST00000228827 DDX60LQ5H9U9 1706 aaKnown RBP17.12■□□□□ 0.33
GPN3-201ENST00000228827 PTPRFP10586 1907 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 LOC285556D6RIA3 1793 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 USP17L21D6R901 530 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 GUCY1A2P33402 732 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 ANKRD45Q5TZF3 282 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 DDRGK1Q96HY6 314 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 ZBTB47Q9UFB7 747 aaPredicted RBP17.12■□□□□ 0.33
GPN3-201ENST00000228827 TAOK2Q9UL54 1235 aa17.12■□□□□ 0.33
GPN3-201ENST00000228827 MYH1P12882 1939 aa17.11■□□□□ 0.33
GPN3-201ENST00000228827 NAV1Q8NEY1 1877 aa17.11■□□□□ 0.33
GPN3-201ENST00000228827 ERC2O15083 957 aa17.11■□□□□ 0.33
GPN3-201ENST00000228827 HOXA7P31268 230 aaPredicted RBP17.11■□□□□ 0.33
GPN3-201ENST00000228827 FLT3LGP49771 235 aa17.11■□□□□ 0.33
GPN3-201ENST00000228827 HERVK_113P62684 666 aa17.11■□□□□ 0.33
GPN3-201ENST00000228827 MTFR1Q15390 333 aa17.11■□□□□ 0.33
GPN3-201ENST00000228827 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
GPN3-201ENST00000228827 OSBP2Q969R2 916 aa17.11■□□□□ 0.33
GPN3-201ENST00000228827 TTC41PQ6P2S7 1318 aa17.1■□□□□ 0.33
GPN3-201ENST00000228827 RNF113AO15541 343 aaKnown RBP17.1■□□□□ 0.33
GPN3-201ENST00000228827 MX1P20591 662 aa17.1■□□□□ 0.33
GPN3-201ENST00000228827 USP14P54578 494 aa17.1■□□□□ 0.33
GPN3-201ENST00000228827 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
GPN3-201ENST00000228827 PI4K2BQ8TCG2 481 aa17.1■□□□□ 0.33
GPN3-201ENST00000228827 COA7Q96BR5 231 aa17.1■□□□□ 0.33
GPN3-201ENST00000228827 STRBPQ96SI9 672 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms