RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 EPSTI1Q96J88 318 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.38■□□□□ 0.21
PRDM4-201ENST00000228437 PTPRMP28827 1452 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 PDCLQ13371 301 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 LRRC31Q6UY01 552 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 PUS7LQ9H0K6 701 aaKnown RBP16.38■□□□□ 0.21
PRDM4-201ENST00000228437 CSRNP2Q9H175 543 aa16.38■□□□□ 0.21
PRDM4-201ENST00000228437 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
PRDM4-201ENST00000228437 USO1O60763 962 aaKnown RBP16.37■□□□□ 0.21
PRDM4-201ENST00000228437 MMS22LQ6ZRQ5 1243 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 XAGE2Q96GT9 111 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 CCDC42Q96M95 316 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 PCDHB6Q9Y5E3 794 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
PRDM4-201ENST00000228437 ZNF609O15014 1411 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 LRRIQ3A6PVS8 624 aaPredicted RBP16.37■□□□□ 0.21
PRDM4-201ENST00000228437 GBP2P32456 591 aaPredicted RBP16.37■□□□□ 0.21
PRDM4-201ENST00000228437 NLRP5P59047 1200 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 CCDC178Q5BJE1 867 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 ZMYM1Q5SVZ6 1142 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 EHD4Q9H223 541 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 MMRN2Q9H8L6 949 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 CYLC1P35663 651 aaPredicted RBP16.37■□□□□ 0.21
PRDM4-201ENST00000228437 E2F5Q15329 346 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.37■□□□□ 0.21
PRDM4-201ENST00000228437 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 HGSO14964 777 aaPredicted RBP16.37■□□□□ 0.21
PRDM4-201ENST00000228437 NAA25Q14CX7 972 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 CFAP58Q5T655 872 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 MCTP2Q6DN12 878 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 CACNA2D4Q7Z3S7 1137 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 NOSTRINQ8IVI9 506 aa16.37■□□□□ 0.21
PRDM4-201ENST00000228437 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 OPA1O60313 960 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
PRDM4-201ENST00000228437 KCNB2Q92953 911 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 FAM89AQ96GI7 184 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 ZHX3Q9H4I2 956 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
PRDM4-201ENST00000228437 EYA2O00167 538 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 EP400NLQ6ZTU2 488 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 KAZALD1Q96I82 304 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 BPIFA3Q9BQP9 254 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
PRDM4-201ENST00000228437 YEATS2Q9ULM3 1422 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 ZCCHC11Q5TAX3 1644 aaKnown RBP16.35■□□□□ 0.21
PRDM4-201ENST00000228437 HOXB7P09629 217 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 CHRNA2Q15822 529 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 MICALCLQ6ZW33 695 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 MED23Q9ULK4 1368 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 KIAA1210Q9ULL0 1709 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 PLCD1P51178 756 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 ANKZF1Q9H8Y5 726 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 SMIM23A6NLE4 172 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 FXR1P51114 621 aaKnown RBP eCLIP16.35■□□□□ 0.21
PRDM4-201ENST00000228437 NCAPGQ9BPX3 1015 aa16.35■□□□□ 0.21
PRDM4-201ENST00000228437 ZNF185O15231 689 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 RPSAP08865 295 aaKnown RBP16.34■□□□□ 0.21
PRDM4-201ENST00000228437 ACTN3Q08043 901 aaPredicted RBP16.34■□□□□ 0.21
PRDM4-201ENST00000228437 SPATA1Q5VX52 437 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
PRDM4-201ENST00000228437 CHP1Q99653 195 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
PRDM4-201ENST00000228437 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 GUCY2CP25092 1073 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
PRDM4-201ENST00000228437 PPARAQ07869 468 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 TBC1D8BQ0IIM8 1120 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 IFT88Q13099 833 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 RILPL1Q5EBL4 403 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 ENOX1Q8TC92 643 aaKnown RBP16.34■□□□□ 0.21
PRDM4-201ENST00000228437 NELFBQ8WX92 580 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 APPBP2Q92624 585 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 SENP2Q9HC62 589 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 E7EVH7 732 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 RAD21O60216 631 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 TACC1O75410 805 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 STAT6P42226 847 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 CCDC121Q6ZUS5 278 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
PRDM4-201ENST00000228437 KAT14Q9H8E8 782 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 L1RE1Q9UN81 338 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 A1BGP04217 495 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 KRT83P78385 493 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 TSGA10IPQ3SY00 556 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 IP6K1Q92551 441 aa16.34■□□□□ 0.21
PRDM4-201ENST00000228437 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
PRDM4-201ENST00000228437 CCDC196A0A1B0GTZ2 297 aa16.33■□□□□ 0.21
PRDM4-201ENST00000228437 MFAP3LO75121 409 aa16.33■□□□□ 0.21
PRDM4-201ENST00000228437 ABL1P00519 1130 aa16.33■□□□□ 0.21
PRDM4-201ENST00000228437 ARMT1Q9H993 441 aa16.33■□□□□ 0.21
PRDM4-201ENST00000228437 GOPCQ9HD26 462 aa16.33■□□□□ 0.21
PRDM4-201ENST00000228437 SLC4A4Q9Y6R1 1079 aa16.33■□□□□ 0.21
PRDM4-201ENST00000228437 TUBBP07437 444 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms