RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 SPATA1Q5VX52 437 aa17.6■□□□□ 0.41
VTN-201ENST00000226218 DIS3L2Q8IYB7 885 aaKnown RBP17.6■□□□□ 0.41
VTN-201ENST00000226218 C10orf67Q8IYJ2 551 aa17.6■□□□□ 0.41
VTN-201ENST00000226218 ISCA1Q9BUE6 129 aa17.6■□□□□ 0.41
VTN-201ENST00000226218 SLC26A6Q9BXS9 759 aa17.6■□□□□ 0.41
VTN-201ENST00000226218 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
VTN-201ENST00000226218 ITIH6Q6UXX5 1313 aa17.6■□□□□ 0.41
VTN-201ENST00000226218 MYH6P13533 1939 aa17.6■□□□□ 0.41
VTN-201ENST00000226218 SEMA3EO15041 775 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 EIF3JO75822 258 aaKnown RBP17.59■□□□□ 0.41
VTN-201ENST00000226218 CD44P16070 742 aaKnown RBP17.59■□□□□ 0.41
VTN-201ENST00000226218 ZC3H6P61129 1189 aaKnown RBP17.59■□□□□ 0.41
VTN-201ENST00000226218 VSNL1P62760 191 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 CCDC57Q2TAC2 916 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 ZNF569Q5MCW4 686 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 SLC35F6Q8N357 371 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 CCDC51Q96ER9 411 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 ZNF512BQ96KM6 892 aaPredicted RBP17.59■□□□□ 0.41
VTN-201ENST00000226218 MYL10Q9BUA6 226 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.59■□□□□ 0.41
VTN-201ENST00000226218 EFCC1Q9HA90 598 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 FAN1Q9Y2M0 1017 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 DOCK2Q92608 1830 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 UBE3CQ15386 1083 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 SH3RF1Q7Z6J0 888 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 RSPH14Q9UHP6 348 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 TTF2Q9UNY4 1162 aaKnown RBP17.59■□□□□ 0.41
VTN-201ENST00000226218 PCDHB6Q9Y5E3 794 aa17.59■□□□□ 0.41
VTN-201ENST00000226218 CTAGE9A4FU28 777 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 TFRCP02786 760 aaKnown RBP17.58■□□□□ 0.4
VTN-201ENST00000226218 GYPCP04921 128 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 NOP2P46087 812 aaKnown RBP17.58■□□□□ 0.4
VTN-201ENST00000226218 AMPD2Q01433 879 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 CASP8Q14790 479 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 WHAMMP3Q1A5X7 153 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 LEKR1Q6ZMV7 388 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 USP49Q70CQ1 688 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 PPFIBP1Q86W92 1011 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 FAM71BQ8TC56 605 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 WASF1Q92558 559 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 PLA2G12BQ9BX93 195 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 ZBTB3Q9H5J0 574 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 TACC3Q9Y6A5 838 aa17.58■□□□□ 0.4
VTN-201ENST00000226218 ZNF142P52746 1687 aaPredicted RBP17.58■□□□□ 0.4
VTN-201ENST00000226218 SYNRGQ9UMZ2 1314 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 ARHGAP25P42331 645 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 ALX1Q15699 326 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 KIF4BQ2VIQ3 1234 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 MYH13Q9UKX3 1938 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 CSF1RP07333 972 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 TUBBP07437 444 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 CASP14P31944 242 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 WDR93Q6P2C0 686 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 CNGA4Q8IV77 575 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 GBP3Q9H0R5 595 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 PIH1D3Q9NQM4 214 aaKnown RBP17.57■□□□□ 0.4
VTN-201ENST00000226218 KCNJ14Q9UNX9 436 aa17.57■□□□□ 0.4
VTN-201ENST00000226218 A0A087X0B3 334 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 ABL1P00519 1130 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 A1BGP04217 495 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 FXR1P51114 621 aaKnown RBP eCLIP17.56■□□□□ 0.4
VTN-201ENST00000226218 ERVK-24P63145 666 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 FOXR1Q6PIV2 292 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 CTAGE1Q96RT6 745 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 CDC5LQ99459 802 aaKnown RBP17.56■□□□□ 0.4
VTN-201ENST00000226218 NAPGQ99747 312 aaPredicted RBP17.56■□□□□ 0.4
VTN-201ENST00000226218 CSRNP2Q9H175 543 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 STRN4Q9NRL3 753 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 MYO1AQ9UBC5 1043 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 TAOK2Q9UL54 1235 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 ARAP2Q8WZ64 1704 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 MAPK8IP2Q13387 824 aaPredicted RBP17.56■□□□□ 0.4
VTN-201ENST00000226218 SAFBQ15424 915 aaKnown RBP eCLIP17.56■□□□□ 0.4
VTN-201ENST00000226218 WWC2Q6AWC2 1192 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 ACRBPQ8NEB7 543 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 AATFQ9NY61 560 aaKnown RBP eCLIP17.56■□□□□ 0.4
VTN-201ENST00000226218 WWC3Q9ULE0 1092 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 SLC12A7Q9Y666 1083 aa17.56■□□□□ 0.4
VTN-201ENST00000226218 CTAGE15A4D2H0 777 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 LRRIQ3A6PVS8 624 aaPredicted RBP17.55■□□□□ 0.4
VTN-201ENST00000226218 PPP1R3GB7ZBB8 358 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 RHOXF2BP0C7M4 288 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 CTAGE8P0CG41 777 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 PIP4K2BP78356 416 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 NR5A1Q13285 461 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 CTAGE6Q86UF2 777 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 CTAGE4Q8IX94 777 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 CPLX3Q8WVH0 158 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 RHOXF2Q9BQY4 288 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 EPB41L4AQ9HCS5 686 aaPredicted RBP17.55■□□□□ 0.4
VTN-201ENST00000226218 INCENPQ9NQS7 918 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 ZSWIM5Q9P217 1185 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 RIPOR2Q9Y4F9 1068 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 MYH2Q9UKX2 1941 aa17.55■□□□□ 0.4
VTN-201ENST00000226218 ZNF532Q9HCE3 1301 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms