RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 GRAMD1CQ8IYS0 662 aa17.53■□□□□ 0.4
TGFB1-201ENST00000221930 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
TGFB1-201ENST00000221930 STAG1Q8WVM7 1258 aa17.53■□□□□ 0.4
TGFB1-201ENST00000221930 ECM29Q5VYK3 1845 aa17.53■□□□□ 0.4
TGFB1-201ENST00000221930 ERICH2A1L162 156 aa17.52■□□□□ 0.4
TGFB1-201ENST00000221930 POLR2DO15514 142 aaKnown RBP17.52■□□□□ 0.4
TGFB1-201ENST00000221930 IGHMBP2P38935 993 aaKnown RBP17.52■□□□□ 0.4
TGFB1-201ENST00000221930 PSEN1P49768 467 aa17.52■□□□□ 0.4
TGFB1-201ENST00000221930 ZNF827Q17R98 1081 aa17.52■□□□□ 0.4
TGFB1-201ENST00000221930 OLFM4Q6UX06 510 aa17.52■□□□□ 0.4
TGFB1-201ENST00000221930 GEMIN8Q9NWZ8 242 aaKnown RBP17.52■□□□□ 0.4
TGFB1-201ENST00000221930 NIP7Q9Y221 180 aaKnown RBP eCLIP17.52■□□□□ 0.4
TGFB1-201ENST00000221930 STK36Q9NRP7 1315 aa17.52■□□□□ 0.4
TGFB1-201ENST00000221930 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
TGFB1-201ENST00000221930 CHRNDQ07001 517 aa17.52■□□□□ 0.4
TGFB1-201ENST00000221930 CRACR2BQ8N4Y2 399 aaPredicted RBP17.52■□□□□ 0.4
TGFB1-201ENST00000221930 KCND1Q9NSA2 647 aa17.52■□□□□ 0.4
TGFB1-201ENST00000221930 OGFRQ9NZT2 677 aa17.52■□□□□ 0.4
TGFB1-201ENST00000221930 hCG_1642624A0A1W2PR95 340 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 CYP7A1P22680 504 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 CCDC152Q4G0S7 254 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 CERS3Q8IU89 383 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 WASF1Q92558 559 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 LOC102724428A0A0B4J2F2 783 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 PRR29P0C7W0 189 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 SIK1P57059 783 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 USP49Q70CQ1 688 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 ZNF654Q8IZM8 581 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 FANCBQ8NB91 859 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
TGFB1-201ENST00000221930 MDM2Q00987 491 aaPredicted RBP17.51■□□□□ 0.39
TGFB1-201ENST00000221930 PPARAQ07869 468 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 ELF2Q15723 593 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 CABP5Q9NP86 173 aa17.51■□□□□ 0.39
TGFB1-201ENST00000221930 FBXO2Q9UK22 296 aaPredicted RBP17.51■□□□□ 0.39
TGFB1-201ENST00000221930 GNAT2P19087 354 aa17.5■□□□□ 0.39
TGFB1-201ENST00000221930 GYG1P46976 350 aa17.5■□□□□ 0.39
TGFB1-201ENST00000221930 CLEC4GQ6UXB4 293 aa17.5■□□□□ 0.39
TGFB1-201ENST00000221930 HOMER1Q86YM7 354 aa17.5■□□□□ 0.39
TGFB1-201ENST00000221930 SERTAD1Q9UHV2 236 aa17.5■□□□□ 0.39
TGFB1-201ENST00000221930 PNPLA7Q6ZV29 1317 aa17.5■□□□□ 0.39
TGFB1-201ENST00000221930 CYP2D7A0A087X1C5 515 aa17.5■□□□□ 0.39
TGFB1-201ENST00000221930 RAI14Q9P0K7 980 aa17.5■□□□□ 0.39
TGFB1-201ENST00000221930 CHD4Q14839 1912 aa17.5■□□□□ 0.39
TGFB1-201ENST00000221930 CNTNAP4Q9C0A0 1308 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 LY75O60449 1722 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 COL24A1Q17RW2 1714 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 FAM205CA6NFA0 338 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 NRDCO43847 1150 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 CAMTA2O94983 1202 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 DEXIO95424 95 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 PTPREP23469 700 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 POSTNQ15063 836 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
TGFB1-201ENST00000221930 LRRN4CLQ8ND94 238 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 PSDA5PKW4 1024 aaPredicted RBP17.49■□□□□ 0.39
TGFB1-201ENST00000221930 PRDM1O75626 825 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 SLFN14P0C7P3 912 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 CAPN2P17655 700 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 FMR1Q06787 632 aaKnown RBP eCLIP17.49■□□□□ 0.39
TGFB1-201ENST00000221930 RILPL1Q5EBL4 403 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 FOXP1Q9H334 677 aaPredicted RBP17.49■□□□□ 0.39
TGFB1-201ENST00000221930 INTS13Q9NVM9 706 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 MAN1B1Q9UKM7 699 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 ZNF652Q9Y2D9 606 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 TNKSO95271 1327 aa17.49■□□□□ 0.39
TGFB1-201ENST00000221930 SLU7O95391 586 aaKnown RBP17.48■□□□□ 0.39
TGFB1-201ENST00000221930 ITPK1Q13572 414 aa17.48■□□□□ 0.39
TGFB1-201ENST00000221930 KMT5BQ4FZB7 885 aa17.48■□□□□ 0.39
TGFB1-201ENST00000221930 DOCK2Q92608 1830 aa17.48■□□□□ 0.39
TGFB1-201ENST00000221930 NTSR2O95665 410 aa17.48■□□□□ 0.39
TGFB1-201ENST00000221930 TOP1P11387 765 aaKnown RBP17.48■□□□□ 0.39
TGFB1-201ENST00000221930 VSTM4Q8IW00 320 aa17.48■□□□□ 0.39
TGFB1-201ENST00000221930 VPS54Q9P1Q0 977 aa17.48■□□□□ 0.39
TGFB1-201ENST00000221930 CALCOCO1Q9P1Z2 691 aa17.48■□□□□ 0.39
TGFB1-201ENST00000221930 CCDC196A0A1B0GTZ2 297 aa17.47■□□□□ 0.39
TGFB1-201ENST00000221930 KIF2AO00139 706 aaPredicted RBP17.47■□□□□ 0.39
TGFB1-201ENST00000221930 CBFA2T2O43439 604 aa17.47■□□□□ 0.39
TGFB1-201ENST00000221930 ERO1AQ96HE7 468 aa17.47■□□□□ 0.39
TGFB1-201ENST00000221930 RNF41Q9H4P4 317 aaPredicted RBP17.47■□□□□ 0.39
TGFB1-201ENST00000221930 BTAF1O14981 1849 aa17.47■□□□□ 0.39
TGFB1-201ENST00000221930 RC3H1Q5TC82 1133 aaKnown RBP17.47■□□□□ 0.39
TGFB1-201ENST00000221930 CSRNP2Q9H175 543 aa17.47■□□□□ 0.39
TGFB1-201ENST00000221930 NFE2L3Q9Y4A8 694 aa17.47■□□□□ 0.39
TGFB1-201ENST00000221930 MAGEB6P1A0A0J9YX57 407 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 DYNLL1P63167 89 aaKnown RBP17.46■□□□□ 0.39
TGFB1-201ENST00000221930 EARS2Q5JPH6 523 aaKnown RBP17.46■□□□□ 0.39
TGFB1-201ENST00000221930 TMTC2Q8N394 836 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 TRIM34Q9BYJ4 488 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 DNAI1Q9UI46 699 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 COL4A1P02462 1669 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 FBXO38Q6PIJ6 1188 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 C3orf67Q6ZVT6 689 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 EFCC1Q9HA90 598 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 HOOK1Q9UJC3 728 aaKnown RBP17.46■□□□□ 0.39
TGFB1-201ENST00000221930 A0A1B0GUL6 1792 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 CASZ1Q86V15 1759 aa17.46■□□□□ 0.39
TGFB1-201ENST00000221930 NID2Q14112 1375 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms