RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 SLC3A2P08195 630 aaKnown RBP25.56■■□□□ 1.68
CCDC9-201ENST00000221922 PCP11498 1178 aaKnown RBP25.56■■□□□ 1.68
CCDC9-201ENST00000221922 NLRP12P59046 1061 aa25.56■■□□□ 1.68
CCDC9-201ENST00000221922 MECOMQ03112 1051 aa25.56■■□□□ 1.68
CCDC9-201ENST00000221922 SLC27A3Q5K4L6 730 aa25.56■■□□□ 1.68
CCDC9-201ENST00000221922 MYH6P13533 1939 aa25.55■■□□□ 1.68
CCDC9-201ENST00000221922 USP27XA6NNY8 438 aa25.55■■□□□ 1.68
CCDC9-201ENST00000221922 MINDY4BA8MYZ0 360 aa25.55■■□□□ 1.68
CCDC9-201ENST00000221922 PFKFB1P16118 471 aa25.55■■□□□ 1.68
CCDC9-201ENST00000221922 DYNLL1P63167 89 aaKnown RBP25.55■■□□□ 1.68
CCDC9-201ENST00000221922 ZKSCAN3Q9BRR0 538 aa25.55■■□□□ 1.68
CCDC9-201ENST00000221922 LEMD3Q9Y2U8 911 aa25.55■■□□□ 1.68
CCDC9-201ENST00000221922 BAZ2AQ9UIF9 1905 aaKnown RBP25.55■■□□□ 1.68
CCDC9-201ENST00000221922 DEXIO95424 95 aa25.54■■□□□ 1.68
CCDC9-201ENST00000221922 PTPAQ15257 358 aa25.54■■□□□ 1.68
CCDC9-201ENST00000221922 ZNF654Q8IZM8 581 aa25.54■■□□□ 1.68
CCDC9-201ENST00000221922 WDHD1O75717 1129 aaPredicted RBP25.54■■□□□ 1.68
CCDC9-201ENST00000221922 MAP3K14Q99558 947 aa25.54■■□□□ 1.68
CCDC9-201ENST00000221922 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.54■■□□□ 1.68
CCDC9-201ENST00000221922 MYH2Q9UKX2 1941 aa25.53■■□□□ 1.68
CCDC9-201ENST00000221922 LAMB1P07942 1786 aa25.53■■□□□ 1.68
CCDC9-201ENST00000221922 MARCKSP29966 332 aaPredicted RBP25.53■■□□□ 1.68
CCDC9-201ENST00000221922 PRR5LQ6MZQ0 368 aa25.53■■□□□ 1.68
CCDC9-201ENST00000221922 CCAR2Q8N163 923 aaKnown RBP25.53■■□□□ 1.68
CCDC9-201ENST00000221922 FANCBQ8NB91 859 aa25.53■■□□□ 1.68
CCDC9-201ENST00000221922 FBXW7Q969H0 707 aa25.53■■□□□ 1.68
CCDC9-201ENST00000221922 QTRT2Q9H974 415 aaKnown RBP25.53■■□□□ 1.68
CCDC9-201ENST00000221922 FAM237AA0A1B0GTK4 181 aa25.52■■□□□ 1.68
CCDC9-201ENST00000221922 MMP1P03956 469 aa25.52■■□□□ 1.68
CCDC9-201ENST00000221922 FGRP09769 529 aa25.52■■□□□ 1.68
CCDC9-201ENST00000221922 PTPN14Q15678 1187 aa25.52■■□□□ 1.68
CCDC9-201ENST00000221922 NOSTRINQ8IVI9 506 aa25.52■■□□□ 1.68
CCDC9-201ENST00000221922 CRACR2BQ8N4Y2 399 aaPredicted RBP25.52■■□□□ 1.68
CCDC9-201ENST00000221922 MROH7-TTC4A0A0A0MT08 1334 aa25.52■■□□□ 1.68
CCDC9-201ENST00000221922 TXNRD3Q86VQ6 643 aa25.52■■□□□ 1.68
CCDC9-201ENST00000221922 TNKSO95271 1327 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 XDHP47989 1333 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 CUTAO60888 179 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 GYS1P13807 737 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 SYKP43405 635 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 NCAPHQ15003 741 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 SEC23AQ15436 765 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 SPTY2D1Q68D10 685 aaPredicted RBP25.51■■□□□ 1.67
CCDC9-201ENST00000221922 FOXP1Q9H334 677 aaPredicted RBP25.51■■□□□ 1.67
CCDC9-201ENST00000221922 HPSEQ9Y251 543 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 DLEC1Q9Y238 1755 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 CRY2Q49AN0 593 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 STK11IPQ8N1F8 1099 aa25.51■■□□□ 1.67
CCDC9-201ENST00000221922 PRDX5P30044 214 aa25.5■■□□□ 1.67
CCDC9-201ENST00000221922 DHX8Q14562 1220 aaKnown RBP25.5■■□□□ 1.67
CCDC9-201ENST00000221922 C15orf52Q6ZUT6 534 aaKnown RBP25.5■■□□□ 1.67
CCDC9-201ENST00000221922 NUP133Q8WUM0 1156 aa25.5■■□□□ 1.67
CCDC9-201ENST00000221922 CRNKL1Q9BZJ0 848 aaKnown RBP25.5■■□□□ 1.67
CCDC9-201ENST00000221922 XPO4Q9C0E2 1151 aaKnown RBP25.5■■□□□ 1.67
CCDC9-201ENST00000221922 ANKIB1Q9P2G1 1089 aa25.5■■□□□ 1.67
CCDC9-201ENST00000221922 IKBKBO14920 756 aa25.49■■□□□ 1.67
CCDC9-201ENST00000221922 TPM4P67936 248 aa25.49■■□□□ 1.67
CCDC9-201ENST00000221922 RESP18Q5W5W9 173 aa25.49■■□□□ 1.67
CCDC9-201ENST00000221922 DIS3L2Q8IYB7 885 aaKnown RBP25.49■■□□□ 1.67
CCDC9-201ENST00000221922 TUBE1Q9UJT0 475 aa25.49■■□□□ 1.67
CCDC9-201ENST00000221922 CTR9Q6PD62 1173 aa25.49■■□□□ 1.67
CCDC9-201ENST00000221922 CCDC150Q8NCX0 1101 aa25.49■■□□□ 1.67
CCDC9-201ENST00000221922 ZSCAN10Q96SZ4 725 aaPredicted RBP25.49■■□□□ 1.67
CCDC9-201ENST00000221922 RNF26Q9BY78 433 aaPredicted RBP25.49■■□□□ 1.67
CCDC9-201ENST00000221922 ATP8A2Q9NTI2 1148 aa25.49■■□□□ 1.67
CCDC9-201ENST00000221922 IFNKQ9P0W0 207 aa25.49■■□□□ 1.67
CCDC9-201ENST00000221922 TAOK2Q9UL54 1235 aa25.49■■□□□ 1.67
CCDC9-201ENST00000221922 GUCY1A2P33402 732 aa25.48■■□□□ 1.67
CCDC9-201ENST00000221922 RILPL1Q5EBL4 403 aa25.48■■□□□ 1.67
CCDC9-201ENST00000221922 SHC4Q6S5L8 630 aa25.48■■□□□ 1.67
CCDC9-201ENST00000221922 IQCA1Q86XH1 822 aa25.48■■□□□ 1.67
CCDC9-201ENST00000221922 RPGRQ92834 1020 aaKnown RBP25.48■■□□□ 1.67
CCDC9-201ENST00000221922 BIN1O00499 593 aa25.48■■□□□ 1.67
CCDC9-201ENST00000221922 ST5P78524 1137 aa25.48■■□□□ 1.67
CCDC9-201ENST00000221922 WDR66Q8TBY9 1149 aa25.48■■□□□ 1.67
CCDC9-201ENST00000221922 FEZ1Q99689 392 aa25.48■■□□□ 1.67
CCDC9-201ENST00000221922 BTBD18B2RXH4 712 aa25.47■■□□□ 1.67
CCDC9-201ENST00000221922 UBE2Q2LH0YL09 131 aa25.47■■□□□ 1.67
CCDC9-201ENST00000221922 KIF2AO00139 706 aaPredicted RBP25.47■■□□□ 1.67
CCDC9-201ENST00000221922 KCNJ6P48051 423 aa25.47■■□□□ 1.67
CCDC9-201ENST00000221922 KRT27Q7Z3Y8 459 aa25.47■■□□□ 1.67
CCDC9-201ENST00000221922 ZNF592Q92610 1267 aa25.47■■□□□ 1.67
CCDC9-201ENST00000221922 AATFQ9NY61 560 aaKnown RBP eCLIP25.47■■□□□ 1.673e-9■□□□□ 9.9
CCDC9-201ENST00000221922 SMC2O95347 1197 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 XBP1P17861 261 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 CBX1P83916 185 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 AKAP17AQ02040 695 aaKnown RBP25.46■■□□□ 1.67
CCDC9-201ENST00000221922 CATIPQ7Z7H3 387 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 KRI1Q8N9T8 703 aaKnown RBP25.46■■□□□ 1.67
CCDC9-201ENST00000221922 DCP1AQ9NPI6 582 aaPredicted RBP25.46■■□□□ 1.67
CCDC9-201ENST00000221922 RBM28Q9NW13 759 aaKnown RBP25.46■■□□□ 1.67
CCDC9-201ENST00000221922 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.46■■□□□ 1.67
CCDC9-201ENST00000221922 CYP2D7A0A087X1C5 515 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 USP17L12C9JPN9 530 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 USP17L21D6R901 530 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 SMIM22K7EJ46 135 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 SERPINB2P05120 415 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 CALM1P0DP23 149 aa25.46■■□□□ 1.67
CCDC9-201ENST00000221922 CALM2P0DP24 149 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms