RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 NAPAP54920 295 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 ZNF569Q5MCW4 686 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 COL15A1P39059 1388 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 FMNL1O95466 1100 aaPredicted RBP11.07□□□□□ -0.64
CSTF1-201ENST00000217109 TRIM21P19474 475 aaKnown RBP11.07□□□□□ -0.64
CSTF1-201ENST00000217109 CASP1P29466 404 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 EVCP57679 992 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 FAM193AP78312 1265 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 TFAP4Q01664 338 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 PICALMQ13492 652 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 FAM182BQ5T319 152 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 SPECC1LQ69YQ0 1117 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 SARM1Q6SZW1 724 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 IL17RAQ96F46 866 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 CTAGE1Q96RT6 745 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 OGFRQ9NZT2 677 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 MMP1P03956 469 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 LDHCP07864 332 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 UBXN1Q04323 297 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 MCM6Q14566 821 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 DTHD1Q6ZMT9 781 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 AK7Q96M32 723 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 FEZ1Q99689 392 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 LY9Q9HBG7 655 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 RBM28Q9NW13 759 aaKnown RBP11.07□□□□□ -0.64
CSTF1-201ENST00000217109 PIK3C2AO00443 1686 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 ARHGAP6O43182 974 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 ERLIN1O75477 346 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 CALML3P27482 149 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 LIFRP42702 1097 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 ETF1P62495 437 aaKnown RBP11.06□□□□□ -0.64
CSTF1-201ENST00000217109 CCDC96Q2M329 555 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 LETM2Q2VYF4 491 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 GPIHBP1Q8IV16 184 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 EPSTI1Q96J88 318 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 PPP1R13BQ96KQ4 1090 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 HPS5Q9UPZ3 1129 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
CSTF1-201ENST00000217109 TCHHQ07283 1943 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 CCDC66A2RUB6 948 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 CSF1RP07333 972 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 ERCC3P19447 782 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 ASIC1P78348 528 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 PTGDRQ13258 359 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 ERFEQ4G0M1 354 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 SHC4Q6S5L8 630 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 CRACR2BQ8N4Y2 399 aaPredicted RBP11.06□□□□□ -0.64
CSTF1-201ENST00000217109 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 SYNRGQ9UMZ2 1314 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 GSG1L2A8MUP6 293 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 SAMSN1Q9NSI8 373 aaKnown RBP11.06□□□□□ -0.64
CSTF1-201ENST00000217109 TAB2Q9NYJ8 693 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
CSTF1-201ENST00000217109 GUCA1BQ9UMX6 200 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 AKAP12Q02952 1782 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 RGPD8O14715 1765 aaPredicted RBP11.06□□□□□ -0.64
CSTF1-201ENST00000217109 ERVV-1B6SEH8 477 aa11.06□□□□□ -0.64
CSTF1-201ENST00000217109 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
CSTF1-201ENST00000217109 GPKOWQ92917 476 aaPredicted RBP eCLIP11.06□□□□□ -0.64
CSTF1-201ENST00000217109 TMEM232C9JQI7 657 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 GTF2F1P35269 517 aaKnown RBP eCLIP11.05□□□□□ -0.64
CSTF1-201ENST00000217109 ENGASEQ8NFI3 743 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 UIMC1Q96RL1 719 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 ARFGAP3Q9NP61 516 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 RMND1Q9NWS8 449 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 SOS2Q07890 1332 aaPredicted RBP11.05□□□□□ -0.64
CSTF1-201ENST00000217109 EIF6P56537 245 aaKnown RBP11.05□□□□□ -0.64
CSTF1-201ENST00000217109 MAPKAPK5Q8IW41 473 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 NYXQ9GZU5 481 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 ACBD3Q9H3P7 528 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 BMP2KQ9NSY1 1161 aaPredicted RBP11.05□□□□□ -0.64
CSTF1-201ENST00000217109 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.05□□□□□ -0.643e-7■■■□□ 14.7
CSTF1-201ENST00000217109 PSMA7O14818 248 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 NCBP1Q09161 790 aaKnown RBP11.05□□□□□ -0.64
CSTF1-201ENST00000217109 FKBP15Q5T1M5 1219 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 SMAP1Q8IYB5 467 aaPredicted RBP11.05□□□□□ -0.64
CSTF1-201ENST00000217109 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 MAN1B1Q9UKM7 699 aa11.05□□□□□ -0.64
CSTF1-201ENST00000217109 IKBKBO14920 756 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 RHOXF2BP0C7M4 288 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 GNAQP50148 359 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 CCDC148Q8NFR7 591 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 TGFBRAP1Q8WUH2 860 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 CALML4Q96GE6 196 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 TIGD1Q96MW7 591 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 RHOXF2Q9BQY4 288 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 FOXP1Q9H334 677 aaPredicted RBP11.04□□□□□ -0.64
CSTF1-201ENST00000217109 EXOC1Q9NV70 894 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 GOLGA8HP0CJ92 632 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 SPAG1Q07617 926 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 SPA17Q15506 151 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 AXDND1Q5T1B0 1012 aaPredicted RBP11.04□□□□□ -0.64
CSTF1-201ENST00000217109 CCDC181Q5TID7 509 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 DRC1Q96MC2 740 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 PPP2R2CQ9Y2T4 447 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 ANKRD2Q9GZV1 360 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms