RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
SRP54-201ENST00000216774 TOMM22Q9NS69 142 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 PARP3Q9Y6F1 533 aa15.22■□□□□ 0.03
SRP54-201ENST00000216774 SLIT2O94813 1529 aa15.21■□□□□ 0.03
SRP54-201ENST00000216774 RTL9Q8NET4 1388 aa15.21■□□□□ 0.03
SRP54-201ENST00000216774 EFCAB8A8MWE9 144 aa15.21■□□□□ 0.03
SRP54-201ENST00000216774 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
SRP54-201ENST00000216774 PLCD1P51178 756 aa15.21■□□□□ 0.03
SRP54-201ENST00000216774 NR5A1Q13285 461 aa15.21■□□□□ 0.03
SRP54-201ENST00000216774 MNS1Q8NEH6 495 aa15.21■□□□□ 0.03
SRP54-201ENST00000216774 UBAC1Q9BSL1 405 aa15.21■□□□□ 0.03
SRP54-201ENST00000216774 ARGLU1Q9NWB6 273 aaPredicted RBP15.21■□□□□ 0.03
SRP54-201ENST00000216774 NPHP1O15259 732 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 TADA3O75528 432 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 TERF2Q15554 542 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 TC2NQ8N9U0 490 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 ZKSCAN3Q9BRR0 538 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 ANAPC4Q9UJX5 808 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 FANCGO15287 622 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 URI1O94763 535 aaPredicted RBP15.2■□□□□ 0.02
SRP54-201ENST00000216774 XBP1P17861 261 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 CLCN6P51797 869 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 PPARAQ07869 468 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 ZNF771Q7L3S4 317 aaPredicted RBP15.2■□□□□ 0.02
SRP54-201ENST00000216774 CREBRFQ8IUR6 639 aa15.2■□□□□ 0.02
SRP54-201ENST00000216774 AATFQ9NY61 560 aaKnown RBP eCLIP15.2■□□□□ 0.02
SRP54-201ENST00000216774 GOLGA8FQ08AF8 430 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 GOLGA8DPQ0D2H9 430 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 CCDC152Q4G0S7 254 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 SUSD4Q5VX71 490 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 ESR2Q92731 530 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 CSRNP2Q9H175 543 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 RAI14Q9P0K7 980 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 A0A1B0GTH6 734 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 TRIM75PA6NK02 468 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 BMP15O95972 392 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 BCAMP50895 628 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 NR1I3Q14994 352 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 SEC23AQ15436 765 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 PDILTQ8N807 584 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 OXER1Q8TDS5 423 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 NUP133Q8WUM0 1156 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 CABP5Q9NP86 173 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 LRP2BPQ9P2M1 347 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 FHOD1Q9Y613 1164 aa15.19■□□□□ 0.02
SRP54-201ENST00000216774 SNAP23O00161 211 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 IGHMBP2P38935 993 aaKnown RBP15.18■□□□□ 0.02
SRP54-201ENST00000216774 EIF5P55010 431 aaKnown RBP15.18■□□□□ 0.02
SRP54-201ENST00000216774 AKAP17AQ02040 695 aaKnown RBP15.18■□□□□ 0.02
SRP54-201ENST00000216774 PARP10Q53GL7 1025 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 CCDC82Q8N4S0 544 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 BTG4Q9NY30 223 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 IGSF3O75054 1194 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 CASQ1P31415 396 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 ZNF827Q17R98 1081 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
SRP54-201ENST00000216774 GRAMD1CQ8IYS0 662 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 PANX2Q96RD6 677 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 MED15Q96RN5 788 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 SEC31BQ9NQW1 1179 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 TNKSO95271 1327 aa15.18■□□□□ 0.02
SRP54-201ENST00000216774 ZRANB2O95218 330 aaKnown RBP eCLIP15.17■□□□□ 0.02
SRP54-201ENST00000216774 MAP3K9P80192 1104 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 PTPN21Q16825 1174 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 HSP90AA4PQ58FG1 418 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 TMCO3Q6UWJ1 677 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 CMTR1Q8N1G2 835 aaKnown RBP15.17■□□□□ 0.02
SRP54-201ENST00000216774 MIGA1Q8NAN2 632 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 FERMT2Q96AC1 680 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 PHF20Q9BVI0 1012 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 CARD6Q9BX69 1037 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 COL22A1Q8NFW1 1626 aaPredicted RBP15.17■□□□□ 0.02
SRP54-201ENST00000216774 PRPF3O43395 683 aaKnown RBP15.17■□□□□ 0.02
SRP54-201ENST00000216774 ATP8B1O43520 1251 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 PNMA6AP0CW24 399 aaPredicted RBP15.17■□□□□ 0.02
SRP54-201ENST00000216774 KRT2P35908 639 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
SRP54-201ENST00000216774 GNG11P61952 73 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 SPATA1Q5VX52 437 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 TOGARAM2Q6ZUX3 1019 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 SH3RF1Q7Z6J0 888 aa15.17■□□□□ 0.02
SRP54-201ENST00000216774 NAA15Q9BXJ9 866 aaKnown RBP15.17■□□□□ 0.02
SRP54-201ENST00000216774 SAMSN1Q9NSI8 373 aaKnown RBP15.17■□□□□ 0.02
SRP54-201ENST00000216774 BCL9LQ86UU0 1499 aa15.16■□□□□ 0.02
SRP54-201ENST00000216774 SEMA3EO15041 775 aa15.16■□□□□ 0.02
SRP54-201ENST00000216774 CYP7A1P22680 504 aa15.16■□□□□ 0.02
SRP54-201ENST00000216774 FUT2Q10981 343 aa15.16■□□□□ 0.02
SRP54-201ENST00000216774 TAF3Q5VWG9 929 aa15.16■□□□□ 0.02
SRP54-201ENST00000216774 USP49Q70CQ1 688 aa15.16■□□□□ 0.02
SRP54-201ENST00000216774 GSDMAQ96QA5 445 aa15.16■□□□□ 0.02
SRP54-201ENST00000216774 RBM28Q9NW13 759 aaKnown RBP15.16■□□□□ 0.02
SRP54-201ENST00000216774 MRFAP1Q9Y605 127 aa15.16■□□□□ 0.02
SRP54-201ENST00000216774 LAMB2P55268 1798 aa15.16■□□□□ 0.02
SRP54-201ENST00000216774 MAGEB6P1A0A0J9YX57 407 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 AKR1B15C9JRZ8 316 aaPredicted RBP15.15■□□□□ 0.02
SRP54-201ENST00000216774 PCP11498 1178 aaKnown RBP15.15■□□□□ 0.02
SRP54-201ENST00000216774 ATP2B1P20020 1258 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 HSPA2P54652 639 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 PKN1Q16512 942 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms