RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 GPR75-ASB3A0A0A6YYF3 556 aa34.38■■■■□ 3.09
PABPN1-201ENST00000216727 PDE6BP35913 854 aa34.37■■■■□ 3.09
PABPN1-201ENST00000216727 SAFBQ15424 915 aaKnown RBP eCLIP34.37■■■■□ 3.09
PABPN1-201ENST00000216727 MFSD14BQ5SR56 506 aa34.37■■■■□ 3.09
PABPN1-201ENST00000216727 SLF2Q8IX21 1173 aa34.37■■■■□ 3.09
PABPN1-201ENST00000216727 AMOTL1Q8IY63 956 aa34.37■■■■□ 3.09
PABPN1-201ENST00000216727 FAM200AQ8TCP9 573 aa34.37■■■■□ 3.09
PABPN1-201ENST00000216727 KINO60870 393 aaKnown RBP34.36■■■■□ 3.09
PABPN1-201ENST00000216727 ALDH1B1P30837 517 aa34.36■■■■□ 3.09
PABPN1-201ENST00000216727 FUT2Q10981 343 aa34.36■■■■□ 3.09
PABPN1-201ENST00000216727 CMTR1Q8N1G2 835 aaKnown RBP34.36■■■■□ 3.09
PABPN1-201ENST00000216727 FMR1NBQ8N0W7 255 aaPredicted RBP34.35■■■■□ 3.09
PABPN1-201ENST00000216727 FOXP1Q9H334 677 aaPredicted RBP34.35■■■■□ 3.09
PABPN1-201ENST00000216727 PARP3Q9Y6F1 533 aa34.35■■■■□ 3.09
PABPN1-201ENST00000216727 MMP10P09238 476 aa34.35■■■■□ 3.09
PABPN1-201ENST00000216727 PLCG2P16885 1265 aa34.35■■■■□ 3.09
PABPN1-201ENST00000216727 FAM47AQ5JRC9 791 aa34.35■■■■□ 3.09
PABPN1-201ENST00000216727 SASS6Q6UVJ0 657 aa34.35■■■■□ 3.09
PABPN1-201ENST00000216727 NOSTRINQ8IVI9 506 aa34.35■■■■□ 3.09
PABPN1-201ENST00000216727 CCDC82Q8N4S0 544 aa34.35■■■■□ 3.09
PABPN1-201ENST00000216727 COA1Q9GZY4 146 aa34.35■■■■□ 3.09
PABPN1-201ENST00000216727 RGPD3A6NKT7 1758 aaPredicted RBP34.35■■■■□ 3.09
PABPN1-201ENST00000216727 RGPD4Q7Z3J3 1758 aa34.35■■■■□ 3.09
PABPN1-201ENST00000216727 TSPY2A6NKD2 308 aa34.34■■■■□ 3.09
PABPN1-201ENST00000216727 BTDP43251 543 aa34.34■■■■□ 3.09
PABPN1-201ENST00000216727 TGFBRAP1Q8WUH2 860 aa34.34■■■■□ 3.09
PABPN1-201ENST00000216727 NAV1Q8NEY1 1877 aa34.34■■■■□ 3.09
PABPN1-201ENST00000216727 PRPF3O43395 683 aaKnown RBP34.33■■■■□ 3.09
PABPN1-201ENST00000216727 PPP6R2O75170 966 aa34.33■■■■□ 3.09
PABPN1-201ENST00000216727 AXDND1Q5T1B0 1012 aaPredicted RBP34.33■■■■□ 3.09
PABPN1-201ENST00000216727 MAP3K14Q99558 947 aa34.33■■■■□ 3.09
PABPN1-201ENST00000216727 GAKO14976 1311 aa34.33■■■■□ 3.09
PABPN1-201ENST00000216727 AKAP17AQ02040 695 aaKnown RBP34.33■■■■□ 3.09
PABPN1-201ENST00000216727 DIS3L2Q8IYB7 885 aaKnown RBP34.33■■■■□ 3.09
PABPN1-201ENST00000216727 TNS1Q9HBL0 1735 aaKnown RBP34.32■■■■□ 3.08
PABPN1-201ENST00000216727 CAVIN2O95810 425 aa34.32■■■■□ 3.08
PABPN1-201ENST00000216727 PTPAQ15257 358 aa34.32■■■■□ 3.08
PABPN1-201ENST00000216727 JMYQ8N9B5 988 aa34.32■■■■□ 3.08
PABPN1-201ENST00000216727 NMT2O60551 498 aa34.31■■■■□ 3.08
PABPN1-201ENST00000216727 USP25Q9UHP3 1055 aa34.31■■■■□ 3.08
PABPN1-201ENST00000216727 MYH6P13533 1939 aa34.31■■■■□ 3.08
PABPN1-201ENST00000216727 BTBD18B2RXH4 712 aa34.31■■■■□ 3.08
PABPN1-201ENST00000216727 CMA1P23946 247 aa34.31■■■■□ 3.08
PABPN1-201ENST00000216727 TMTC3Q6ZXV5 915 aa34.31■■■■□ 3.08
PABPN1-201ENST00000216727 MASTLQ96GX5 879 aa34.31■■■■□ 3.08
PABPN1-201ENST00000216727 SUGT1Q9Y2Z0 365 aa34.31■■■■□ 3.08
PABPN1-201ENST00000216727 RCSD1Q6JBY9 416 aa34.3■■■■□ 3.08
PABPN1-201ENST00000216727 DGKHQ86XP1 1220 aa34.3■■■■□ 3.08
PABPN1-201ENST00000216727 MPNDQ8N594 471 aa34.3■■■■□ 3.08
PABPN1-201ENST00000216727 ANKS1AQ92625 1134 aa34.3■■■■□ 3.08
PABPN1-201ENST00000216727 EIF4ENIF1Q9NRA8 985 aaKnown RBP34.3■■■■□ 3.08
PABPN1-201ENST00000216727 KCNJ14Q9UNX9 436 aa34.3■■■■□ 3.08
PABPN1-201ENST00000216727 XBP1P17861 261 aa34.3■■■■□ 3.08
PABPN1-201ENST00000216727 PKN1Q16512 942 aa34.3■■■■□ 3.08
PABPN1-201ENST00000216727 CCDC178Q5BJE1 867 aa34.3■■■■□ 3.08
PABPN1-201ENST00000216727 CTCFLQ8NI51 663 aaPredicted RBP34.3■■■■□ 3.08
PABPN1-201ENST00000216727 CDK5RAP2Q96SN8 1893 aa34.29■■■■□ 3.08
PABPN1-201ENST00000216727 A0A1B0GVL5 298 aa34.29■■■■□ 3.08
PABPN1-201ENST00000216727 TFAP4Q01664 338 aa34.29■■■■□ 3.08
PABPN1-201ENST00000216727 ANO6Q4KMQ2 910 aa34.29■■■■□ 3.08
PABPN1-201ENST00000216727 ZSCAN30Q86W11 494 aa34.29■■■■□ 3.08
PABPN1-201ENST00000216727 TAOK2Q9UL54 1235 aa34.29■■■■□ 3.08
PABPN1-201ENST00000216727 COL11A2P13942 1736 aaPredicted RBP34.28■■■■□ 3.08
PABPN1-201ENST00000216727 PLEKHA8P1O95397 391 aa34.28■■■■□ 3.08
PABPN1-201ENST00000216727 NDUFA8P51970 172 aa34.28■■■■□ 3.08
PABPN1-201ENST00000216727 MAPKAPK5Q8IW41 473 aa34.28■■■■□ 3.08
PABPN1-201ENST00000216727 DYNLL2Q96FJ2 89 aa34.28■■■■□ 3.08
PABPN1-201ENST00000216727 ZC3H12CQ9C0D7 883 aaKnown RBP34.28■■■■□ 3.08
PABPN1-201ENST00000216727 MKNK2Q9HBH9 465 aa34.28■■■■□ 3.08
PABPN1-201ENST00000216727 TCP11L1Q9NUJ3 509 aa34.28■■■■□ 3.08
PABPN1-201ENST00000216727 RHBDL3P58872 404 aa34.27■■■■□ 3.08
PABPN1-201ENST00000216727 TEX11Q8IYF3 940 aa34.27■■■■□ 3.08
PABPN1-201ENST00000216727 ZNF287Q9HBT7 754 aa34.27■■■■□ 3.08
PABPN1-201ENST00000216727 DDX60LQ5H9U9 1706 aaKnown RBP34.27■■■■□ 3.08
PABPN1-201ENST00000216727 WDHD1O75717 1129 aaPredicted RBP34.26■■■■□ 3.08
PABPN1-201ENST00000216727 CLCN1P35523 988 aa34.26■■■■□ 3.08
PABPN1-201ENST00000216727 GTF2IP78347 998 aa34.26■■■■□ 3.08
PABPN1-201ENST00000216727 RILPL1Q5EBL4 403 aa34.26■■■■□ 3.08
PABPN1-201ENST00000216727 CCDC39Q9UFE4 941 aa34.26■■■■□ 3.08
PABPN1-201ENST00000216727 IL17RBQ9NRM6 502 aa34.26■■■■□ 3.07
PABPN1-201ENST00000216727 V9GY48 417 aaPredicted RBP34.26■■■■□ 3.07
PABPN1-201ENST00000216727 RIMBP2O15034 1052 aa34.25■■■■□ 3.07
PABPN1-201ENST00000216727 PLCD1P51178 756 aa34.25■■■■□ 3.07
PABPN1-201ENST00000216727 SLC4A8Q2Y0W8 1093 aa34.25■■■■□ 3.07
PABPN1-201ENST00000216727 DPP8Q6V1X1 898 aaPredicted RBP34.25■■■■□ 3.07
PABPN1-201ENST00000216727 ADCY5O95622 1261 aa34.25■■■■□ 3.07
PABPN1-201ENST00000216727 MARCKSP29966 332 aaPredicted RBP34.25■■■■□ 3.07
PABPN1-201ENST00000216727 TMX4Q9H1E5 349 aaPredicted RBP34.25■■■■□ 3.07
PABPN1-201ENST00000216727 CNTNAP5Q8WYK1 1306 aa34.24■■■■□ 3.07
PABPN1-201ENST00000216727 PHF20Q9BVI0 1012 aa34.24■■■■□ 3.07
PABPN1-201ENST00000216727 KAT14Q9H8E8 782 aa34.24■■■■□ 3.07
PABPN1-201ENST00000216727 CBX8Q9HC52 389 aa34.24■■■■□ 3.07
PABPN1-201ENST00000216727 FLT1P17948 1338 aa34.24■■■■□ 3.07
PABPN1-201ENST00000216727 KIF5BP33176 963 aa34.23■■■■□ 3.07
PABPN1-201ENST00000216727 ZNF444Q8N0Y2 327 aaPredicted RBP34.23■■■■□ 3.07
PABPN1-201ENST00000216727 NOL7Q9UMY1 257 aaKnown RBP34.23■■■■□ 3.07
PABPN1-201ENST00000216727 FAM237AA0A1B0GTK4 181 aa34.23■■■■□ 3.07
PABPN1-201ENST00000216727 TOB1P50616 345 aaPredicted RBP34.23■■■■□ 3.07
PABPN1-201ENST00000216727 SRBD1Q8N5C6 995 aaKnown RBP34.23■■■■□ 3.07
PABPN1-201ENST00000216727 STX1AQ16623 288 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 1413.7 ms