RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.08■■□□□ 1.45
SYNGR1-201ENST00000216155 CCDC8Q9H0W5 538 aaPredicted RBP24.08■■□□□ 1.45
SYNGR1-201ENST00000216155 MORF4L1Q9UBU8 362 aa24.08■■□□□ 1.45
SYNGR1-201ENST00000216155 SAP30BPQ9UHR5 308 aaKnown RBP24.08■■□□□ 1.45
SYNGR1-201ENST00000216155 GJD2Q9UKL4 321 aa24.08■■□□□ 1.45
SYNGR1-201ENST00000216155 ZBTB7BO15156 539 aaPredicted RBP24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 TFRCP02786 760 aaKnown RBP24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 HMGCRP04035 888 aa24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 DYNLL1P63167 89 aaKnown RBP24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 IRX3P78415 501 aaPredicted RBP24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 FOXP4Q8IVH2 680 aaPredicted RBP24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 EAF2Q96CJ1 260 aaPredicted RBP24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 TRIM34Q9BYJ4 488 aa24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 PRO3102Q9H379 93 aa24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 TMOD4Q9NZQ9 345 aa24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 ZBTB21Q9ULJ3 1066 aa24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 ALPK3Q96L96 1907 aa24.07■■□□□ 1.44
SYNGR1-201ENST00000216155 MYH1P12882 1939 aa24.06■■□□□ 1.44
SYNGR1-201ENST00000216155 CYP7A1P22680 504 aa24.06■■□□□ 1.44
SYNGR1-201ENST00000216155 HOXA7P31268 230 aaPredicted RBP24.06■■□□□ 1.44
SYNGR1-201ENST00000216155 HNRNPUQ00839 825 aaKnown RBP eCLIP24.06■■□□□ 1.44
SYNGR1-201ENST00000216155 NR2E3Q9Y5X4 410 aa24.06■■□□□ 1.44
SYNGR1-201ENST00000216155 LAMA3Q16787 3333 aa24.05■■□□□ 1.44
SYNGR1-201ENST00000216155 PEX10O60683 326 aa24.05■■□□□ 1.44
SYNGR1-201ENST00000216155 HLA-DOAP06340 250 aa24.05■■□□□ 1.44
SYNGR1-201ENST00000216155 CAPN2P17655 700 aa24.05■■□□□ 1.44
SYNGR1-201ENST00000216155 TXNRD2Q9NNW7 524 aa24.05■■□□□ 1.44
SYNGR1-201ENST00000216155 GINM1Q9NU53 330 aa24.05■■□□□ 1.44
SYNGR1-201ENST00000216155 NDUFB9Q9Y6M9 179 aa24.05■■□□□ 1.44
SYNGR1-201ENST00000216155 C19orf81C9J6K1 198 aa24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 USP17L10C9JJH3 530 aa24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 IDH1O75874 414 aaKnown RBP24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 HERVK_113P62684 666 aa24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 TRIM32Q13049 653 aa24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 CEP85Q6P2H3 762 aa24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 MIGA1Q8NAN2 632 aa24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 DIS3LQ8TF46 1054 aaKnown RBP24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 P2RX7Q99572 595 aaKnown RBP24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 DDX60LQ5H9U9 1706 aaKnown RBP24.04■■□□□ 1.44
SYNGR1-201ENST00000216155 TRIB2Q92519 343 aa24.03■■□□□ 1.44
SYNGR1-201ENST00000216155 PAWRQ96IZ0 340 aaKnown RBP24.03■■□□□ 1.44
SYNGR1-201ENST00000216155 EVI5O60447 810 aa24.02■■□□□ 1.44
SYNGR1-201ENST00000216155 MAGEB6Q8N7X4 407 aa24.02■■□□□ 1.44
SYNGR1-201ENST00000216155 ANTXR1Q9H6X2 564 aa24.02■■□□□ 1.44
SYNGR1-201ENST00000216155 GPRC5AQ8NFJ5 357 aa24.01■■□□□ 1.43
SYNGR1-201ENST00000216155 EMILIN3Q9NT22 766 aa24.01■■□□□ 1.43
SYNGR1-201ENST00000216155 EXOC6BQ9Y2D4 811 aa24.01■■□□□ 1.43
SYNGR1-201ENST00000216155 RPTORQ8N122 1335 aa24.01■■□□□ 1.43
SYNGR1-201ENST00000216155 GH2P01242 217 aa24■■□□□ 1.43
SYNGR1-201ENST00000216155 CYP2B6P20813 491 aa24■■□□□ 1.43
SYNGR1-201ENST00000216155 USP5P45974 858 aa24■■□□□ 1.43
SYNGR1-201ENST00000216155 NECAB2Q7Z6G3 386 aa24■■□□□ 1.43
SYNGR1-201ENST00000216155 CERS3Q8IU89 383 aa24■■□□□ 1.43
SYNGR1-201ENST00000216155 SOCS4Q8WXH5 440 aa24■■□□□ 1.43
SYNGR1-201ENST00000216155 HMX1Q9NP08 348 aaPredicted RBP24■■□□□ 1.43
SYNGR1-201ENST00000216155 TATDN1Q6P1N9 297 aa23.99■■□□□ 1.43
SYNGR1-201ENST00000216155 POTEEQ6S8J3 1075 aa23.99■■□□□ 1.43
SYNGR1-201ENST00000216155 AACSQ86V21 672 aa23.99■■□□□ 1.43
SYNGR1-201ENST00000216155 ANKLE1Q8NAG6 615 aa23.99■■□□□ 1.43
SYNGR1-201ENST00000216155 EHD4Q9H223 541 aa23.99■■□□□ 1.43
SYNGR1-201ENST00000216155 RBPJLQ9UBG7 517 aa23.99■■□□□ 1.43
SYNGR1-201ENST00000216155 NAV1Q8NEY1 1877 aa23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 ERVK-9P63128 1117 aa23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 ERVK-24P63145 666 aa23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 MAP3K21Q5TCX8 1036 aa23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 USP17L2Q6R6M4 530 aa23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 ERC1Q8IUD2 1116 aa23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 GTF3C2Q8WUA4 911 aaPredicted RBP23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 NUDT12Q9BQG2 462 aa23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 PORCNQ9H237 461 aa23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 SERPINB13Q9UIV8 391 aa23.98■■□□□ 1.43
SYNGR1-201ENST00000216155 MNX1P50219 401 aaPredicted RBP23.97■■□□□ 1.43
SYNGR1-201ENST00000216155 MAP3K12Q12852 859 aa23.97■■□□□ 1.43
SYNGR1-201ENST00000216155 Q3C1V9 767 aa23.97■■□□□ 1.43
SYNGR1-201ENST00000216155 PANK1Q8TE04 598 aa23.97■■□□□ 1.43
SYNGR1-201ENST00000216155 C12orf42Q96LP6 360 aa23.97■■□□□ 1.43
SYNGR1-201ENST00000216155 PAGR1Q9BTK6 254 aa23.97■■□□□ 1.43
SYNGR1-201ENST00000216155 XRCC5P13010 732 aaKnown RBP23.96■■□□□ 1.43
SYNGR1-201ENST00000216155 PRKAR2AP13861 404 aaKnown RBP23.96■■□□□ 1.43
SYNGR1-201ENST00000216155 MAPK4P31152 587 aa23.96■■□□□ 1.43
SYNGR1-201ENST00000216155 ZYXQ15942 572 aaKnown RBP23.96■■□□□ 1.43
SYNGR1-201ENST00000216155 FEZ1Q99689 392 aa23.96■■□□□ 1.43
SYNGR1-201ENST00000216155 RIOK1Q9BRS2 568 aaKnown RBP23.96■■□□□ 1.43
SYNGR1-201ENST00000216155 PDE3AQ14432 1141 aa23.95■■□□□ 1.42
SYNGR1-201ENST00000216155 TMED8Q6PL24 325 aaPredicted RBP23.95■■□□□ 1.42
SYNGR1-201ENST00000216155 GPR142Q7Z601 462 aa23.95■■□□□ 1.42
SYNGR1-201ENST00000216155 MIER1Q8N108 512 aa23.95■■□□□ 1.42
SYNGR1-201ENST00000216155 USP6NLQ92738 828 aa23.95■■□□□ 1.42
SYNGR1-201ENST00000216155 IL1RAPL2Q9NP60 686 aa23.95■■□□□ 1.42
SYNGR1-201ENST00000216155 OGDHLQ9ULD0 1010 aa23.95■■□□□ 1.42
SYNGR1-201ENST00000216155 ZBED9Q6R2W3 1325 aa23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 A0A1W2PPC1 479 aa23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 CNMDO75829 334 aa23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 ZKSCAN1P17029 563 aaPredicted RBP23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 SHMT1P34896 483 aa23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 PLCD1P51178 756 aa23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 RAB3GAP1Q15042 981 aa23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 CERKLQ49MI3 558 aaPredicted RBP23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 MORN1Q5T089 497 aa23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 TTC6Q86TZ1 520 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms