RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 IFFO2Q5TF58 517 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 ATL3Q6DD88 541 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 TBC1D10CQ8IV04 446 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 TMEM87BQ96K49 555 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 RBSNQ9H1K0 784 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 CAPN10Q9HC96 672 aa12.34□□□□□ -0.43
APOBEC3D-201ENST00000216099 TPM2P07951 284 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 CAVIN4Q5BKX8 364 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 BICDL1Q6ZP65 573 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 IFNL3Q8IZI9 196 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 TSPY26PQ9H489 355 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 EPB41L4AQ9HCS5 686 aaPredicted RBP12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 DENND2AQ9ULE3 1009 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 LRRC37AA6NMS7 1700 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 APPP05067 770 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 PPP1R18Q6NYC8 613 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 CHST3Q7LGC8 479 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 TTC6Q86TZ1 520 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 FERMT3Q86UX7 667 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 EPS8L1Q8TE68 723 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 ANP32BQ92688 251 aaKnown RBP12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 CELF1Q92879 486 aaKnown RBP12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 MTA3Q9BTC8 594 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 NACAP1Q9BZK3 213 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 MAF1Q9H063 256 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 CNNM2Q9H8M5 875 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 HPS5Q9UPZ3 1129 aa12.33□□□□□ -0.44
APOBEC3D-201ENST00000216099 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 KLF18A0A0U1RQI7 1052 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 SH2B2O14492 632 aaPredicted RBP12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 DTNBO60941 627 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 USP17L8P0C7I0 530 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 HSPA1LP34931 641 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 RHBDL3P58872 404 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 SEPT12Q8IYM1 358 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 DDX11Q96FC9 970 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 NAPBQ9H115 298 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 ANGEL1Q9UNK9 670 aaKnown RBP12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 NID2Q14112 1375 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 TRAPPC3LQ5T215 181 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 ARMT1Q9H993 441 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 PCDH12Q9NPG4 1184 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
APOBEC3D-201ENST00000216099 GOLGA8BA8MQT2 603 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 ESPNB1AK53 854 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 PTMAP06454 111 aaKnown RBP12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 RFC4P35249 363 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 MTMR3Q13615 1198 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 CYB5R4Q7L1T6 521 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 LEO1Q8WVC0 666 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 FAM84BQ96KN1 310 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 KRT23Q9C075 422 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 NCOA5Q9HCD5 579 aaKnown RBP12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 CFAP45Q9UL16 551 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 HMGB2P26583 209 aaKnown RBP12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 TM4SF1P30408 202 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 GYG1P46976 350 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 TMEM259Q4ZIN3 620 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 SGMS1Q86VZ5 419 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 AMIGO3Q86WK7 504 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 LCORLQ8N3X6 602 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 RPS6KC1Q96S38 1066 aa12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
APOBEC3D-201ENST00000216099 SLC27A3Q5K4L6 730 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 PPP2R2DQ66LE6 453 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 KRBA2Q6ZNG9 492 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 SMIM5Q71RC9 77 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 NEDD4P46934 1319 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 IRS2Q9Y4H2 1338 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 CDK5RAP2Q96SN8 1893 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 FDPSP14324 419 aaKnown RBP12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 CYP7A1P22680 504 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 LIFRP42702 1097 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 SLC4A4Q9Y6R1 1079 aa12.3□□□□□ -0.44
APOBEC3D-201ENST00000216099 WDHD1O75717 1129 aaPredicted RBP12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 CCDC181Q5TID7 509 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 FAM196AQ6ZSG2 479 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 IGDCC4Q8TDY8 1250 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 RNF41Q9H4P4 317 aaPredicted RBP12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 NRXN2Q9P2S2 1712 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 LTBP1Q14766 1721 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 MAGEB6P1A0A0J9YX57 407 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 B4E1Z4 1266 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 CDKL5O76039 1030 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 ATP2B1P20020 1258 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 ADD1P35611 737 aaKnown RBP12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 FAM173BQ6P4H8 233 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 VPS37DQ86XT2 251 aa12.29□□□□□ -0.44
APOBEC3D-201ENST00000216099 NAV1Q8NEY1 1877 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms