RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 ZSCAN26Q16670 478 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 MFSD14BQ5SR56 506 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 RBM26Q5T8P6 1007 aaKnown RBP14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 CDCA7Q9BWT1 371 aaPredicted RBP14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 CNNM2Q9H8M5 875 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 LTN1O94822 1766 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 ZNF804BA4D1E1 1349 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 NWD1Q149M9 1564 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 USP17L3A6NCW0 530 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 USP17L4A6NCW7 530 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 FAM205CA6NFA0 338 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 MECOMQ03112 1051 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 ENOX2Q16206 610 aaKnown RBP14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 SOGA3Q5TF21 947 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 USP17L1Q7RTZ2 530 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 ANKRD20A12PQ8NF67 263 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 ZNF274Q96GC6 653 aaPredicted RBP14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 NYXQ9GZU5 481 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 UBA5Q9GZZ9 404 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 CPDO75976 1380 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 CTAGE5O15320 804 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 PLEKHA8P1O95397 391 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 UBE3CQ15386 1083 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 KCNG4Q8TDN1 519 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 ERO1AQ96HE7 468 aa14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 SCAF8Q9UPN6 1271 aaKnown RBP14.72□□□□□ -0.05
PCDHB4-201ENST00000194152 GSG1L2A8MUP6 293 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 ERVV-1B6SEH8 477 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 SEC31AO94979 1220 aaKnown RBP14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 KIAA0825Q8IV33 1275 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 ZNF34Q8IZ26 560 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 TXLNBQ8N3L3 684 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 NKX2-3Q8TAU0 364 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 OXER1Q8TDS5 423 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 WASF1Q92558 559 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 MXD3Q9BW11 206 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 EPB41L4AQ9HCS5 686 aaPredicted RBP14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 BAG3O95817 575 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 PFKFB1P16118 471 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 FANCBQ8NB91 859 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 BLZF1Q9H2G9 400 aa14.71□□□□□ -0.05
PCDHB4-201ENST00000194152 DPCR1Q3MIW9 517 aa14.71□□□□□ -0.06
PCDHB4-201ENST00000194152 CLEC10AQ8IUN9 316 aa14.71□□□□□ -0.06
PCDHB4-201ENST00000194152 RGS22Q8NE09 1264 aa14.71□□□□□ -0.06
PCDHB4-201ENST00000194152 DNAI1Q9UI46 699 aa14.71□□□□□ -0.06
PCDHB4-201ENST00000194152 ZYXQ15942 572 aaKnown RBP14.7□□□□□ -0.06
PCDHB4-201ENST00000194152 ADGRA1Q86SQ6 560 aa14.7□□□□□ -0.06
PCDHB4-201ENST00000194152 FDPSP14324 419 aaKnown RBP14.7□□□□□ -0.06
PCDHB4-201ENST00000194152 SMYD4Q8IYR2 804 aaPredicted RBP14.7□□□□□ -0.06
PCDHB4-201ENST00000194152 FAM84BQ96KN1 310 aaPredicted RBP14.7□□□□□ -0.06
PCDHB4-201ENST00000194152 TOP1P11387 765 aaKnown RBP14.7□□□□□ -0.06
PCDHB4-201ENST00000194152 ZNF75DP51815 510 aa14.7□□□□□ -0.06
PCDHB4-201ENST00000194152 TRIM28Q13263 835 aaKnown RBP14.7□□□□□ -0.06
PCDHB4-201ENST00000194152 DBNDD1Q9H9R9 158 aa14.7□□□□□ -0.06
PCDHB4-201ENST00000194152 AFF2P51816 1311 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 IDEP14735 1019 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 MB21D2Q8IYB1 491 aaPredicted RBP14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 LLPHQ9BRT6 129 aaKnown RBP14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 FRMPD2Q68DX3 1309 aaPredicted RBP14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 TRIM75PA6NK02 468 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 TMEM87BQ96K49 555 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 PXDNLA1KZ92 1463 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 FMN2Q9NZ56 1722 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 MYO1CO00159 1063 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 PHACTR2O75167 634 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 SERPINB2P05120 415 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 HSPA1LP34931 641 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 RBM6P78332 1123 aaKnown RBP14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 JAKMIP3Q5VZ66 844 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 LRRC47Q8N1G4 583 aaKnown RBP14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 KCNH3Q9ULD8 1083 aa14.69□□□□□ -0.06
PCDHB4-201ENST00000194152 SH2B2O14492 632 aaPredicted RBP14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 FOXN1O15353 648 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 SLURP2P0DP57 97 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 EXOSC10Q01780 885 aaKnown RBP14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 ZNF804AQ7Z570 1209 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 IPO7O95373 1038 aaKnown RBP14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 NTSR2O95665 410 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 MCM6Q14566 821 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 PPFIBP1Q86W92 1011 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 GGA1Q9UJY5 639 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 ECM2O94769 699 aaPredicted RBP14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 OAS2P29728 719 aaKnown RBP14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 KIF23Q02241 960 aaPredicted RBP14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 LETM2Q2VYF4 491 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 SERTAD1Q9UHV2 236 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 PCDHB6Q9Y5E3 794 aa14.68□□□□□ -0.06
PCDHB4-201ENST00000194152 MED1Q15648 1581 aaPredicted RBP14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 CLCN6P51797 869 aa14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 UBASH3AP57075 661 aa14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 SMARCE1Q969G3 411 aa14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 CDK5RAP3Q96JB5 506 aa14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 EPC1Q9H2F5 836 aa14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 NAPAP54920 295 aa14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 SEC63Q9UGP8 760 aaKnown RBP14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 EPB41L2O43491 1005 aaKnown RBP14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 MYCNP04198 464 aaPredicted RBP14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 GNAT2P19087 354 aa14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 CCDC144BQ3MJ40 725 aa14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 FILIP1LQ4L180 1135 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms