RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 ARHGEF6Q15052 776 aa33.92■■■■□ 3.02
PDCD2-201ENST00000167218 AS3MTQ9HBK9 375 aa33.92■■■■□ 3.02
PDCD2-201ENST00000167218 DCP1AQ9NPI6 582 aaPredicted RBP33.92■■■■□ 3.02
PDCD2-201ENST00000167218 HMGCS2P54868 508 aa33.91■■■■□ 3.02
PDCD2-201ENST00000167218 EVX2Q03828 476 aa33.91■■■■□ 3.02
PDCD2-201ENST00000167218 GPATCH3Q96I76 525 aa33.91■■■■□ 3.02
PDCD2-201ENST00000167218 MBD4O95243 580 aa33.9■■■■□ 3.02
PDCD2-201ENST00000167218 GABPAQ06546 454 aa33.9■■■■□ 3.02
PDCD2-201ENST00000167218 PRKAB2O43741 272 aa33.89■■■■□ 3.02
PDCD2-201ENST00000167218 KIF22Q14807 665 aa33.89■■■■□ 3.02
PDCD2-201ENST00000167218 OTUD7AQ8TE49 926 aaPredicted RBP33.89■■■■□ 3.02
PDCD2-201ENST00000167218 MCM9Q9NXL9 1143 aa33.89■■■■□ 3.02
PDCD2-201ENST00000167218 BAZ2AQ9UIF9 1905 aaKnown RBP33.89■■■■□ 3.02
PDCD2-201ENST00000167218 POLR3DP05423 398 aaPredicted RBP33.88■■■■□ 3.01
PDCD2-201ENST00000167218 SHMT1P34896 483 aa33.88■■■■□ 3.01
PDCD2-201ENST00000167218 BACE1P56817 501 aa33.88■■■■□ 3.01
PDCD2-201ENST00000167218 HDAC1Q13547 482 aaPredicted RBP33.88■■■■□ 3.01
PDCD2-201ENST00000167218 ZSCAN25Q6NSZ9 544 aa33.88■■■■□ 3.01
PDCD2-201ENST00000167218 KBTBD3Q8NAB2 608 aa33.88■■■■□ 3.01
PDCD2-201ENST00000167218 GH2P01242 217 aa33.87■■■■□ 3.01
PDCD2-201ENST00000167218 PUS7LQ9H0K6 701 aaKnown RBP33.87■■■■□ 3.01
PDCD2-201ENST00000167218 TTC41PQ6P2S7 1318 aa33.86■■■■□ 3.01
PDCD2-201ENST00000167218 GNRH1P01148 92 aa33.86■■■■□ 3.01
PDCD2-201ENST00000167218 MTMR2Q13614 643 aa33.86■■■■□ 3.01
PDCD2-201ENST00000167218 PI4K2BQ8TCG2 481 aa33.86■■■■□ 3.01
PDCD2-201ENST00000167218 TRIM47Q96LD4 638 aa33.86■■■■□ 3.01
PDCD2-201ENST00000167218 PTCH2Q9Y6C5 1203 aa33.86■■■■□ 3.01
PDCD2-201ENST00000167218 MGAMO43451 1857 aa33.86■■■■□ 3.01
PDCD2-201ENST00000167218 KIAA0100Q14667 2235 aaKnown RBP33.85■■■■□ 3.01
PDCD2-201ENST00000167218 PSMC4P43686 418 aa33.85■■■■□ 3.01
PDCD2-201ENST00000167218 ARMC5Q96C12 935 aa33.85■■■■□ 3.01
PDCD2-201ENST00000167218 ATP8A2Q9NTI2 1148 aa33.85■■■■□ 3.01
PDCD2-201ENST00000167218 SALL3Q9BXA9 1300 aa33.84■■■■□ 3.01
PDCD2-201ENST00000167218 ECM2O94769 699 aaPredicted RBP33.84■■■■□ 3.01
PDCD2-201ENST00000167218 CYP2D6P10635 497 aa33.84■■■■□ 3.01
PDCD2-201ENST00000167218 AAMPQ13685 434 aa33.84■■■■□ 3.01
PDCD2-201ENST00000167218 CERKLQ49MI3 558 aaPredicted RBP33.84■■■■□ 3.01
PDCD2-201ENST00000167218 C19orf81C9J6K1 198 aa33.83■■■■□ 3.01
PDCD2-201ENST00000167218 USP17L10C9JJH3 530 aa33.83■■■■□ 3.01
PDCD2-201ENST00000167218 MLLT1Q03111 559 aaPredicted RBP33.83■■■■□ 3.01
PDCD2-201ENST00000167218 PNMA3Q9UL41 463 aa33.83■■■■□ 3.01
PDCD2-201ENST00000167218 BRCA2P51587 3418 aa33.83■■■■□ 3.01
PDCD2-201ENST00000167218 SMCR8Q8TEV9 937 aaPredicted RBP33.82■■■■□ 3
PDCD2-201ENST00000167218 GCC1Q96CN9 775 aa33.82■■■■□ 3
PDCD2-201ENST00000167218 ABCB5Q2M3G0 1257 aa33.81■■■■□ 3
PDCD2-201ENST00000167218 ASCC2Q9H1I8 757 aaPredicted RBP33.81■■■■□ 3
PDCD2-201ENST00000167218 DOCK3Q8IZD9 2030 aa33.8■■■■□ 3
PDCD2-201ENST00000167218 TNRC18O15417 2968 aaPredicted RBP33.8■■■■□ 3
PDCD2-201ENST00000167218 OSBPP22059 807 aa33.8■■■■□ 3
PDCD2-201ENST00000167218 GUCY1A2P33402 732 aa33.8■■■■□ 3
PDCD2-201ENST00000167218 PRMT2P55345 433 aa33.8■■■■□ 3
PDCD2-201ENST00000167218 PABPC4Q13310 644 aaKnown RBP eCLIP33.8■■■■□ 33e-7■■□□□ 11.7
PDCD2-201ENST00000167218 ANKRD45Q5TZF3 282 aa33.8■■■■□ 3
PDCD2-201ENST00000167218 OSBP2Q969R2 916 aa33.8■■■■□ 3
PDCD2-201ENST00000167218 EMILIN3Q9NT22 766 aa33.8■■■■□ 3
PDCD2-201ENST00000167218 SRRDQ9UH36 339 aa33.8■■■■□ 3
PDCD2-201ENST00000167218 SLC4A4Q9Y6R1 1079 aa33.8■■■■□ 3
PDCD2-201ENST00000167218 SMIM22K7EJ46 135 aa33.79■■■■□ 3
PDCD2-201ENST00000167218 ERC2O15083 957 aa33.79■■■■□ 3
PDCD2-201ENST00000167218 GLRX3O76003 335 aaKnown RBP33.79■■■■□ 3
PDCD2-201ENST00000167218 FMNL1O95466 1100 aaPredicted RBP33.79■■■■□ 3
PDCD2-201ENST00000167218 MX1P20591 662 aa33.79■■■■□ 3
PDCD2-201ENST00000167218 HOXA7P31268 230 aaPredicted RBP33.79■■■■□ 3
PDCD2-201ENST00000167218 STRBPQ96SI9 672 aaKnown RBP33.79■■■■□ 3
PDCD2-201ENST00000167218 TMOD4Q9NZQ9 345 aa33.79■■■■□ 3
PDCD2-201ENST00000167218 RNF113AO15541 343 aaKnown RBP33.78■■■■□ 3
PDCD2-201ENST00000167218 C12orf60Q5U649 245 aa33.78■■■■□ 3
PDCD2-201ENST00000167218 ANKRD13CQ8N6S4 541 aa33.78■■■■□ 3
PDCD2-201ENST00000167218 SLC44A5Q8NCS7 719 aa33.78■■■■□ 3
PDCD2-201ENST00000167218 APPBP2Q92624 585 aa33.78■■■■□ 3
PDCD2-201ENST00000167218 USP17L12C9JPN9 530 aa33.77■■■■□ 3
PDCD2-201ENST00000167218 USP17L21D6R901 530 aa33.77■■■■□ 3
PDCD2-201ENST00000167218 RAB3GAP1Q15042 981 aa33.77■■■■□ 3
PDCD2-201ENST00000167218 EXOC6Q8TAG9 804 aa33.77■■■■□ 3
PDCD2-201ENST00000167218 DYNLL2Q96FJ2 89 aa33.77■■■■□ 3
PDCD2-201ENST00000167218 ZNF333Q96JL9 665 aa33.77■■■■□ 3
PDCD2-201ENST00000167218 TAOK2Q9UL54 1235 aa33.77■■■■□ 3
PDCD2-201ENST00000167218 MYH8P13535 1937 aa33.77■■■■□ 3
PDCD2-201ENST00000167218 CYP2D7A0A087X1C5 515 aa33.76■■■□□ 2.99
PDCD2-201ENST00000167218 ZFYP08048 801 aaPredicted RBP33.76■■■□□ 2.99
PDCD2-201ENST00000167218 HOXD10P28358 340 aa33.76■■■□□ 2.99
PDCD2-201ENST00000167218 FCGRTP55899 365 aa33.76■■■□□ 2.99
PDCD2-201ENST00000167218 FAM110CQ1W6H9 321 aa33.76■■■□□ 2.99
PDCD2-201ENST00000167218 ACER1Q8TDN7 264 aa33.76■■■□□ 2.99
PDCD2-201ENST00000167218 CABP5Q9NP86 173 aa33.76■■■□□ 2.99
PDCD2-201ENST00000167218 SWAP70Q9UH65 585 aa33.76■■■□□ 2.99
PDCD2-201ENST00000167218 GCLCP48506 637 aaPredicted RBP33.75■■■□□ 2.99
PDCD2-201ENST00000167218 SLC9C1Q4G0N8 1177 aa33.75■■■□□ 2.99
PDCD2-201ENST00000167218 USP17L2Q6R6M4 530 aa33.75■■■□□ 2.99
PDCD2-201ENST00000167218 C12orf42Q96LP6 360 aa33.75■■■□□ 2.99
PDCD2-201ENST00000167218 SEPT2Q15019 361 aa33.74■■■□□ 2.99
PDCD2-201ENST00000167218 CTR9Q6PD62 1173 aa33.74■■■□□ 2.99
PDCD2-201ENST00000167218 RBBP6Q7Z6E9 1792 aaKnown RBP33.74■■■□□ 2.99
PDCD2-201ENST00000167218 GSG1L2A8MUP6 293 aa33.73■■■□□ 2.99
PDCD2-201ENST00000167218 P2RX7Q99572 595 aaKnown RBP33.73■■■□□ 2.99
PDCD2-201ENST00000167218 KIAA1683Q9H0B3 1180 aa33.73■■■□□ 2.99
PDCD2-201ENST00000167218 STAP2Q9UGK3 403 aa33.73■■■□□ 2.99
PDCD2-201ENST00000167218 SUPT16HQ9Y5B9 1047 aaKnown RBP33.73■■■□□ 2.99
PDCD2-201ENST00000167218 MYPNQ86TC9 1320 aa33.73■■■□□ 2.99
PDCD2-201ENST00000167218 POTEFA5A3E0 1075 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms