RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 PPP2R3AQ06190 1150 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 SPOPO43791 374 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 SORBS3O60504 671 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 BRD1O95696 1058 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 ZNF827Q17R98 1081 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 CCDC77Q9BR77 488 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 MAST3O60307 1309 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 VAV2P52735 878 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 CHRNDQ07001 517 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 KRT25Q7Z3Z0 450 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 CABP7Q86V35 215 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 EEF2KMTQ96G04 330 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 TNFAIP3P21580 790 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 SMTNP53814 917 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 MTX1Q13505 466 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 ADCK5Q3MIX3 580 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 MYCT1Q8N699 235 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 MAGI3Q5TCQ9 1506 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 RASEFQ8IZ41 740 aa21.05■□□□□ 0.96
MBD3-201ENST00000156825 DBNLQ9UJU6 430 aaKnown RBP21.05■□□□□ 0.96
MBD3-201ENST00000156825 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.05■□□□□ 0.96
MBD3-201ENST00000156825 GPKOWQ92917 476 aaPredicted RBP eCLIP21.05■□□□□ 0.96
MBD3-201ENST00000156825 LOC102724428A0A0B4J2F2 783 aa21.05■□□□□ 0.96
MBD3-201ENST00000156825 SIK1P57059 783 aa21.05■□□□□ 0.96
MBD3-201ENST00000156825 UTP14CQ5TAP6 766 aaKnown RBP21.05■□□□□ 0.96
MBD3-201ENST00000156825 GIGYF2Q6Y7W6 1299 aaKnown RBP21.05■□□□□ 0.96
MBD3-201ENST00000156825 MLKLQ8NB16 471 aa21.05■□□□□ 0.96
MBD3-201ENST00000156825 FBF1Q8TES7 1133 aa21.05■□□□□ 0.96
MBD3-201ENST00000156825 IPO4Q8TEX9 1081 aaKnown RBP21.05■□□□□ 0.96
MBD3-201ENST00000156825 MRRFQ96E11 262 aaKnown RBP21.05■□□□□ 0.96
MBD3-201ENST00000156825 NOP56O00567 594 aaKnown RBP21.05■□□□□ 0.96
MBD3-201ENST00000156825 WDR44Q5JSH3 913 aa21.05■□□□□ 0.96
MBD3-201ENST00000156825 NAP1L4Q99733 375 aaKnown RBP21.05■□□□□ 0.96
MBD3-201ENST00000156825 TRIM31Q9BZY9 425 aa21.05■□□□□ 0.96
MBD3-201ENST00000156825 TNKSO95271 1327 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 NR1I2O75469 434 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 KIF4AO95239 1232 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 NLRP12P59046 1061 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 TM6SF1Q9BZW5 370 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 DNM3Q9UQ16 869 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 GCNT3O95395 438 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.04■□□□□ 0.96
MBD3-201ENST00000156825 INSRP06213 1382 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 BTBD18B2RXH4 712 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 ATP2A1O14983 1001 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 IRX5P78411 483 aaPredicted RBP21.04■□□□□ 0.96
MBD3-201ENST00000156825 HS1BP3Q53T59 392 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 NLRC4Q9NPP4 1024 aa21.04■□□□□ 0.96
MBD3-201ENST00000156825 FAM207AQ9NSI2 230 aaPredicted RBP21.04■□□□□ 0.96
MBD3-201ENST00000156825 TMEM94Q12767 1356 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 PI16Q6UXB8 463 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 TPH2Q8IWU9 490 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 NELFBQ8WX92 580 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 HAUS7Q99871 368 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 PLEKHA4Q9H4M7 779 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 CARD6Q9BX69 1037 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 RRAGDQ9NQL2 400 aaPredicted RBP21.03■□□□□ 0.96
MBD3-201ENST00000156825 GTPBP4Q9BZE4 634 aaKnown RBP21.03■□□□□ 0.96
MBD3-201ENST00000156825 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 SLF1Q9BQI6 1058 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 KCNK9Q9NPC2 374 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 BCS1LQ9Y276 419 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 OPA1O60313 960 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 EXOC3O60645 756 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 PCCAP05165 728 aaPredicted RBP21.03■□□□□ 0.96
MBD3-201ENST00000156825 INF2Q27J81 1249 aa21.03■□□□□ 0.96
MBD3-201ENST00000156825 TCP10L2B9ZVM9 353 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 MXRA7P84157 204 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 PLCD3Q8N3E9 789 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 TEKT1Q969V4 418 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 CLIC6Q96NY7 704 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.02■□□□□ 0.968e-11■■■■□ 21.9
MBD3-201ENST00000156825 FANCBQ8NB91 859 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 UBLCP1Q8WVY7 318 aaPredicted RBP21.02■□□□□ 0.96
MBD3-201ENST00000156825 ZSCAN10Q96SZ4 725 aaPredicted RBP21.02■□□□□ 0.96
MBD3-201ENST00000156825 SEC31BQ9NQW1 1179 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 PFKFB1P16118 471 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 CRKLP46109 303 aaKnown RBP21.02■□□□□ 0.96
MBD3-201ENST00000156825 NIM1KQ8IY84 436 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 PNMA1Q8ND90 353 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 IFT74Q96LB3 600 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 ANTXR1Q9H6X2 564 aa21.02■□□□□ 0.96
MBD3-201ENST00000156825 MRPL44Q9H9J2 332 aaKnown RBP21.02■□□□□ 0.96
MBD3-201ENST00000156825 TBC1D22AQ8WUA7 517 aa21.02■□□□□ 0.95
MBD3-201ENST00000156825 ADKP55263 362 aaKnown RBP21.01■□□□□ 0.95
MBD3-201ENST00000156825 TNNC1P63316 161 aa21.01■□□□□ 0.95
MBD3-201ENST00000156825 LRMPQ12912 555 aa21.01■□□□□ 0.95
MBD3-201ENST00000156825 CALCOCO2Q13137 446 aa21.01■□□□□ 0.95
MBD3-201ENST00000156825 XPO4Q9C0E2 1151 aaKnown RBP21.01■□□□□ 0.95
MBD3-201ENST00000156825 IVNS1ABPQ9Y6Y0 642 aa21.01■□□□□ 0.95
MBD3-201ENST00000156825 TECP42680 631 aa21.01■□□□□ 0.95
MBD3-201ENST00000156825 MTMR6Q9Y217 621 aa21.01■□□□□ 0.95
MBD3-201ENST00000156825 PCDHB13Q9Y5F0 798 aa21.01■□□□□ 0.95
MBD3-201ENST00000156825 PROCA1Q8NCQ7 364 aaPredicted RBP21■□□□□ 0.95
MBD3-201ENST00000156825 JAKMIP2Q96AA8 810 aa21■□□□□ 0.95
MBD3-201ENST00000156825 ARPP21Q9UBL0 812 aaPredicted RBP21■□□□□ 0.95
MBD3-201ENST00000156825 PABPN1LA6NDY0 278 aaKnown RBP21■□□□□ 0.95
MBD3-201ENST00000156825 ZBTB16Q05516 673 aa21■□□□□ 0.95
MBD3-201ENST00000156825 ARHGEF25Q86VW2 580 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms